RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 CHGAP10645 457 aaKnown RBP23.24■■□□□ 1.31
GSE1-206ENST00000438180 CLTCQ00610 1675 aaKnown RBP23.24■■□□□ 1.31
GSE1-206ENST00000438180 YTHDC1Q96MU7 727 aaKnown RBP23.22■■□□□ 1.31
GSE1-206ENST00000438180 SCAF11Q99590 1463 aaKnown RBP23.22■■□□□ 1.31
GSE1-206ENST00000438180 EIF3AQ14152 1382 aaKnown RBP23.21■■□□□ 1.31
GSE1-206ENST00000438180 ERVK-7P63135 1459 aa23.21■■□□□ 1.31
GSE1-206ENST00000438180 ESF1Q9H501 851 aaKnown RBP23.17■■□□□ 1.3
GSE1-206ENST00000438180 SETBP1Q9Y6X0 1596 aa23.17■■□□□ 1.3
GSE1-206ENST00000438180 ADGRF5Q8IZF2 1346 aa23.17■■□□□ 1.3
GSE1-206ENST00000438180 SPATA31D1Q6ZQQ2 1576 aa23.16■■□□□ 1.3
GSE1-206ENST00000438180 PIK3C2GO75747 1445 aa23.15■■□□□ 1.3
GSE1-206ENST00000438180 SLC24A1O60721 1099 aa23.15■■□□□ 1.3
GSE1-206ENST00000438180 POLR3GLQ9BT43 218 aa23.15■■□□□ 1.3
GSE1-206ENST00000438180 NEXMIFQ5QGS0 1516 aa23.14■■□□□ 1.3
GSE1-206ENST00000438180 TRHP20396 242 aaPredicted RBP23.14■■□□□ 1.3
GSE1-206ENST00000438180 TMF1P82094 1093 aa23.14■■□□□ 1.3
GSE1-206ENST00000438180 IDI1Q13907 227 aa23.14■■□□□ 1.3
GSE1-206ENST00000438180 VGFO15240 615 aaPredicted RBP23.13■■□□□ 1.29
GSE1-206ENST00000438180 TMEM131LA2VDJ0 1609 aa23.13■■□□□ 1.29
GSE1-206ENST00000438180 ZFYVE9O95405 1425 aa23.12■■□□□ 1.29
GSE1-206ENST00000438180 TESK2Q96S53 571 aa23.12■■□□□ 1.29
GSE1-206ENST00000438180 MLECQ14165 292 aa23.11■■□□□ 1.29
GSE1-206ENST00000438180 CFAP70Q5T0N1 1121 aa23.1■■□□□ 1.29
GSE1-206ENST00000438180 CDCA8Q53HL2 280 aa23.09■■□□□ 1.29
GSE1-206ENST00000438180 MYO5BQ9ULV0 1848 aa23.08■■□□□ 1.29
GSE1-206ENST00000438180 PRKRIP1Q9H875 184 aaPredicted RBP23.08■■□□□ 1.28
GSE1-206ENST00000438180 C14orf93Q9H972 538 aaKnown RBP23.08■■□□□ 1.28
GSE1-206ENST00000438180 FBXO31Q5XUX0 539 aaPredicted RBP23.07■■□□□ 1.28
GSE1-206ENST00000438180 MYO3AQ8NEV4 1616 aa23.06■■□□□ 1.28
GSE1-206ENST00000438180 DNAJC5Q9H3Z4 198 aa23.05■■□□□ 1.28
GSE1-206ENST00000438180 ZMYM3Q14202 1370 aa23.05■■□□□ 1.28
GSE1-206ENST00000438180 DISP3Q9P2K9 1392 aa23.05■■□□□ 1.28
GSE1-206ENST00000438180 STAG3Q9UJ98 1225 aa23.04■■□□□ 1.28
GSE1-206ENST00000438180 KTN1Q86UP2 1357 aaKnown RBP23.02■■□□□ 1.28
GSE1-206ENST00000438180 ADGRB1O14514 1584 aa23.02■■□□□ 1.28
GSE1-206ENST00000438180 SBNO2Q9Y2G9 1366 aa23■■□□□ 1.27
GSE1-206ENST00000438180 KDM5AP29375 1690 aaKnown RBP22.98■■□□□ 1.27
GSE1-206ENST00000438180 A2ML1A8K2U0 1454 aa22.98■■□□□ 1.27
GSE1-206ENST00000438180 TNRQ92752 1358 aa22.95■■□□□ 1.26
GSE1-206ENST00000438180 CENPJQ9HC77 1338 aaPredicted RBP22.94■■□□□ 1.26
GSE1-206ENST00000438180 QRICH2Q9H0J4 1663 aa22.92■■□□□ 1.26
GSE1-206ENST00000438180 FER1L4A9Z1Z3 1794 aa22.92■■□□□ 1.26
GSE1-206ENST00000438180 RALBP1Q15311 655 aa22.91■■□□□ 1.26
GSE1-206ENST00000438180 NUTM2DQ5VT03 806 aaPredicted RBP22.91■■□□□ 1.26
GSE1-206ENST00000438180 RIMS2Q9UQ26 1411 aa22.91■■□□□ 1.26
GSE1-206ENST00000438180 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.91■■□□□ 1.26
GSE1-206ENST00000438180 HDGFP51858 240 aaKnown RBP22.9■■□□□ 1.26
GSE1-206ENST00000438180 ARHGEF28Q8N1W1 1705 aaKnown RBP22.9■■□□□ 1.26
GSE1-206ENST00000438180 MRS2Q9HD23 443 aa22.89■■□□□ 1.26
GSE1-206ENST00000438180 TRAK1Q9UPV9 953 aa22.89■■□□□ 1.26
GSE1-206ENST00000438180 NLRP1Q9C000 1473 aa22.89■■□□□ 1.25
GSE1-206ENST00000438180 TMEM132EQ6IEE7 984 aa22.88■■□□□ 1.25
GSE1-206ENST00000438180 PANK3Q9H999 370 aa22.87■■□□□ 1.25
GSE1-206ENST00000438180 ALKQ9UM73 1620 aa22.87■■□□□ 1.25
GSE1-206ENST00000438180 MYOM1P52179 1685 aa22.86■■□□□ 1.25
GSE1-206ENST00000438180 PER1O15534 1290 aaPredicted RBP22.85■■□□□ 1.25
GSE1-206ENST00000438180 C3P01024 1663 aa22.85■■□□□ 1.25
GSE1-206ENST00000438180 UBR1Q8IWV7 1749 aa22.85■■□□□ 1.25
GSE1-206ENST00000438180 ASXL1Q8IXJ9 1541 aa22.85■■□□□ 1.25
GSE1-206ENST00000438180 MYBBP1AQ9BQG0 1328 aaKnown RBP22.84■■□□□ 1.25
GSE1-206ENST00000438180 PARD3Q8TEW0 1356 aa22.82■■□□□ 1.24
GSE1-206ENST00000438180 PUS7Q96PZ0 661 aaKnown RBP22.81■■□□□ 1.24
GSE1-206ENST00000438180 YTHDC2Q9H6S0 1430 aaKnown RBP22.81■■□□□ 1.24
GSE1-206ENST00000438180 BRD4O60885 1362 aaPredicted RBP22.8■■□□□ 1.24
GSE1-206ENST00000438180 KNSTRNQ9Y448 316 aa22.8■■□□□ 1.24
GSE1-206ENST00000438180 EVC2Q86UK5 1308 aa22.78■■□□□ 1.24
GSE1-206ENST00000438180 CCDC184Q52MB2 194 aa22.78■■□□□ 1.24
GSE1-206ENST00000438180 SETD1AO15047 1707 aaKnown RBP22.78■■□□□ 1.24
GSE1-206ENST00000438180 TMEM2Q9UHN6 1383 aa22.78■■□□□ 1.24
GSE1-206ENST00000438180 CNGB1Q14028 1251 aaPredicted RBP22.77■■□□□ 1.24
GSE1-206ENST00000438180 DLC1Q96QB1 1528 aa22.77■■□□□ 1.23
GSE1-206ENST00000438180 TMC1Q8TDI8 760 aa22.77■■□□□ 1.23
GSE1-206ENST00000438180 NPC1L1Q9UHC9 1359 aa22.76■■□□□ 1.23
GSE1-206ENST00000438180 PTPRMP28827 1452 aa22.76■■□□□ 1.23
GSE1-206ENST00000438180 NLRP13Q86W25 1043 aa22.75■■□□□ 1.23
GSE1-206ENST00000438180 SCAF1Q9H7N4 1312 aaKnown RBP22.75■■□□□ 1.23
GSE1-206ENST00000438180 NRXN3Q9Y4C0 1643 aa22.74■■□□□ 1.23
GSE1-206ENST00000438180 HNRNPUQ00839 825 aaKnown RBP eCLIP22.73■■□□□ 1.23
GSE1-206ENST00000438180 FAM9BQ8IZU0 186 aa22.73■■□□□ 1.23
GSE1-206ENST00000438180 STK26Q9P289 416 aa22.73■■□□□ 1.23
GSE1-206ENST00000438180 LRPPRCP42704 1394 aaKnown RBP22.73■■□□□ 1.23
GSE1-206ENST00000438180 TULP4Q9NRJ4 1543 aa22.72■■□□□ 1.23
GSE1-206ENST00000438180 POGKQ9P215 609 aa22.71■■□□□ 1.23
GSE1-206ENST00000438180 GTF3C3Q9Y5Q9 886 aa22.71■■□□□ 1.23
GSE1-206ENST00000438180 CEBPAP49715 358 aaPredicted RBP22.71■■□□□ 1.23
GSE1-206ENST00000438180 CC2D1BQ5T0F9 858 aaKnown RBP22.71■■□□□ 1.23
GSE1-206ENST00000438180 NINLQ9Y2I6 1382 aa22.7■■□□□ 1.22
GSE1-206ENST00000438180 ABCC11Q96J66 1382 aa22.69■■□□□ 1.22
GSE1-206ENST00000438180 SLIT1O75093 1534 aa22.69■■□□□ 1.22
GSE1-206ENST00000438180 PRAM1Q96QH2 718 aa22.68■■□□□ 1.22
GSE1-206ENST00000438180 KNDC1Q76NI1 1749 aa22.68■■□□□ 1.22
GSE1-206ENST00000438180 RIMS1Q86UR5 1692 aaKnown RBP22.68■■□□□ 1.22
GSE1-206ENST00000438180 PLEKHG1Q9ULL1 1385 aa22.68■■□□□ 1.22
GSE1-206ENST00000438180 AMER1Q5JTC6 1135 aaPredicted RBP22.68■■□□□ 1.22
GSE1-206ENST00000438180 EID1Q9Y6B2 187 aa22.67■■□□□ 1.22
GSE1-206ENST00000438180 SENP3Q9H4L4 574 aaPredicted RBP22.66■■□□□ 1.22
GSE1-206ENST00000438180 ARHGAP23Q9P227 1491 aa22.66■■□□□ 1.22
GSE1-206ENST00000438180 PNISRQ8TF01 805 aaKnown RBP22.65■■□□□ 1.22
GSE1-206ENST00000438180 ATAD2Q6PL18 1390 aa22.65■■□□□ 1.22
GSE1-206ENST00000438180 ADAMTSL3P82987 1691 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms