RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 IFT172Q9UG01 1749 aa27.03■■□□□ 1.92
PMPCB-202ENST00000428154 CNGB1Q14028 1251 aaPredicted RBP27.03■■□□□ 1.92
PMPCB-202ENST00000428154 PANK3Q9H999 370 aa27.03■■□□□ 1.92
PMPCB-202ENST00000428154 HECW2Q9P2P5 1572 aa27.03■■□□□ 1.92
PMPCB-202ENST00000428154 NEO1Q92859 1461 aa27.02■■□□□ 1.92
PMPCB-202ENST00000428154 PPRC1Q5VV67 1664 aaKnown RBP27.02■■□□□ 1.92
PMPCB-202ENST00000428154 IRX6P78412 446 aaPredicted RBP27■■□□□ 1.91
PMPCB-202ENST00000428154 NRXN1Q9ULB1 1477 aa26.98■■□□□ 1.91
PMPCB-202ENST00000428154 NPC1L1Q9UHC9 1359 aa26.98■■□□□ 1.91
PMPCB-202ENST00000428154 KDM5AP29375 1690 aaKnown RBP26.94■■□□□ 1.9
PMPCB-202ENST00000428154 ADGRB3O60242 1522 aa26.94■■□□□ 1.9
PMPCB-202ENST00000428154 ABCA6Q8N139 1617 aa26.94■■□□□ 1.9
PMPCB-202ENST00000428154 SETBP1Q9Y6X0 1596 aa26.94■■□□□ 1.9
PMPCB-202ENST00000428154 BLMP54132 1417 aaPredicted RBP26.94■■□□□ 1.9
PMPCB-202ENST00000428154 KNSTRNQ9Y448 316 aa26.93■■□□□ 1.9
PMPCB-202ENST00000428154 RBM19Q9Y4C8 960 aaKnown RBP26.93■■□□□ 1.9
PMPCB-202ENST00000428154 MYO3AQ8NEV4 1616 aa26.92■■□□□ 1.9
PMPCB-202ENST00000428154 FRMPD1Q5SYB0 1578 aa26.92■■□□□ 1.9
PMPCB-202ENST00000428154 SBNO2Q9Y2G9 1366 aa26.91■■□□□ 1.9
PMPCB-202ENST00000428154 ASXL1Q8IXJ9 1541 aa26.9■■□□□ 1.9
PMPCB-202ENST00000428154 RPGRIP1LQ68CZ1 1315 aa26.89■■□□□ 1.9
PMPCB-202ENST00000428154 CC2D1BQ5T0F9 858 aaKnown RBP26.89■■□□□ 1.9
PMPCB-202ENST00000428154 MROH2AA6NES4 1674 aa26.88■■□□□ 1.89
PMPCB-202ENST00000428154 MYOM1P52179 1685 aa26.87■■□□□ 1.89
PMPCB-202ENST00000428154 UGGT1Q9NYU2 1555 aa26.87■■□□□ 1.89
PMPCB-202ENST00000428154 NPATQ14207 1427 aa26.85■■□□□ 1.89
PMPCB-202ENST00000428154 PIK3C2GO75747 1445 aa26.84■■□□□ 1.89
PMPCB-202ENST00000428154 PPLO60437 1756 aa26.84■■□□□ 1.89
PMPCB-202ENST00000428154 ABCC3O15438 1527 aa26.84■■□□□ 1.89
PMPCB-202ENST00000428154 AMER1Q5JTC6 1135 aaPredicted RBP26.83■■□□□ 1.89
PMPCB-202ENST00000428154 ZC3H13Q5T200 1668 aaKnown RBP26.82■■□□□ 1.88
PMPCB-202ENST00000428154 ADGRF5Q8IZF2 1346 aa26.81■■□□□ 1.88
PMPCB-202ENST00000428154 CAMSAP1Q5T5Y3 1602 aa26.8■■□□□ 1.88
PMPCB-202ENST00000428154 CFAP70Q5T0N1 1121 aa26.8■■□□□ 1.88
PMPCB-202ENST00000428154 ARHGAP31Q2M1Z3 1444 aa26.79■■□□□ 1.88
PMPCB-202ENST00000428154 ERVK-7P63135 1459 aa26.79■■□□□ 1.88
PMPCB-202ENST00000428154 PPP2R1AP30153 589 aa26.78■■□□□ 1.88
PMPCB-202ENST00000428154 NOS1P29475 1434 aa26.78■■□□□ 1.88
PMPCB-202ENST00000428154 GLI2P10070 1586 aa26.78■■□□□ 1.88
PMPCB-202ENST00000428154 B4GALNT3Q6L9W6 998 aa26.77■■□□□ 1.88
PMPCB-202ENST00000428154 DIP2CQ9Y2E4 1556 aa26.77■■□□□ 1.88
PMPCB-202ENST00000428154 RICTORQ6R327 1708 aa26.75■■□□□ 1.87
PMPCB-202ENST00000428154 PIK3C2BO00750 1634 aa26.75■■□□□ 1.87
PMPCB-202ENST00000428154 FANCIQ9NVI1 1328 aa26.75■■□□□ 1.87
PMPCB-202ENST00000428154 RCAN3Q9UKA8 241 aa26.75■■□□□ 1.87
PMPCB-202ENST00000428154 C14orf93Q9H972 538 aaKnown RBP26.74■■□□□ 1.87
PMPCB-202ENST00000428154 RRP1P56182 461 aaKnown RBP26.73■■□□□ 1.87
PMPCB-202ENST00000428154 GGT6Q6P531 493 aa26.73■■□□□ 1.87
PMPCB-202ENST00000428154 WDR43Q15061 677 aaKnown RBP eCLIP26.72■■□□□ 1.87
PMPCB-202ENST00000428154 CCDC136Q96JN2 1154 aa26.71■■□□□ 1.87
PMPCB-202ENST00000428154 CENPJQ9HC77 1338 aaPredicted RBP26.71■■□□□ 1.87
PMPCB-202ENST00000428154 PUS7Q96PZ0 661 aaKnown RBP26.7■■□□□ 1.87
PMPCB-202ENST00000428154 ADGRB1O14514 1584 aa26.69■■□□□ 1.86
PMPCB-202ENST00000428154 NGEFQ8N5V2 710 aa26.68■■□□□ 1.86
PMPCB-202ENST00000428154 VGFO15240 615 aaPredicted RBP26.65■■□□□ 1.86
PMPCB-202ENST00000428154 CHGAP10645 457 aaKnown RBP26.65■■□□□ 1.86
PMPCB-202ENST00000428154 ADAMTS8Q9UP79 889 aa26.65■■□□□ 1.86
PMPCB-202ENST00000428154 ZFYVE9O95405 1425 aa26.65■■□□□ 1.86
PMPCB-202ENST00000428154 QRICH2Q9H0J4 1663 aa26.65■■□□□ 1.86
PMPCB-202ENST00000428154 CFAP65Q6ZU64 1925 aaKnown RBP26.64■■□□□ 1.86
PMPCB-202ENST00000428154 SIGLEC1Q9BZZ2 1709 aa26.63■■□□□ 1.85
PMPCB-202ENST00000428154 SLC52A1Q9NWF4 448 aa26.63■■□□□ 1.85
PMPCB-202ENST00000428154 RAPGEF3O95398 923 aa26.62■■□□□ 1.85
PMPCB-202ENST00000428154 NEXMIFQ5QGS0 1516 aa26.61■■□□□ 1.85
PMPCB-202ENST00000428154 ANP32EQ9BTT0 268 aa26.61■■□□□ 1.85
PMPCB-202ENST00000428154 USP32Q8NFA0 1604 aa26.6■■□□□ 1.85
PMPCB-202ENST00000428154 SALL2Q9Y467 1007 aaPredicted RBP26.58■■□□□ 1.85
PMPCB-202ENST00000428154 ZNF521Q96K83 1311 aa26.56■■□□□ 1.84
PMPCB-202ENST00000428154 CDCA7LQ96GN5 454 aa26.56■■□□□ 1.84
PMPCB-202ENST00000428154 POLR3AO14802 1390 aaPredicted RBP26.55■■□□□ 1.84
PMPCB-202ENST00000428154 REREQ9P2R6 1566 aa26.54■■□□□ 1.84
PMPCB-202ENST00000428154 SENP3-EIF4A1A0A087X0R7 540 aa26.53■■□□□ 1.84
PMPCB-202ENST00000428154 CARD14Q9BXL6 1004 aa26.53■■□□□ 1.84
PMPCB-202ENST00000428154 PPP6R1Q9UPN7 881 aa26.53■■□□□ 1.84
PMPCB-202ENST00000428154 ARHGEF28Q8N1W1 1705 aaKnown RBP26.52■■□□□ 1.84
PMPCB-202ENST00000428154 PREX1Q8TCU6 1659 aa26.52■■□□□ 1.84
PMPCB-202ENST00000428154 GOLGA2Q08379 1002 aa26.52■■□□□ 1.84
PMPCB-202ENST00000428154 TRAK1Q9UPV9 953 aa26.52■■□□□ 1.84
PMPCB-202ENST00000428154 EVC2Q86UK5 1308 aa26.5■■□□□ 1.83
PMPCB-202ENST00000428154 YEATS2Q9ULM3 1422 aa26.5■■□□□ 1.83
PMPCB-202ENST00000428154 NINLQ9Y2I6 1382 aa26.49■■□□□ 1.83
PMPCB-202ENST00000428154 NSD2O96028 1365 aa26.48■■□□□ 1.83
PMPCB-202ENST00000428154 PLEKHH1Q9ULM0 1364 aa26.48■■□□□ 1.83
PMPCB-202ENST00000428154 EXOC6Q8TAG9 804 aa26.48■■□□□ 1.83
PMPCB-202ENST00000428154 AGLP35573 1532 aa26.47■■□□□ 1.83
PMPCB-202ENST00000428154 NSD3Q9BZ95 1437 aa26.47■■□□□ 1.83
PMPCB-202ENST00000428154 TMEM131LA2VDJ0 1609 aa26.46■■□□□ 1.83
PMPCB-202ENST00000428154 IDI1Q13907 227 aa26.46■■□□□ 1.83
PMPCB-202ENST00000428154 DUSP27Q5VZP5 1158 aa26.46■■□□□ 1.83
PMPCB-202ENST00000428154 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.46■■□□□ 1.83
PMPCB-202ENST00000428154 DIP2BQ9P265 1576 aa26.46■■□□□ 1.83
PMPCB-202ENST00000428154 TRMT2AQ8IZ69 625 aaKnown RBP26.44■■□□□ 1.82
PMPCB-202ENST00000428154 SLFN5Q08AF3 891 aa26.43■■□□□ 1.82
PMPCB-202ENST00000428154 TMEM132EQ6IEE7 984 aa26.42■■□□□ 1.82
PMPCB-202ENST00000428154 CGNL1Q0VF96 1302 aa26.42■■□□□ 1.82
PMPCB-202ENST00000428154 ANKRD36BQ8N2N9 1353 aa26.42■■□□□ 1.82
PMPCB-202ENST00000428154 TCERG1O14776 1098 aaKnown RBP26.42■■□□□ 1.82
PMPCB-202ENST00000428154 MORC1Q86VD1 984 aa26.42■■□□□ 1.82
PMPCB-202ENST00000428154 RIMBP3CA6NJZ7 1639 aa26.4■■□□□ 1.82
PMPCB-202ENST00000428154 RIMBP3BA6NNM3 1639 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms