RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 PTPRMP28827 1452 aa19.86■□□□□ 0.77
CALD1-207ENST00000430085 PLPPR3Q6T4P5 718 aa19.85■□□□□ 0.77
CALD1-207ENST00000430085 MYOM2P54296 1465 aa19.85■□□□□ 0.77
CALD1-207ENST00000430085 ZMYM3Q14202 1370 aa19.83■□□□□ 0.77
CALD1-207ENST00000430085 POLR3GLQ9BT43 218 aa19.83■□□□□ 0.77
CALD1-207ENST00000430085 IFT172Q9UG01 1749 aa19.83■□□□□ 0.76
CALD1-207ENST00000430085 CEBPAP49715 358 aaPredicted RBP19.82■□□□□ 0.76
CALD1-207ENST00000430085 SYNMO15061 1565 aa19.82■□□□□ 0.76
CALD1-207ENST00000430085 CCER2I3L3R5 266 aa19.82■□□□□ 0.76
CALD1-207ENST00000430085 PIK3C2BO00750 1634 aa19.82■□□□□ 0.76
CALD1-207ENST00000430085 KIAA1210Q9ULL0 1709 aa19.8■□□□□ 0.76
CALD1-207ENST00000430085 PREX1Q8TCU6 1659 aa19.79■□□□□ 0.76
CALD1-207ENST00000430085 SLC52A1Q9NWF4 448 aa19.78■□□□□ 0.76
CALD1-207ENST00000430085 RPGRIP1LQ68CZ1 1315 aa19.78■□□□□ 0.76
CALD1-207ENST00000430085 ADGRF5Q8IZF2 1346 aa19.77■□□□□ 0.76
CALD1-207ENST00000430085 PPLO60437 1756 aa19.76■□□□□ 0.75
CALD1-207ENST00000430085 IQGAP1P46940 1657 aa19.76■□□□□ 0.75
CALD1-207ENST00000430085 NRXN1Q9ULB1 1477 aa19.76■□□□□ 0.75
CALD1-207ENST00000430085 SCAF11Q99590 1463 aaKnown RBP19.75■□□□□ 0.75
CALD1-207ENST00000430085 FBXO31Q5XUX0 539 aaPredicted RBP19.74■□□□□ 0.75
CALD1-207ENST00000430085 IDI1Q13907 227 aa19.74■□□□□ 0.75
CALD1-207ENST00000430085 ERVK-7P63135 1459 aa19.73■□□□□ 0.75
CALD1-207ENST00000430085 CFAP70Q5T0N1 1121 aa19.72■□□□□ 0.75
CALD1-207ENST00000430085 EIF3AQ14152 1382 aaKnown RBP19.72■□□□□ 0.75
CALD1-207ENST00000430085 TESK2Q96S53 571 aa19.72■□□□□ 0.75
CALD1-207ENST00000430085 SPATA31D1Q6ZQQ2 1576 aa19.71■□□□□ 0.75
CALD1-207ENST00000430085 TMF1P82094 1093 aa19.7■□□□□ 0.74
CALD1-207ENST00000430085 PIK3C2GO75747 1445 aa19.69■□□□□ 0.74
CALD1-207ENST00000430085 VGFO15240 615 aaPredicted RBP19.68■□□□□ 0.74
CALD1-207ENST00000430085 PRKRIP1Q9H875 184 aaPredicted RBP19.68■□□□□ 0.74
CALD1-207ENST00000430085 NEXMIFQ5QGS0 1516 aa19.68■□□□□ 0.74
CALD1-207ENST00000430085 DISP3Q9P2K9 1392 aa19.67■□□□□ 0.74
CALD1-207ENST00000430085 TMEM131LA2VDJ0 1609 aa19.67■□□□□ 0.74
CALD1-207ENST00000430085 SETBP1Q9Y6X0 1596 aa19.67■□□□□ 0.74
CALD1-207ENST00000430085 MYO3AQ8NEV4 1616 aa19.66■□□□□ 0.74
CALD1-207ENST00000430085 SETD1BQ9UPS6 1966 aaKnown RBP19.66■□□□□ 0.74
CALD1-207ENST00000430085 TNRQ92752 1358 aa19.66■□□□□ 0.74
CALD1-207ENST00000430085 C14orf93Q9H972 538 aaKnown RBP19.64■□□□□ 0.74
CALD1-207ENST00000430085 STAG3Q9UJ98 1225 aa19.64■□□□□ 0.74
CALD1-207ENST00000430085 MYO5BQ9ULV0 1848 aa19.64■□□□□ 0.74
CALD1-207ENST00000430085 AEBP2Q6ZN18 517 aaPredicted RBP19.64■□□□□ 0.73
CALD1-207ENST00000430085 CDCA8Q53HL2 280 aa19.63■□□□□ 0.73
CALD1-207ENST00000430085 NUTM2DQ5VT03 806 aaPredicted RBP19.63■□□□□ 0.73
CALD1-207ENST00000430085 ZFYVE9O95405 1425 aa19.62■□□□□ 0.73
CALD1-207ENST00000430085 SLC24A1O60721 1099 aa19.61■□□□□ 0.73
CALD1-207ENST00000430085 ZNF142P52746 1687 aaPredicted RBP19.6■□□□□ 0.73
CALD1-207ENST00000430085 ADGRB1O14514 1584 aa19.59■□□□□ 0.73
CALD1-207ENST00000430085 CEP170BQ9Y4F5 1589 aaPredicted RBP19.59■□□□□ 0.73
CALD1-207ENST00000430085 NLRP1Q9C000 1473 aa19.58■□□□□ 0.73
CALD1-207ENST00000430085 CNGB1Q14028 1251 aaPredicted RBP19.57■□□□□ 0.72
CALD1-207ENST00000430085 LMTK3Q96Q04 1460 aa19.57■□□□□ 0.72
CALD1-207ENST00000430085 A2ML1A8K2U0 1454 aa19.56■□□□□ 0.72
CALD1-207ENST00000430085 TMEM132EQ6IEE7 984 aa19.55■□□□□ 0.72
CALD1-207ENST00000430085 TRAK1Q9UPV9 953 aa19.55■□□□□ 0.72
CALD1-207ENST00000430085 UBR1Q8IWV7 1749 aa19.55■□□□□ 0.72
CALD1-207ENST00000430085 MRS2Q9HD23 443 aa19.55■□□□□ 0.72
CALD1-207ENST00000430085 CENPJQ9HC77 1338 aaPredicted RBP19.54■□□□□ 0.72
CALD1-207ENST00000430085 KTN1Q86UP2 1357 aaKnown RBP19.54■□□□□ 0.72
CALD1-207ENST00000430085 KDM5AP29375 1690 aaKnown RBP19.53■□□□□ 0.72
CALD1-207ENST00000430085 SBNO2Q9Y2G9 1366 aa19.53■□□□□ 0.72
CALD1-207ENST00000430085 PANK3Q9H999 370 aa19.53■□□□□ 0.72
CALD1-207ENST00000430085 CCDC184Q52MB2 194 aa19.51■□□□□ 0.71
CALD1-207ENST00000430085 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
CALD1-207ENST00000430085 RALBP1Q15311 655 aa19.51■□□□□ 0.71
CALD1-207ENST00000430085 QRICH2Q9H0J4 1663 aa19.5■□□□□ 0.71
CALD1-207ENST00000430085 RIMS2Q9UQ26 1411 aa19.5■□□□□ 0.71
CALD1-207ENST00000430085 PER1O15534 1290 aaPredicted RBP19.49■□□□□ 0.71
CALD1-207ENST00000430085 HSPA2P54652 639 aa19.49■□□□□ 0.71
CALD1-207ENST00000430085 SENP3Q9H4L4 574 aaPredicted RBP19.49■□□□□ 0.71
CALD1-207ENST00000430085 ARHGEF28Q8N1W1 1705 aaKnown RBP19.47■□□□□ 0.71
CALD1-207ENST00000430085 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.46■□□□□ 0.71
CALD1-207ENST00000430085 GTF3C3Q9Y5Q9 886 aa19.46■□□□□ 0.71
CALD1-207ENST00000430085 MYBBP1AQ9BQG0 1328 aaKnown RBP19.46■□□□□ 0.71
CALD1-207ENST00000430085 ALKQ9UM73 1620 aa19.46■□□□□ 0.71
CALD1-207ENST00000430085 MYOM1P52179 1685 aa19.46■□□□□ 0.71
CALD1-207ENST00000430085 ASXL1Q8IXJ9 1541 aa19.45■□□□□ 0.7
CALD1-207ENST00000430085 HDGFP51858 240 aaKnown RBP19.45■□□□□ 0.7
CALD1-207ENST00000430085 FAM9BQ8IZU0 186 aa19.45■□□□□ 0.7
CALD1-207ENST00000430085 THEMISQ8N1K5 641 aaPredicted RBP19.44■□□□□ 0.7
CALD1-207ENST00000430085 STK26Q9P289 416 aa19.43■□□□□ 0.7
CALD1-207ENST00000430085 KNSTRNQ9Y448 316 aa19.43■□□□□ 0.7
CALD1-207ENST00000430085 PARD3Q8TEW0 1356 aa19.43■□□□□ 0.7
CALD1-207ENST00000430085 HNRNPUQ00839 825 aaKnown RBP eCLIP19.43■□□□□ 0.7
CALD1-207ENST00000430085 YTHDC2Q9H6S0 1430 aaKnown RBP19.42■□□□□ 0.7
CALD1-207ENST00000430085 CC2D1BQ5T0F9 858 aaKnown RBP19.42■□□□□ 0.7
CALD1-207ENST00000430085 TMC1Q8TDI8 760 aa19.42■□□□□ 0.7
CALD1-207ENST00000430085 STRCQ7RTU9 1775 aa19.41■□□□□ 0.7
CALD1-207ENST00000430085 SLIT1O75093 1534 aa19.4■□□□□ 0.7
CALD1-207ENST00000430085 BRD4O60885 1362 aaPredicted RBP19.4■□□□□ 0.7
CALD1-207ENST00000430085 TMEM2Q9UHN6 1383 aa19.4■□□□□ 0.7
CALD1-207ENST00000430085 ARHGAP23Q9P227 1491 aa19.4■□□□□ 0.7
CALD1-207ENST00000430085 EVC2Q86UK5 1308 aa19.39■□□□□ 0.7
CALD1-207ENST00000430085 NLRP13Q86W25 1043 aa19.38■□□□□ 0.69
CALD1-207ENST00000430085 POGKQ9P215 609 aa19.37■□□□□ 0.69
CALD1-207ENST00000430085 NCKAP5LQ9HCH0 1330 aa19.36■□□□□ 0.69
CALD1-207ENST00000430085 SAFB2Q14151 953 aaKnown RBP eCLIP19.36■□□□□ 0.69
CALD1-207ENST00000430085 LTKP29376 864 aa19.35■□□□□ 0.69
CALD1-207ENST00000430085 PUS7Q96PZ0 661 aaKnown RBP19.35■□□□□ 0.69
CALD1-207ENST00000430085 PRAM1Q96QH2 718 aa19.35■□□□□ 0.69
CALD1-207ENST00000430085 SETD1AO15047 1707 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms