RNA–Protein interactions for RNA: ENST00000430433.5

MRPL55-221, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-221ENST00000430433 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
MRPL55-221ENST00000430433 SENP3Q9H4L4 574 aaPredicted RBP16.99■□□□□ 0.31
MRPL55-221ENST00000430433 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.98■□□□□ 0.31
MRPL55-221ENST00000430433 SLC26A8Q96RN1 970 aa16.98■□□□□ 0.31
MRPL55-221ENST00000430433 STRCP1A6NGW2 1772 aa16.97■□□□□ 0.31
MRPL55-221ENST00000430433 PLEKHG1Q9ULL1 1385 aa16.96■□□□□ 0.31
MRPL55-221ENST00000430433 TRPM2O94759 1503 aa16.96■□□□□ 0.3
MRPL55-221ENST00000430433 NUTM2DQ5VT03 806 aaPredicted RBP16.95■□□□□ 0.3
MRPL55-221ENST00000430433 LRRC7Q96NW7 1537 aa16.95■□□□□ 0.3
MRPL55-221ENST00000430433 ZNF326Q5BKZ1 582 aaKnown RBP16.94■□□□□ 0.3
MRPL55-221ENST00000430433 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
MRPL55-221ENST00000430433 CLTCL1P53675 1640 aa16.93■□□□□ 0.3
MRPL55-221ENST00000430433 TOM1O60784 492 aa16.93■□□□□ 0.3
MRPL55-221ENST00000430433 SETD5Q9C0A6 1442 aa16.91■□□□□ 0.3
MRPL55-221ENST00000430433 KCNA6P17658 529 aa16.91■□□□□ 0.3
MRPL55-221ENST00000430433 PIP4K2BP78356 416 aa16.91■□□□□ 0.3
MRPL55-221ENST00000430433 FOXD1Q16676 465 aa16.89■□□□□ 0.29
MRPL55-221ENST00000430433 ACIN1Q9UKV3 1341 aaKnown RBP16.89■□□□□ 0.29
MRPL55-221ENST00000430433 PROSER2Q86WR7 435 aaPredicted RBP16.88■□□□□ 0.29
MRPL55-221ENST00000430433 MPHOSPH9Q99550 1183 aa16.88■□□□□ 0.29
MRPL55-221ENST00000430433 TBX22Q9Y458 520 aa16.88■□□□□ 0.29
MRPL55-221ENST00000430433 KIF1BO60333 1816 aa16.88■□□□□ 0.29
MRPL55-221ENST00000430433 NKTRP30414 1462 aaKnown RBP16.87■□□□□ 0.29
MRPL55-221ENST00000430433 DIP2AQ14689 1571 aa16.87■□□□□ 0.29
MRPL55-221ENST00000430433 NWD1Q149M9 1564 aa16.87■□□□□ 0.29
MRPL55-221ENST00000430433 TMEM94Q12767 1356 aa16.87■□□□□ 0.29
MRPL55-221ENST00000430433 ADAMTS13Q76LX8 1427 aa16.87■□□□□ 0.29
MRPL55-221ENST00000430433 RAB3GAP2Q9H2M9 1393 aa16.86■□□□□ 0.29
MRPL55-221ENST00000430433 CCDC144AA2RUR9 1427 aa16.83■□□□□ 0.28
MRPL55-221ENST00000430433 CHD2O14647 1828 aaKnown RBP16.83■□□□□ 0.28
MRPL55-221ENST00000430433 NEXMIFQ5QGS0 1516 aa16.83■□□□□ 0.28
MRPL55-221ENST00000430433 XIRP1Q702N8 1843 aaKnown RBP16.83■□□□□ 0.28
MRPL55-221ENST00000430433 RBM33Q96EV2 1170 aaKnown RBP16.83■□□□□ 0.28
MRPL55-221ENST00000430433 ALKQ9UM73 1620 aa16.82■□□□□ 0.28
MRPL55-221ENST00000430433 SETBP1Q9Y6X0 1596 aa16.82■□□□□ 0.28
MRPL55-221ENST00000430433 PIK3R4Q99570 1358 aa16.82■□□□□ 0.28
MRPL55-221ENST00000430433 NRXN3Q9Y4C0 1643 aa16.8■□□□□ 0.28
MRPL55-221ENST00000430433 RPGRIP1LQ68CZ1 1315 aa16.79■□□□□ 0.28
MRPL55-221ENST00000430433 VGFO15240 615 aaPredicted RBP16.79■□□□□ 0.28
MRPL55-221ENST00000430433 HSPA1LP34931 641 aa16.79■□□□□ 0.28
MRPL55-221ENST00000430433 C14orf37Q86TY3 774 aa16.79■□□□□ 0.28
MRPL55-221ENST00000430433 MSH6P52701 1360 aa16.78■□□□□ 0.28
MRPL55-221ENST00000430433 AMOTL2Q9Y2J4 779 aa16.77■□□□□ 0.28
MRPL55-221ENST00000430433 RGL3Q3MIN7 710 aa16.76■□□□□ 0.27
MRPL55-221ENST00000430433 PTPRUQ92729 1446 aa16.76■□□□□ 0.27
MRPL55-221ENST00000430433 METP08581 1390 aa16.75■□□□□ 0.27
MRPL55-221ENST00000430433 PPLO60437 1756 aa16.74■□□□□ 0.27
MRPL55-221ENST00000430433 SPATA31E1Q6ZUB1 1445 aa16.74■□□□□ 0.27
MRPL55-221ENST00000430433 NCOA3Q9Y6Q9 1424 aa16.73■□□□□ 0.27
MRPL55-221ENST00000430433 XRN1Q8IZH2 1706 aaKnown RBP16.73■□□□□ 0.27
MRPL55-221ENST00000430433 HRCP23327 699 aa16.72■□□□□ 0.27
MRPL55-221ENST00000430433 DISP3Q9P2K9 1392 aa16.72■□□□□ 0.27
MRPL55-221ENST00000430433 ANKRD30BQ9BXX2 1392 aa16.71■□□□□ 0.27
MRPL55-221ENST00000430433 FAM135BQ49AJ0 1406 aa16.7■□□□□ 0.26
MRPL55-221ENST00000430433 ATF3P18847 181 aa16.69■□□□□ 0.26
MRPL55-221ENST00000430433 C19orf44Q9H6X5 657 aa16.69■□□□□ 0.26
MRPL55-221ENST00000430433 SLAIN2Q9P270 581 aa16.69■□□□□ 0.26
MRPL55-221ENST00000430433 ROBO1Q9Y6N7 1651 aa16.68■□□□□ 0.26
MRPL55-221ENST00000430433 ADGRF5Q8IZF2 1346 aa16.68■□□□□ 0.26
MRPL55-221ENST00000430433 CADPS2Q86UW7 1296 aa16.67■□□□□ 0.26
MRPL55-221ENST00000430433 SETD1AO15047 1707 aaKnown RBP16.67■□□□□ 0.26
MRPL55-221ENST00000430433 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.67■□□□□ 0.26
MRPL55-221ENST00000430433 IFT172Q9UG01 1749 aa16.67■□□□□ 0.26
MRPL55-221ENST00000430433 DCCP43146 1447 aa16.63■□□□□ 0.25
MRPL55-221ENST00000430433 PTCH1Q13635 1447 aa16.63■□□□□ 0.25
MRPL55-221ENST00000430433 ADGRL3Q9HAR2 1447 aa16.63■□□□□ 0.25
MRPL55-221ENST00000430433 PIK3C2GO75747 1445 aa16.62■□□□□ 0.25
MRPL55-221ENST00000430433 ROBO2Q9HCK4 1378 aa16.62■□□□□ 0.25
MRPL55-221ENST00000430433 MED1Q15648 1581 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-221ENST00000430433 MYOM2P54296 1465 aa16.61■□□□□ 0.25
MRPL55-221ENST00000430433 STK26Q9P289 416 aa16.6■□□□□ 0.25
MRPL55-221ENST00000430433 PRAG1Q86YV5 1406 aa16.6■□□□□ 0.25
MRPL55-221ENST00000430433 NALCNQ8IZF0 1738 aa16.59■□□□□ 0.25
MRPL55-221ENST00000430433 PHLPP1O60346 1717 aa16.59■□□□□ 0.25
MRPL55-221ENST00000430433 TMEM132EQ6IEE7 984 aa16.58■□□□□ 0.24
MRPL55-221ENST00000430433 NRXN1Q9ULB1 1477 aa16.57■□□□□ 0.24
MRPL55-221ENST00000430433 MST1RQ04912 1400 aa16.57■□□□□ 0.24
MRPL55-221ENST00000430433 LRPPRCP42704 1394 aaKnown RBP16.57■□□□□ 0.24
MRPL55-221ENST00000430433 ASXL1Q8IXJ9 1541 aa16.56■□□□□ 0.24
MRPL55-221ENST00000430433 PHF23Q9BUL5 403 aaPredicted RBP16.56■□□□□ 0.24
MRPL55-221ENST00000430433 LAMC1P11047 1609 aa16.56■□□□□ 0.24
MRPL55-221ENST00000430433 CFAP70Q5T0N1 1121 aa16.55■□□□□ 0.24
MRPL55-221ENST00000430433 BRINP3Q76B58 766 aa16.55■□□□□ 0.24
MRPL55-221ENST00000430433 DCAF11Q8TEB1 546 aa16.55■□□□□ 0.24
MRPL55-221ENST00000430433 C14orf93Q9H972 538 aaKnown RBP16.55■□□□□ 0.24
MRPL55-221ENST00000430433 KDM2AQ9Y2K7 1162 aa16.55■□□□□ 0.24
MRPL55-221ENST00000430433 TECPR2O15040 1411 aa16.54■□□□□ 0.24
MRPL55-221ENST00000430433 YTHDC2Q9H6S0 1430 aaKnown RBP16.54■□□□□ 0.24
MRPL55-221ENST00000430433 ABCC11Q96J66 1382 aa16.54■□□□□ 0.24
MRPL55-221ENST00000430433 AHDC1Q5TGY3 1603 aaPredicted RBP16.53■□□□□ 0.24
MRPL55-221ENST00000430433 KNDC1Q76NI1 1749 aa16.53■□□□□ 0.24
MRPL55-221ENST00000430433 COL16A1Q07092 1604 aaPredicted RBP16.52■□□□□ 0.24
MRPL55-221ENST00000430433 DHX57Q6P158 1386 aaKnown RBP16.52■□□□□ 0.24
MRPL55-221ENST00000430433 ILDR2Q71H61 639 aa16.52■□□□□ 0.24
MRPL55-221ENST00000430433 JCADQ9P266 1359 aa16.51■□□□□ 0.23
MRPL55-221ENST00000430433 WAPLQ7Z5K2 1190 aa16.51■□□□□ 0.23
MRPL55-221ENST00000430433 STAC3Q96MF2 364 aa16.51■□□□□ 0.23
MRPL55-221ENST00000430433 C1orf167Q5SNV9 1468 aa16.5■□□□□ 0.23
MRPL55-221ENST00000430433 CDC42BPGQ6DT37 1551 aa16.5■□□□□ 0.23
MRPL55-221ENST00000430433 PLEKHH1Q9ULM0 1364 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms