RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.49■□□□□ 0.71
TMCO3-202ENST00000434316 SPINK5Q9NQ38 1064 aaPredicted RBP19.49■□□□□ 0.71
TMCO3-202ENST00000434316 ATP10AO60312 1499 aa19.49■□□□□ 0.71
TMCO3-202ENST00000434316 SLFN5Q08AF3 891 aa19.49■□□□□ 0.71
TMCO3-202ENST00000434316 DAXXQ9UER7 740 aaPredicted RBP19.48■□□□□ 0.71
TMCO3-202ENST00000434316 PLXNC1O60486 1568 aa19.48■□□□□ 0.71
TMCO3-202ENST00000434316 GSE1Q14687 1217 aa19.47■□□□□ 0.71
TMCO3-202ENST00000434316 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.47■□□□□ 0.71
TMCO3-202ENST00000434316 BRPF3Q9ULD4 1205 aa19.47■□□□□ 0.71
TMCO3-202ENST00000434316 DUOX2Q9NRD8 1548 aa19.45■□□□□ 0.7
TMCO3-202ENST00000434316 BCAR3O75815 825 aa19.45■□□□□ 0.7
TMCO3-202ENST00000434316 MADDQ8WXG6 1647 aa19.44■□□□□ 0.7
TMCO3-202ENST00000434316 APAF1O14727 1248 aa19.44■□□□□ 0.7
TMCO3-202ENST00000434316 IQGAP1P46940 1657 aa19.44■□□□□ 0.7
TMCO3-202ENST00000434316 FRAT1Q92837 279 aaPredicted RBP19.43■□□□□ 0.7
TMCO3-202ENST00000434316 ASXL1Q8IXJ9 1541 aa19.43■□□□□ 0.7
TMCO3-202ENST00000434316 TRMT2AQ8IZ69 625 aaKnown RBP19.43■□□□□ 0.7
TMCO3-202ENST00000434316 SYNMO15061 1565 aa19.42■□□□□ 0.7
TMCO3-202ENST00000434316 PIK3C2GO75747 1445 aa19.41■□□□□ 0.7
TMCO3-202ENST00000434316 DMRT2Q9Y5R5 561 aa19.41■□□□□ 0.7
TMCO3-202ENST00000434316 CLASP1Q7Z460 1538 aa19.41■□□□□ 0.7
TMCO3-202ENST00000434316 SCAF11Q99590 1463 aaKnown RBP19.4■□□□□ 0.7
TMCO3-202ENST00000434316 FRAT2O75474 233 aaPredicted RBP19.39■□□□□ 0.69
TMCO3-202ENST00000434316 CDCA8Q53HL2 280 aa19.39■□□□□ 0.69
TMCO3-202ENST00000434316 IGHDP01880 384 aa19.38■□□□□ 0.69
TMCO3-202ENST00000434316 NKTRP30414 1462 aaKnown RBP19.38■□□□□ 0.69
TMCO3-202ENST00000434316 MYOM1P52179 1685 aa19.38■□□□□ 0.69
TMCO3-202ENST00000434316 EIF3AQ14152 1382 aaKnown RBP19.37■□□□□ 0.69
TMCO3-202ENST00000434316 TRAPPC8Q9Y2L5 1435 aa19.35■□□□□ 0.69
TMCO3-202ENST00000434316 SPHKAPQ2M3C7 1700 aa19.34■□□□□ 0.69
TMCO3-202ENST00000434316 ABCC2Q92887 1545 aa19.34■□□□□ 0.69
TMCO3-202ENST00000434316 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.34■□□□□ 0.69
TMCO3-202ENST00000434316 E9PSI1 815 aa19.33■□□□□ 0.69
TMCO3-202ENST00000434316 NPC1L1Q9UHC9 1359 aa19.33■□□□□ 0.69
TMCO3-202ENST00000434316 SCAPERQ9BY12 1400 aa19.33■□□□□ 0.68
TMCO3-202ENST00000434316 USP19O94966 1318 aa19.32■□□□□ 0.68
TMCO3-202ENST00000434316 CLTCL1P53675 1640 aa19.32■□□□□ 0.68
TMCO3-202ENST00000434316 TRPM2O94759 1503 aa19.32■□□□□ 0.68
TMCO3-202ENST00000434316 SEC24BO95487 1268 aa19.31■□□□□ 0.68
TMCO3-202ENST00000434316 PANK1Q8TE04 598 aa19.31■□□□□ 0.68
TMCO3-202ENST00000434316 CARD14Q9BXL6 1004 aa19.31■□□□□ 0.68
TMCO3-202ENST00000434316 ERCC6L2Q5T890 1561 aa19.31■□□□□ 0.68
TMCO3-202ENST00000434316 EFCAB2Q5VUJ9 269 aa19.31■□□□□ 0.68
TMCO3-202ENST00000434316 COG6Q9Y2V7 657 aa19.31■□□□□ 0.68
TMCO3-202ENST00000434316 PLCH2O75038 1416 aa19.3■□□□□ 0.68
TMCO3-202ENST00000434316 CEP152O94986 1710 aa19.3■□□□□ 0.68
TMCO3-202ENST00000434316 CFAP70Q5T0N1 1121 aa19.29■□□□□ 0.68
TMCO3-202ENST00000434316 AFAP1Q8N556 730 aa19.29■□□□□ 0.68
TMCO3-202ENST00000434316 KDM5AP29375 1690 aaKnown RBP19.29■□□□□ 0.68
TMCO3-202ENST00000434316 PTPRTO14522 1441 aa19.28■□□□□ 0.68
TMCO3-202ENST00000434316 CENPJQ9HC77 1338 aaPredicted RBP19.28■□□□□ 0.68
TMCO3-202ENST00000434316 ABCC1P33527 1531 aa19.27■□□□□ 0.68
TMCO3-202ENST00000434316 CANXP27824 592 aaKnown RBP19.27■□□□□ 0.68
TMCO3-202ENST00000434316 SPAG9O60271 1321 aaKnown RBP19.27■□□□□ 0.68
TMCO3-202ENST00000434316 PRKCSHP14314 528 aaPredicted RBP19.27■□□□□ 0.68
TMCO3-202ENST00000434316 CLUAP1Q96AJ1 413 aa19.27■□□□□ 0.68
TMCO3-202ENST00000434316 ERVK-7P63135 1459 aa19.26■□□□□ 0.67
TMCO3-202ENST00000434316 CGNL1Q0VF96 1302 aa19.26■□□□□ 0.67
TMCO3-202ENST00000434316 PDE3AQ14432 1141 aa19.26■□□□□ 0.67
TMCO3-202ENST00000434316 WWC1Q8IX03 1113 aa19.26■□□□□ 0.67
TMCO3-202ENST00000434316 NEUROD2Q15784 382 aa19.25■□□□□ 0.67
TMCO3-202ENST00000434316 CHD1O14646 1710 aa19.25■□□□□ 0.67
TMCO3-202ENST00000434316 VIRMAQ69YN4 1812 aaKnown RBP19.25■□□□□ 0.67
TMCO3-202ENST00000434316 RRP7AQ9Y3A4 280 aaKnown RBP19.24■□□□□ 0.67
TMCO3-202ENST00000434316 ADGRF5Q8IZF2 1346 aa19.24■□□□□ 0.67
TMCO3-202ENST00000434316 STAC3Q96MF2 364 aa19.23■□□□□ 0.67
TMCO3-202ENST00000434316 TNNQ9UQP3 1299 aa19.23■□□□□ 0.67
TMCO3-202ENST00000434316 TNNT2P45379 298 aaPredicted RBP19.22■□□□□ 0.67
TMCO3-202ENST00000434316 SLKQ9H2G2 1235 aaPredicted RBP19.21■□□□□ 0.67
TMCO3-202ENST00000434316 UGGT1Q9NYU2 1555 aa19.21■□□□□ 0.67
TMCO3-202ENST00000434316 MAPK8IP3Q9UPT6 1336 aa19.21■□□□□ 0.67
TMCO3-202ENST00000434316 SHROOM2Q13796 1616 aa19.2■□□□□ 0.66
TMCO3-202ENST00000434316 POGKQ9P215 609 aa19.2■□□□□ 0.66
TMCO3-202ENST00000434316 ZFYVE16Q7Z3T8 1539 aa19.19■□□□□ 0.66
TMCO3-202ENST00000434316 RLBP1P12271 317 aa19.19■□□□□ 0.66
TMCO3-202ENST00000434316 BCL2L13Q9BXK5 485 aa19.19■□□□□ 0.66
TMCO3-202ENST00000434316 ABCA6Q8N139 1617 aa19.19■□□□□ 0.66
TMCO3-202ENST00000434316 NLRP1Q9C000 1473 aa19.19■□□□□ 0.66
TMCO3-202ENST00000434316 PCDHB15Q9Y5E8 787 aa19.19■□□□□ 0.66
TMCO3-202ENST00000434316 KIAA1210Q9ULL0 1709 aa19.18■□□□□ 0.66
TMCO3-202ENST00000434316 POLR3AO14802 1390 aaPredicted RBP19.18■□□□□ 0.66
TMCO3-202ENST00000434316 NGEFQ8N5V2 710 aa19.18■□□□□ 0.66
TMCO3-202ENST00000434316 ZCCHC11Q5TAX3 1644 aaKnown RBP19.18■□□□□ 0.66
TMCO3-202ENST00000434316 TET3O43151 1660 aa19.18■□□□□ 0.66
TMCO3-202ENST00000434316 RARSP54136 660 aaKnown RBP19.18■□□□□ 0.66
TMCO3-202ENST00000434316 KIF3BO15066 747 aa19.17■□□□□ 0.66
TMCO3-202ENST00000434316 NINLQ9Y2I6 1382 aa19.17■□□□□ 0.66
TMCO3-202ENST00000434316 DEPDC5O75140 1603 aa19.16■□□□□ 0.66
TMCO3-202ENST00000434316 MAP3K4Q9Y6R4 1608 aa19.16■□□□□ 0.66
TMCO3-202ENST00000434316 RTEL1-TNFRSF6BF6WH68 1400 aa19.15■□□□□ 0.66
TMCO3-202ENST00000434316 BECN1Q14457 450 aa19.15■□□□□ 0.66
TMCO3-202ENST00000434316 MORC1Q86VD1 984 aa19.15■□□□□ 0.66
TMCO3-202ENST00000434316 TCP11L2Q8N4U5 519 aa19.15■□□□□ 0.66
TMCO3-202ENST00000434316 KANK1Q14678 1352 aa19.15■□□□□ 0.66
TMCO3-202ENST00000434316 NSD3Q9BZ95 1437 aa19.14■□□□□ 0.66
TMCO3-202ENST00000434316 PDZRN3Q9UPQ7 1066 aa19.14■□□□□ 0.65
TMCO3-202ENST00000434316 SHPRHQ149N8 1683 aa19.14■□□□□ 0.65
TMCO3-202ENST00000434316 RUNDC1Q96C34 613 aa19.14■□□□□ 0.65
TMCO3-202ENST00000434316 SLC12A5Q9H2X9 1139 aa19.13■□□□□ 0.65
TMCO3-202ENST00000434316 PMFBP1Q8TBY8 1022 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms