RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 CAMSAP1Q5T5Y3 1602 aa23.52■■□□□ 1.36
PRDM5-203ENST00000428209 ADGRB3O60242 1522 aa23.51■■□□□ 1.35
PRDM5-203ENST00000428209 PER1O15534 1290 aaPredicted RBP23.51■■□□□ 1.35
PRDM5-203ENST00000428209 TMC1Q8TDI8 760 aa23.51■■□□□ 1.35
PRDM5-203ENST00000428209 IFT172Q9UG01 1749 aa23.51■■□□□ 1.35
PRDM5-203ENST00000428209 TSPOAP1O95153 1857 aa23.5■■□□□ 1.35
PRDM5-203ENST00000428209 EIF3AQ14152 1382 aaKnown RBP23.49■■□□□ 1.35
PRDM5-203ENST00000428209 MYBBP1AQ9BQG0 1328 aaKnown RBP23.49■■□□□ 1.35
PRDM5-203ENST00000428209 FKBP8Q14318 412 aa23.49■■□□□ 1.35
PRDM5-203ENST00000428209 PANK3Q9H999 370 aa23.49■■□□□ 1.35
PRDM5-203ENST00000428209 NEFLP07196 543 aa23.48■■□□□ 1.35
PRDM5-203ENST00000428209 KIF13AQ9H1H9 1805 aa23.48■■□□□ 1.35
PRDM5-203ENST00000428209 NOS1P29475 1434 aa23.48■■□□□ 1.35
PRDM5-203ENST00000428209 ZBED9Q6R2W3 1325 aa23.47■■□□□ 1.35
PRDM5-203ENST00000428209 CDCA8Q53HL2 280 aa23.46■■□□□ 1.35
PRDM5-203ENST00000428209 ZMYM4Q5VZL5 1548 aa23.46■■□□□ 1.35
PRDM5-203ENST00000428209 NRXN1Q9ULB1 1477 aa23.46■■□□□ 1.35
PRDM5-203ENST00000428209 PNISRQ8TF01 805 aaKnown RBP23.45■■□□□ 1.34
PRDM5-203ENST00000428209 SIGLEC1Q9BZZ2 1709 aa23.44■■□□□ 1.34
PRDM5-203ENST00000428209 BRD4O60885 1362 aaPredicted RBP23.44■■□□□ 1.34
PRDM5-203ENST00000428209 ARHGAP31Q2M1Z3 1444 aa23.44■■□□□ 1.34
PRDM5-203ENST00000428209 ZC3H13Q5T200 1668 aaKnown RBP23.44■■□□□ 1.34
PRDM5-203ENST00000428209 PARD3Q8TEW0 1356 aa23.43■■□□□ 1.34
PRDM5-203ENST00000428209 RPGRIP1LQ68CZ1 1315 aa23.43■■□□□ 1.34
PRDM5-203ENST00000428209 PPLO60437 1756 aa23.41■■□□□ 1.34
PRDM5-203ENST00000428209 SYNMO15061 1565 aa23.4■■□□□ 1.34
PRDM5-203ENST00000428209 CC2D1BQ5T0F9 858 aaKnown RBP23.4■■□□□ 1.34
PRDM5-203ENST00000428209 SLC24A1O60721 1099 aa23.39■■□□□ 1.34
PRDM5-203ENST00000428209 NLRP13Q86W25 1043 aa23.39■■□□□ 1.33
PRDM5-203ENST00000428209 PIK3C2BO00750 1634 aa23.39■■□□□ 1.33
PRDM5-203ENST00000428209 TRHP20396 242 aaPredicted RBP23.38■■□□□ 1.33
PRDM5-203ENST00000428209 PIK3C2GO75747 1445 aa23.38■■□□□ 1.33
PRDM5-203ENST00000428209 BCANQ96GW7 911 aa23.37■■□□□ 1.33
PRDM5-203ENST00000428209 C14orf93Q9H972 538 aaKnown RBP23.37■■□□□ 1.33
PRDM5-203ENST00000428209 IDI1Q13907 227 aa23.36■■□□□ 1.33
PRDM5-203ENST00000428209 SLC52A1Q9NWF4 448 aa23.36■■□□□ 1.33
PRDM5-203ENST00000428209 SETBP1Q9Y6X0 1596 aa23.35■■□□□ 1.33
PRDM5-203ENST00000428209 KNSTRNQ9Y448 316 aa23.34■■□□□ 1.33
PRDM5-203ENST00000428209 VGFO15240 615 aaPredicted RBP23.33■■□□□ 1.33
PRDM5-203ENST00000428209 LRPPRCP42704 1394 aaKnown RBP23.33■■□□□ 1.33
PRDM5-203ENST00000428209 NUTM2DQ5VT03 806 aaPredicted RBP23.32■■□□□ 1.32
PRDM5-203ENST00000428209 TRAK1Q9UPV9 953 aa23.31■■□□□ 1.32
PRDM5-203ENST00000428209 KDM5AP29375 1690 aaKnown RBP23.31■■□□□ 1.32
PRDM5-203ENST00000428209 PELP1Q8IZL8 1130 aaKnown RBP23.3■■□□□ 1.32
PRDM5-203ENST00000428209 ERVK-7P63135 1459 aa23.3■■□□□ 1.32
PRDM5-203ENST00000428209 CENPJQ9HC77 1338 aaPredicted RBP23.3■■□□□ 1.32
PRDM5-203ENST00000428209 REREQ9P2R6 1566 aa23.3■■□□□ 1.32
PRDM5-203ENST00000428209 PREX1Q8TCU6 1659 aa23.3■■□□□ 1.32
PRDM5-203ENST00000428209 TMEM132EQ6IEE7 984 aa23.3■■□□□ 1.32
PRDM5-203ENST00000428209 NEXMIFQ5QGS0 1516 aa23.29■■□□□ 1.32
PRDM5-203ENST00000428209 MYO3AQ8NEV4 1616 aa23.28■■□□□ 1.32
PRDM5-203ENST00000428209 AGLP35573 1532 aa23.28■■□□□ 1.32
PRDM5-203ENST00000428209 SBNO2Q9Y2G9 1366 aa23.27■■□□□ 1.32
PRDM5-203ENST00000428209 FBXO31Q5XUX0 539 aaPredicted RBP23.27■■□□□ 1.32
PRDM5-203ENST00000428209 PPP6R1Q9UPN7 881 aa23.27■■□□□ 1.32
PRDM5-203ENST00000428209 ADGRB1O14514 1584 aa23.27■■□□□ 1.32
PRDM5-203ENST00000428209 MYOM1P52179 1685 aa23.27■■□□□ 1.32
PRDM5-203ENST00000428209 AMER1Q5JTC6 1135 aaPredicted RBP23.26■■□□□ 1.31
PRDM5-203ENST00000428209 SENP3-EIF4A1A0A087X0R7 540 aa23.25■■□□□ 1.31
PRDM5-203ENST00000428209 MLECQ14165 292 aa23.22■■□□□ 1.31
PRDM5-203ENST00000428209 ASXL1Q8IXJ9 1541 aa23.22■■□□□ 1.31
PRDM5-203ENST00000428209 TMEM131LA2VDJ0 1609 aa23.21■■□□□ 1.31
PRDM5-203ENST00000428209 MYO5BQ9ULV0 1848 aa23.21■■□□□ 1.31
PRDM5-203ENST00000428209 ZFYVE9O95405 1425 aa23.21■■□□□ 1.31
PRDM5-203ENST00000428209 SMG6Q86US8 1419 aaKnown RBP23.21■■□□□ 1.31
PRDM5-203ENST00000428209 IRX6P78412 446 aaPredicted RBP23.21■■□□□ 1.31
PRDM5-203ENST00000428209 QRICH2Q9H0J4 1663 aa23.19■■□□□ 1.3
PRDM5-203ENST00000428209 NUDCQ9Y266 331 aa23.19■■□□□ 1.3
PRDM5-203ENST00000428209 CLTCQ00610 1675 aaKnown RBP23.18■■□□□ 1.3
PRDM5-203ENST00000428209 PPP2R1AP30153 589 aa23.18■■□□□ 1.3
PRDM5-203ENST00000428209 STAG3Q9UJ98 1225 aa23.18■■□□□ 1.3
PRDM5-203ENST00000428209 NPC1L1Q9UHC9 1359 aa23.18■■□□□ 1.3
PRDM5-203ENST00000428209 SENP3Q9H4L4 574 aaPredicted RBP23.17■■□□□ 1.3
PRDM5-203ENST00000428209 ARHGEF40Q8TER5 1519 aa23.17■■□□□ 1.3
PRDM5-203ENST00000428209 CARD14Q9BXL6 1004 aa23.14■■□□□ 1.3
PRDM5-203ENST00000428209 ESF1Q9H501 851 aaKnown RBP23.11■■□□□ 1.29
PRDM5-203ENST00000428209 SALL2Q9Y467 1007 aaPredicted RBP23.11■■□□□ 1.29
PRDM5-203ENST00000428209 INSRP06213 1382 aa23.11■■□□□ 1.29
PRDM5-203ENST00000428209 ERICH6BQ5W0A0 696 aa23.11■■□□□ 1.29
PRDM5-203ENST00000428209 STK26Q9P289 416 aa23.11■■□□□ 1.29
PRDM5-203ENST00000428209 ARHGEF28Q8N1W1 1705 aaKnown RBP23.11■■□□□ 1.29
PRDM5-203ENST00000428209 EVC2Q86UK5 1308 aa23.1■■□□□ 1.29
PRDM5-203ENST00000428209 SLC12A5Q9H2X9 1139 aa23.09■■□□□ 1.29
PRDM5-203ENST00000428209 SPATA31D1Q6ZQQ2 1576 aa23.09■■□□□ 1.29
PRDM5-203ENST00000428209 BLMP54132 1417 aaPredicted RBP23.08■■□□□ 1.28
PRDM5-203ENST00000428209 SAFB2Q14151 953 aaKnown RBP eCLIP23.07■■□□□ 1.28
PRDM5-203ENST00000428209 ADAMTS8Q9UP79 889 aa23.07■■□□□ 1.28
PRDM5-203ENST00000428209 WDR43Q15061 677 aaKnown RBP eCLIP23.07■■□□□ 1.28
PRDM5-203ENST00000428209 PUS7Q96PZ0 661 aaKnown RBP23.06■■□□□ 1.28
PRDM5-203ENST00000428209 PDE3BQ13370 1112 aa23.04■■□□□ 1.28
PRDM5-203ENST00000428209 A2ML1A8K2U0 1454 aa23.04■■□□□ 1.28
PRDM5-203ENST00000428209 ZMYM3Q14202 1370 aa23.04■■□□□ 1.28
PRDM5-203ENST00000428209 NSD3Q9BZ95 1437 aa23.03■■□□□ 1.28
PRDM5-203ENST00000428209 TULP4Q9NRJ4 1543 aa23.03■■□□□ 1.28
PRDM5-203ENST00000428209 YTHDC2Q9H6S0 1430 aaKnown RBP23.02■■□□□ 1.28
PRDM5-203ENST00000428209 ALKQ9UM73 1620 aa23.02■■□□□ 1.28
PRDM5-203ENST00000428209 CABP2Q9NPB3 220 aa23.01■■□□□ 1.27
PRDM5-203ENST00000428209 PPP4R2Q9NY27 417 aa23.01■■□□□ 1.27
PRDM5-203ENST00000428209 POGKQ9P215 609 aa23■■□□□ 1.27
PRDM5-203ENST00000428209 RIMS2Q9UQ26 1411 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms