RNA–Protein interactions for RNA: ENST00000429051.1

RCC1-208, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 3

Gene RCC1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-208ENST00000429051 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.26■□□□□ 0.35
RCC1-208ENST00000429051 BCANQ96GW7 911 aa17.25■□□□□ 0.35
RCC1-208ENST00000429051 TRPM2O94759 1503 aa17.25■□□□□ 0.35
RCC1-208ENST00000429051 PLEKHG1Q9ULL1 1385 aa17.24■□□□□ 0.35
RCC1-208ENST00000429051 ACIN1Q9UKV3 1341 aaKnown RBP17.23■□□□□ 0.35
RCC1-208ENST00000429051 SLC4A1APQ9BWU0 796 aaKnown RBP17.23■□□□□ 0.35
RCC1-208ENST00000429051 LRRC7Q96NW7 1537 aa17.22■□□□□ 0.35
RCC1-208ENST00000429051 TOM1O60784 492 aa17.22■□□□□ 0.35
RCC1-208ENST00000429051 KIF1BO60333 1816 aa17.21■□□□□ 0.35
RCC1-208ENST00000429051 SLC26A8Q96RN1 970 aa17.21■□□□□ 0.35
RCC1-208ENST00000429051 CLTCL1P53675 1640 aa17.21■□□□□ 0.35
RCC1-208ENST00000429051 DIP2AQ14689 1571 aa17.19■□□□□ 0.34
RCC1-208ENST00000429051 KCNA6P17658 529 aa17.18■□□□□ 0.34
RCC1-208ENST00000429051 ZNF326Q5BKZ1 582 aaKnown RBP17.18■□□□□ 0.34
RCC1-208ENST00000429051 NWD1Q149M9 1564 aa17.18■□□□□ 0.34
RCC1-208ENST00000429051 NKTRP30414 1462 aaKnown RBP17.17■□□□□ 0.34
RCC1-208ENST00000429051 SETD5Q9C0A6 1442 aa17.16■□□□□ 0.34
RCC1-208ENST00000429051 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
RCC1-208ENST00000429051 CHD2O14647 1828 aaKnown RBP17.15■□□□□ 0.34
RCC1-208ENST00000429051 XIRP1Q702N8 1843 aaKnown RBP17.15■□□□□ 0.34
RCC1-208ENST00000429051 TBX22Q9Y458 520 aa17.15■□□□□ 0.34
RCC1-208ENST00000429051 NUTM2DQ5VT03 806 aaPredicted RBP17.14■□□□□ 0.33
RCC1-208ENST00000429051 PIP4K2BP78356 416 aa17.13■□□□□ 0.33
RCC1-208ENST00000429051 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
RCC1-208ENST00000429051 PIK3R4Q99570 1358 aa17.13■□□□□ 0.33
RCC1-208ENST00000429051 PROSER2Q86WR7 435 aaPredicted RBP17.12■□□□□ 0.33
RCC1-208ENST00000429051 MPHOSPH9Q99550 1183 aa17.12■□□□□ 0.33
RCC1-208ENST00000429051 ADAMTS13Q76LX8 1427 aa17.12■□□□□ 0.33
RCC1-208ENST00000429051 NEXMIFQ5QGS0 1516 aa17.11■□□□□ 0.33
RCC1-208ENST00000429051 SETBP1Q9Y6X0 1596 aa17.11■□□□□ 0.33
RCC1-208ENST00000429051 TMEM94Q12767 1356 aa17.11■□□□□ 0.33
RCC1-208ENST00000429051 CCDC144AA2RUR9 1427 aa17.1■□□□□ 0.33
RCC1-208ENST00000429051 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
RCC1-208ENST00000429051 RAB3GAP2Q9H2M9 1393 aa17.09■□□□□ 0.33
RCC1-208ENST00000429051 NRXN3Q9Y4C0 1643 aa17.08■□□□□ 0.32
RCC1-208ENST00000429051 RPGRIP1LQ68CZ1 1315 aa17.07■□□□□ 0.32
RCC1-208ENST00000429051 SOCS7O14512 581 aa17.07■□□□□ 0.32
RCC1-208ENST00000429051 FOXD1Q16676 465 aa17.07■□□□□ 0.32
RCC1-208ENST00000429051 MSH6P52701 1360 aa17.06■□□□□ 0.32
RCC1-208ENST00000429051 VGFO15240 615 aaPredicted RBP17.06■□□□□ 0.32
RCC1-208ENST00000429051 NCOA3Q9Y6Q9 1424 aa17.05■□□□□ 0.32
RCC1-208ENST00000429051 PPLO60437 1756 aa17.05■□□□□ 0.32
RCC1-208ENST00000429051 HSPA1LP34931 641 aa17.03■□□□□ 0.32
RCC1-208ENST00000429051 XRN1Q8IZH2 1706 aaKnown RBP17.02■□□□□ 0.32
RCC1-208ENST00000429051 RBM33Q96EV2 1170 aaKnown RBP17.02■□□□□ 0.32
RCC1-208ENST00000429051 AMOTL2Q9Y2J4 779 aa17.02■□□□□ 0.32
RCC1-208ENST00000429051 HRCP23327 699 aa17.01■□□□□ 0.31
RCC1-208ENST00000429051 C14orf37Q86TY3 774 aa17.01■□□□□ 0.31
RCC1-208ENST00000429051 PTPRUQ92729 1446 aa17■□□□□ 0.31
RCC1-208ENST00000429051 IFT172Q9UG01 1749 aa16.99■□□□□ 0.31
RCC1-208ENST00000429051 FAM135BQ49AJ0 1406 aa16.99■□□□□ 0.31
RCC1-208ENST00000429051 SPATA31E1Q6ZUB1 1445 aa16.99■□□□□ 0.31
RCC1-208ENST00000429051 METP08581 1390 aa16.98■□□□□ 0.31
RCC1-208ENST00000429051 ANKRD30BQ9BXX2 1392 aa16.98■□□□□ 0.31
RCC1-208ENST00000429051 SETD1AO15047 1707 aaKnown RBP16.98■□□□□ 0.31
RCC1-208ENST00000429051 ROBO1Q9Y6N7 1651 aa16.97■□□□□ 0.31
RCC1-208ENST00000429051 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.97■□□□□ 0.31
RCC1-208ENST00000429051 RGL3Q3MIN7 710 aa16.97■□□□□ 0.31
RCC1-208ENST00000429051 DISP3Q9P2K9 1392 aa16.97■□□□□ 0.31
RCC1-208ENST00000429051 C19orf44Q9H6X5 657 aa16.96■□□□□ 0.31
RCC1-208ENST00000429051 ATF3P18847 181 aa16.95■□□□□ 0.3
RCC1-208ENST00000429051 CADPS2Q86UW7 1296 aa16.95■□□□□ 0.3
RCC1-208ENST00000429051 SLAIN2Q9P270 581 aa16.95■□□□□ 0.3
RCC1-208ENST00000429051 DCCP43146 1447 aa16.94■□□□□ 0.3
RCC1-208ENST00000429051 PTCH1Q13635 1447 aa16.92■□□□□ 0.3
RCC1-208ENST00000429051 ADGRF5Q8IZF2 1346 aa16.91■□□□□ 0.3
RCC1-208ENST00000429051 PRAG1Q86YV5 1406 aa16.9■□□□□ 0.3
RCC1-208ENST00000429051 MED1Q15648 1581 aaPredicted RBP16.89■□□□□ 0.3
RCC1-208ENST00000429051 PIK3C2GO75747 1445 aa16.89■□□□□ 0.29
RCC1-208ENST00000429051 ADGRL3Q9HAR2 1447 aa16.89■□□□□ 0.29
RCC1-208ENST00000429051 MYOM2P54296 1465 aa16.89■□□□□ 0.29
RCC1-208ENST00000429051 ILDR2Q71H61 639 aa16.89■□□□□ 0.29
RCC1-208ENST00000429051 PHLPP1O60346 1717 aa16.89■□□□□ 0.29
RCC1-208ENST00000429051 NALCNQ8IZF0 1738 aa16.89■□□□□ 0.29
RCC1-208ENST00000429051 LAMC1P11047 1609 aa16.88■□□□□ 0.29
RCC1-208ENST00000429051 KNDC1Q76NI1 1749 aa16.85■□□□□ 0.29
RCC1-208ENST00000429051 ROBO2Q9HCK4 1378 aa16.85■□□□□ 0.29
RCC1-208ENST00000429051 NRXN1Q9ULB1 1477 aa16.85■□□□□ 0.29
RCC1-208ENST00000429051 TECPR2O15040 1411 aa16.83■□□□□ 0.28
RCC1-208ENST00000429051 MST1RQ04912 1400 aa16.83■□□□□ 0.28
RCC1-208ENST00000429051 AHDC1Q5TGY3 1603 aaPredicted RBP16.83■□□□□ 0.28
RCC1-208ENST00000429051 LRPPRCP42704 1394 aaKnown RBP16.82■□□□□ 0.28
RCC1-208ENST00000429051 STAC3Q96MF2 364 aa16.82■□□□□ 0.28
RCC1-208ENST00000429051 COL16A1Q07092 1604 aaPredicted RBP16.81■□□□□ 0.28
RCC1-208ENST00000429051 ASXL1Q8IXJ9 1541 aa16.81■□□□□ 0.28
RCC1-208ENST00000429051 PHF23Q9BUL5 403 aaPredicted RBP16.81■□□□□ 0.28
RCC1-208ENST00000429051 YTHDC2Q9H6S0 1430 aaKnown RBP16.8■□□□□ 0.28
RCC1-208ENST00000429051 ABCC11Q96J66 1382 aa16.8■□□□□ 0.28
RCC1-208ENST00000429051 BRINP3Q76B58 766 aa16.8■□□□□ 0.28
RCC1-208ENST00000429051 C14orf93Q9H972 538 aaKnown RBP16.8■□□□□ 0.28
RCC1-208ENST00000429051 STK26Q9P289 416 aa16.8■□□□□ 0.28
RCC1-208ENST00000429051 DHX57Q6P158 1386 aaKnown RBP16.79■□□□□ 0.28
RCC1-208ENST00000429051 JCADQ9P266 1359 aa16.79■□□□□ 0.28
RCC1-208ENST00000429051 TMEM132EQ6IEE7 984 aa16.79■□□□□ 0.28
RCC1-208ENST00000429051 CDC42BPGQ6DT37 1551 aa16.79■□□□□ 0.28
RCC1-208ENST00000429051 DCAF11Q8TEB1 546 aa16.78■□□□□ 0.28
RCC1-208ENST00000429051 NHSL1Q5SYE7 1610 aa16.78■□□□□ 0.28
RCC1-208ENST00000429051 CFAP70Q5T0N1 1121 aa16.77■□□□□ 0.28
RCC1-208ENST00000429051 C1orf167Q5SNV9 1468 aa16.77■□□□□ 0.28
RCC1-208ENST00000429051 KDM2AQ9Y2K7 1162 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms