RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 PLA2R1Q13018 1463 aa9.11□□□□□ -0.95
NIPAL3-205ENST00000432012 PITPNM1O00562 1244 aa9.11□□□□□ -0.95
NIPAL3-205ENST00000432012 HSP90B1P14625 803 aaKnown RBP9.11□□□□□ -0.95
NIPAL3-205ENST00000432012 ATP10BO94823 1461 aa9.1□□□□□ -0.95
NIPAL3-205ENST00000432012 CAMSAP1Q5T5Y3 1602 aa9.1□□□□□ -0.95
NIPAL3-205ENST00000432012 HECW1Q76N89 1606 aa9.1□□□□□ -0.95
NIPAL3-205ENST00000432012 C3P01024 1663 aa9.1□□□□□ -0.95
NIPAL3-205ENST00000432012 NCKAP5LQ9HCH0 1330 aa9.09□□□□□ -0.95
NIPAL3-205ENST00000432012 RAPGEF2Q9Y4G8 1499 aa9.09□□□□□ -0.95
NIPAL3-205ENST00000432012 TRAK2O60296 914 aa9.09□□□□□ -0.95
NIPAL3-205ENST00000432012 NPATQ14207 1427 aa9.09□□□□□ -0.95
NIPAL3-205ENST00000432012 CNTLNQ9NXG0 1405 aa9.09□□□□□ -0.95
NIPAL3-205ENST00000432012 CHADLQ6NUI6 762 aa9.09□□□□□ -0.95
NIPAL3-205ENST00000432012 GPIHBP1Q8IV16 184 aa9.09□□□□□ -0.95
NIPAL3-205ENST00000432012 REREQ9P2R6 1566 aa9.08□□□□□ -0.96
NIPAL3-205ENST00000432012 CEBPAP49715 358 aaPredicted RBP9.08□□□□□ -0.96
NIPAL3-205ENST00000432012 ZNF335Q9H4Z2 1342 aaPredicted RBP9.08□□□□□ -0.96
NIPAL3-205ENST00000432012 CTTNBP2Q8WZ74 1663 aa9.08□□□□□ -0.96
NIPAL3-205ENST00000432012 ESF1Q9H501 851 aaKnown RBP9.07□□□□□ -0.96
NIPAL3-205ENST00000432012 AGLP35573 1532 aa9.07□□□□□ -0.96
NIPAL3-205ENST00000432012 PIP4K2BP78356 416 aa9.06□□□□□ -0.96
NIPAL3-205ENST00000432012 CHRM1P11229 460 aaPredicted RBP9.05□□□□□ -0.96
NIPAL3-205ENST00000432012 POM121Q96HA1 1249 aa9.05□□□□□ -0.96
NIPAL3-205ENST00000432012 POLR3GLQ9BT43 218 aa9.05□□□□□ -0.96
NIPAL3-205ENST00000432012 GZF1Q9H116 711 aaPredicted RBP9.05□□□□□ -0.96
NIPAL3-205ENST00000432012 IRF5Q13568 498 aa9.04□□□□□ -0.96
NIPAL3-205ENST00000432012 RETREG2Q8NC44 543 aa9.04□□□□□ -0.96
NIPAL3-205ENST00000432012 ZNF142P52746 1687 aaPredicted RBP9.04□□□□□ -0.96
NIPAL3-205ENST00000432012 MFAP1P55081 439 aaKnown RBP9.04□□□□□ -0.96
NIPAL3-205ENST00000432012 TCOF1Q13428 1488 aaKnown RBP9.04□□□□□ -0.96
NIPAL3-205ENST00000432012 MROH2AA6NES4 1674 aa9.04□□□□□ -0.96
NIPAL3-205ENST00000432012 LARP6Q9BRS8 491 aaKnown RBP9.03□□□□□ -0.96
NIPAL3-205ENST00000432012 USP35Q9P2H5 1018 aa9.03□□□□□ -0.96
NIPAL3-205ENST00000432012 RGS17Q9UGC6 210 aaPredicted RBP9.02□□□□□ -0.97
NIPAL3-205ENST00000432012 SUPT6HQ7KZ85 1726 aaKnown RBP9.02□□□□□ -0.97
NIPAL3-205ENST00000432012 TMCO4Q5TGY1 634 aa9.01□□□□□ -0.97
NIPAL3-205ENST00000432012 TRAIPQ9BWF2 469 aa9□□□□□ -0.97
NIPAL3-205ENST00000432012 RAPGEF6Q8TEU7 1601 aa9□□□□□ -0.97
NIPAL3-205ENST00000432012 SCAPERQ9BY12 1400 aa9□□□□□ -0.97
NIPAL3-205ENST00000432012 FLIIQ13045 1269 aa9□□□□□ -0.97
NIPAL3-205ENST00000432012 PUS7Q96PZ0 661 aaKnown RBP9□□□□□ -0.97
NIPAL3-205ENST00000432012 TSPYL2Q9H2G4 693 aaPredicted RBP9□□□□□ -0.97
NIPAL3-205ENST00000432012 SHANK2Q9UPX8 1470 aa8.99□□□□□ -0.97
NIPAL3-205ENST00000432012 SMYD5Q6GMV2 418 aa8.99□□□□□ -0.97
NIPAL3-205ENST00000432012 PCDHB8Q9UN66 801 aa8.99□□□□□ -0.97
NIPAL3-205ENST00000432012 PCDHB13Q9Y5F0 798 aa8.99□□□□□ -0.97
NIPAL3-205ENST00000432012 PARP9Q8IXQ6 854 aa8.99□□□□□ -0.97
NIPAL3-205ENST00000432012 PLEKHD1A6NEE1 506 aa8.98□□□□□ -0.97
NIPAL3-205ENST00000432012 ZNF518AQ6AHZ1 1483 aa8.98□□□□□ -0.97
NIPAL3-205ENST00000432012 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.97□□□□□ -0.97
NIPAL3-205ENST00000432012 ACIN1Q9UKV3 1341 aaKnown RBP8.97□□□□□ -0.97
NIPAL3-205ENST00000432012 MCM6Q14566 821 aa8.97□□□□□ -0.97
NIPAL3-205ENST00000432012 CEP170BQ9Y4F5 1589 aaPredicted RBP8.97□□□□□ -0.97
NIPAL3-205ENST00000432012 MYO3AQ8NEV4 1616 aa8.96□□□□□ -0.97
NIPAL3-205ENST00000432012 RNF17Q9BXT8 1623 aaKnown RBP8.96□□□□□ -0.97
NIPAL3-205ENST00000432012 A6NJR5 290 aa8.96□□□□□ -0.97
NIPAL3-205ENST00000432012 UBE2Q2Q8WVN8 375 aa8.96□□□□□ -0.97
NIPAL3-205ENST00000432012 KDM5CP41229 1560 aa8.96□□□□□ -0.97
NIPAL3-205ENST00000432012 GPR37O15354 613 aa8.96□□□□□ -0.98
NIPAL3-205ENST00000432012 CCER1Q8TC90 406 aaPredicted RBP8.96□□□□□ -0.98
NIPAL3-205ENST00000432012 PLCH2O75038 1416 aa8.95□□□□□ -0.98
NIPAL3-205ENST00000432012 POTEAQ6S8J7 498 aa8.95□□□□□ -0.98
NIPAL3-205ENST00000432012 UPF1Q92900 1129 aaKnown RBP eCLIP8.95□□□□□ -0.98
NIPAL3-205ENST00000432012 DIP2CQ9Y2E4 1556 aa8.95□□□□□ -0.98
NIPAL3-205ENST00000432012 POLR1AO95602 1720 aaPredicted RBP8.95□□□□□ -0.98
NIPAL3-205ENST00000432012 SYNMO15061 1565 aa8.95□□□□□ -0.98
NIPAL3-205ENST00000432012 ALKQ9UM73 1620 aa8.94□□□□□ -0.98
NIPAL3-205ENST00000432012 NEUROD1Q13562 356 aa8.94□□□□□ -0.98
NIPAL3-205ENST00000432012 FBXO22Q8NEZ5 403 aa8.94□□□□□ -0.98
NIPAL3-205ENST00000432012 PHF8Q9UPP1 1060 aa8.94□□□□□ -0.98
NIPAL3-205ENST00000432012 EFCAB2Q5VUJ9 269 aa8.93□□□□□ -0.98
NIPAL3-205ENST00000432012 MLH3Q9UHC1 1453 aa8.93□□□□□ -0.98
NIPAL3-205ENST00000432012 SETD1AO15047 1707 aaKnown RBP8.93□□□□□ -0.98
NIPAL3-205ENST00000432012 BRD2P25440 801 aaKnown RBP8.92□□□□□ -0.98
NIPAL3-205ENST00000432012 CCDC102AQ96A19 550 aa8.92□□□□□ -0.98
NIPAL3-205ENST00000432012 FNBP4Q8N3X1 1017 aaPredicted RBP8.92□□□□□ -0.98
NIPAL3-205ENST00000432012 DDRGK1Q96HY6 314 aa8.91□□□□□ -0.98
NIPAL3-205ENST00000432012 A2ML1A8K2U0 1454 aa8.91□□□□□ -0.98
NIPAL3-205ENST00000432012 CARNS1A5YM72 827 aa8.91□□□□□ -0.98
NIPAL3-205ENST00000432012 FECHP22830 423 aa8.91□□□□□ -0.98
NIPAL3-205ENST00000432012 PROSER2Q86WR7 435 aaPredicted RBP8.91□□□□□ -0.98
NIPAL3-205ENST00000432012 FAM177A1Q8N128 213 aaPredicted RBP8.91□□□□□ -0.98
NIPAL3-205ENST00000432012 NUP153P49790 1475 aaKnown RBP8.91□□□□□ -0.98
NIPAL3-205ENST00000432012 MYO5CQ9NQX4 1742 aa8.91□□□□□ -0.98
NIPAL3-205ENST00000432012 VWDEQ8N2E2 1590 aa8.9□□□□□ -0.98
NIPAL3-205ENST00000432012 IRX6P78412 446 aaPredicted RBP8.9□□□□□ -0.98
NIPAL3-205ENST00000432012 DIEXFQ68CQ4 756 aaKnown RBP8.9□□□□□ -0.98
NIPAL3-205ENST00000432012 ZMYM3Q14202 1370 aa8.9□□□□□ -0.98
NIPAL3-205ENST00000432012 CENPBP07199 599 aaPredicted RBP8.9□□□□□ -0.98
NIPAL3-205ENST00000432012 EFCAB3Q8N7B9 438 aa8.9□□□□□ -0.98
NIPAL3-205ENST00000432012 FARP1Q9Y4F1 1045 aaPredicted RBP8.9□□□□□ -0.98
NIPAL3-205ENST00000432012 HMGB1P09429 215 aaKnown RBP8.89□□□□□ -0.99
NIPAL3-205ENST00000432012 SAMD9Q5K651 1589 aa8.89□□□□□ -0.99
NIPAL3-205ENST00000432012 ABCA6Q8N139 1617 aa8.89□□□□□ -0.99
NIPAL3-205ENST00000432012 FBXW7Q969H0 707 aa8.89□□□□□ -0.99
NIPAL3-205ENST00000432012 CDK12Q9NYV4 1490 aaPredicted RBP8.88□□□□□ -0.99
NIPAL3-205ENST00000432012 CCDC97Q96F63 343 aaPredicted RBP8.88□□□□□ -0.99
NIPAL3-205ENST00000432012 MYT1LQ9UL68 1186 aa8.88□□□□□ -0.99
NIPAL3-205ENST00000432012 DDX27Q96GQ7 796 aaKnown RBP8.88□□□□□ -0.99
NIPAL3-205ENST00000432012 NEURL4Q96JN8 1562 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms