RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 RAB3GAP2Q9H2M9 1393 aa26.39■■□□□ 1.81
CCDC188-201ENST00000439765 DISP3Q9P2K9 1392 aa26.38■■□□□ 1.81
CCDC188-201ENST00000439765 ZFYVE9O95405 1425 aa26.37■■□□□ 1.81
CCDC188-201ENST00000439765 TRIM26Q12899 539 aaPredicted RBP26.36■■□□□ 1.81
CCDC188-201ENST00000439765 TRPM2O94759 1503 aa26.36■■□□□ 1.81
CCDC188-201ENST00000439765 CLTCL1P53675 1640 aa26.36■■□□□ 1.81
CCDC188-201ENST00000439765 SLC4A1APQ9BWU0 796 aaKnown RBP26.36■■□□□ 1.81
CCDC188-201ENST00000439765 NWD1Q149M9 1564 aa26.35■■□□□ 1.81
CCDC188-201ENST00000439765 PIP4K2BP78356 416 aa26.33■■□□□ 1.81
CCDC188-201ENST00000439765 CHD2O14647 1828 aaKnown RBP26.32■■□□□ 1.8
CCDC188-201ENST00000439765 SCAF1Q9H7N4 1312 aaKnown RBP26.32■■□□□ 1.8
CCDC188-201ENST00000439765 KIF1BO60333 1816 aa26.31■■□□□ 1.8
CCDC188-201ENST00000439765 RIMS2Q9UQ26 1411 aa26.3■■□□□ 1.8
CCDC188-201ENST00000439765 PLEKHG1Q9ULL1 1385 aa26.29■■□□□ 1.8
CCDC188-201ENST00000439765 HSPA1LP34931 641 aa26.29■■□□□ 1.8
CCDC188-201ENST00000439765 NKTRP30414 1462 aaKnown RBP26.28■■□□□ 1.8
CCDC188-201ENST00000439765 CHGAP10645 457 aaKnown RBP26.27■■□□□ 1.8
CCDC188-201ENST00000439765 KCNA6P17658 529 aa26.27■■□□□ 1.8
CCDC188-201ENST00000439765 SLC26A8Q96RN1 970 aa26.27■■□□□ 1.8
CCDC188-201ENST00000439765 HDGFP51858 240 aaKnown RBP26.25■■□□□ 1.79
CCDC188-201ENST00000439765 FOXD1Q16676 465 aa26.25■■□□□ 1.79
CCDC188-201ENST00000439765 MPHOSPH9Q99550 1183 aa26.24■■□□□ 1.79
CCDC188-201ENST00000439765 DIP2AQ14689 1571 aa26.22■■□□□ 1.79
CCDC188-201ENST00000439765 TMEM94Q12767 1356 aa26.22■■□□□ 1.79
CCDC188-201ENST00000439765 ACIN1Q9UKV3 1341 aaKnown RBP26.21■■□□□ 1.79
CCDC188-201ENST00000439765 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.2■■□□□ 1.78
CCDC188-201ENST00000439765 MED1Q15648 1581 aaPredicted RBP26.2■■□□□ 1.78
CCDC188-201ENST00000439765 PPP1R15AO75807 674 aaPredicted RBP26.19■■□□□ 1.78
CCDC188-201ENST00000439765 ILDR2Q71H61 639 aa26.19■■□□□ 1.78
CCDC188-201ENST00000439765 BCANQ96GW7 911 aa26.17■■□□□ 1.78
CCDC188-201ENST00000439765 ADAMTS13Q76LX8 1427 aa26.17■■□□□ 1.78
CCDC188-201ENST00000439765 TBX22Q9Y458 520 aa26.15■■□□□ 1.78
CCDC188-201ENST00000439765 PROSER2Q86WR7 435 aaPredicted RBP26.14■■□□□ 1.78
CCDC188-201ENST00000439765 PCGF6Q9BYE7 350 aa26.14■■□□□ 1.78
CCDC188-201ENST00000439765 SENP3Q9H4L4 574 aaPredicted RBP26.14■■□□□ 1.78
CCDC188-201ENST00000439765 CCDC144AA2RUR9 1427 aa26.13■■□□□ 1.77
CCDC188-201ENST00000439765 NEXMIFQ5QGS0 1516 aa26.13■■□□□ 1.77
CCDC188-201ENST00000439765 NRXN3Q9Y4C0 1643 aa26.13■■□□□ 1.77
CCDC188-201ENST00000439765 NUTM2DQ5VT03 806 aaPredicted RBP26.12■■□□□ 1.77
CCDC188-201ENST00000439765 ROBO1Q9Y6N7 1651 aa26.12■■□□□ 1.77
CCDC188-201ENST00000439765 FAM135BQ49AJ0 1406 aa26.12■■□□□ 1.77
CCDC188-201ENST00000439765 PIK3R4Q99570 1358 aa26.11■■□□□ 1.77
CCDC188-201ENST00000439765 ZNF326Q5BKZ1 582 aaKnown RBP26.11■■□□□ 1.77
CCDC188-201ENST00000439765 SETBP1Q9Y6X0 1596 aa26.1■■□□□ 1.77
CCDC188-201ENST00000439765 PPLO60437 1756 aa26.1■■□□□ 1.77
CCDC188-201ENST00000439765 HRCP23327 699 aa26.09■■□□□ 1.77
CCDC188-201ENST00000439765 MSH6P52701 1360 aa26.07■■□□□ 1.76
CCDC188-201ENST00000439765 NCOA3Q9Y6Q9 1424 aa26.07■■□□□ 1.76
CCDC188-201ENST00000439765 RBM33Q96EV2 1170 aaKnown RBP26.06■■□□□ 1.76
CCDC188-201ENST00000439765 IFT172Q9UG01 1749 aa26.06■■□□□ 1.76
CCDC188-201ENST00000439765 XRN1Q8IZH2 1706 aaKnown RBP26.05■■□□□ 1.76
CCDC188-201ENST00000439765 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.03■■□□□ 1.76
CCDC188-201ENST00000439765 SOCS7O14512 581 aa26.03■■□□□ 1.76
CCDC188-201ENST00000439765 SPATA31E1Q6ZUB1 1445 aa26.01■■□□□ 1.75
CCDC188-201ENST00000439765 PTPRUQ92729 1446 aa25.99■■□□□ 1.75
CCDC188-201ENST00000439765 ANKRD30BQ9BXX2 1392 aa25.98■■□□□ 1.75
CCDC188-201ENST00000439765 PHLPP1O60346 1717 aa25.97■■□□□ 1.75
CCDC188-201ENST00000439765 SETD1AO15047 1707 aaKnown RBP25.97■■□□□ 1.75
CCDC188-201ENST00000439765 RGL3Q3MIN7 710 aa25.94■■□□□ 1.74
CCDC188-201ENST00000439765 SLAIN2Q9P270 581 aa25.94■■□□□ 1.74
CCDC188-201ENST00000439765 AMOTL2Q9Y2J4 779 aa25.93■■□□□ 1.74
CCDC188-201ENST00000439765 RPGRIP1LQ68CZ1 1315 aa25.91■■□□□ 1.74
CCDC188-201ENST00000439765 C19orf44Q9H6X5 657 aa25.91■■□□□ 1.74
CCDC188-201ENST00000439765 METP08581 1390 aa25.9■■□□□ 1.74
CCDC188-201ENST00000439765 COL16A1Q07092 1604 aaPredicted RBP25.89■■□□□ 1.74
CCDC188-201ENST00000439765 DCCP43146 1447 aa25.89■■□□□ 1.74
CCDC188-201ENST00000439765 C14orf37Q86TY3 774 aa25.89■■□□□ 1.73
CCDC188-201ENST00000439765 CADPS2Q86UW7 1296 aa25.88■■□□□ 1.73
CCDC188-201ENST00000439765 PHF23Q9BUL5 403 aaPredicted RBP25.88■■□□□ 1.73
CCDC188-201ENST00000439765 VGFO15240 615 aaPredicted RBP25.87■■□□□ 1.73
CCDC188-201ENST00000439765 AHDC1Q5TGY3 1603 aaPredicted RBP25.86■■□□□ 1.73
CCDC188-201ENST00000439765 NALCNQ8IZF0 1738 aa25.86■■□□□ 1.73
CCDC188-201ENST00000439765 ATF3P18847 181 aa25.83■■□□□ 1.73
CCDC188-201ENST00000439765 ADGRF5Q8IZF2 1346 aa25.83■■□□□ 1.73
CCDC188-201ENST00000439765 PRAG1Q86YV5 1406 aa25.82■■□□□ 1.72
CCDC188-201ENST00000439765 MYOM2P54296 1465 aa25.82■■□□□ 1.72
CCDC188-201ENST00000439765 ADGRL3Q9HAR2 1447 aa25.8■■□□□ 1.72
CCDC188-201ENST00000439765 DHX57Q6P158 1386 aaKnown RBP25.79■■□□□ 1.72
CCDC188-201ENST00000439765 PIK3C2GO75747 1445 aa25.79■■□□□ 1.72
CCDC188-201ENST00000439765 PTCH1Q13635 1447 aa25.79■■□□□ 1.72
CCDC188-201ENST00000439765 SHPRHQ149N8 1683 aa25.79■■□□□ 1.72
CCDC188-201ENST00000439765 NHSL1Q5SYE7 1610 aa25.79■■□□□ 1.72
CCDC188-201ENST00000439765 JCADQ9P266 1359 aa25.79■■□□□ 1.72
CCDC188-201ENST00000439765 LAMC1P11047 1609 aa25.78■■□□□ 1.72
CCDC188-201ENST00000439765 MST1RQ04912 1400 aa25.77■■□□□ 1.72
CCDC188-201ENST00000439765 NRXN1Q9ULB1 1477 aa25.76■■□□□ 1.71
CCDC188-201ENST00000439765 RGS17Q9UGC6 210 aaPredicted RBP25.75■■□□□ 1.71
CCDC188-201ENST00000439765 ASXL1Q8IXJ9 1541 aa25.75■■□□□ 1.71
CCDC188-201ENST00000439765 BRINP3Q76B58 766 aa25.72■■□□□ 1.71
CCDC188-201ENST00000439765 KNDC1Q76NI1 1749 aa25.7■■□□□ 1.71
CCDC188-201ENST00000439765 DCAF11Q8TEB1 546 aa25.69■■□□□ 1.7
CCDC188-201ENST00000439765 ROBO2Q9HCK4 1378 aa25.69■■□□□ 1.7
CCDC188-201ENST00000439765 KDM2AQ9Y2K7 1162 aa25.68■■□□□ 1.7
CCDC188-201ENST00000439765 SPATA31A6Q5VVP1 1343 aa25.67■■□□□ 1.7
CCDC188-201ENST00000439765 LRP6O75581 1613 aa25.65■■□□□ 1.7
CCDC188-201ENST00000439765 SIN3AQ96ST3 1273 aa25.65■■□□□ 1.7
CCDC188-201ENST00000439765 TECPR2O15040 1411 aa25.62■■□□□ 1.69
CCDC188-201ENST00000439765 C1orf167Q5SNV9 1468 aa25.62■■□□□ 1.69
CCDC188-201ENST00000439765 CFAP70Q5T0N1 1121 aa25.62■■□□□ 1.69
CCDC188-201ENST00000439765 TMEM132EQ6IEE7 984 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms