RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 STAG3Q9UJ98 1225 aa21.87■■□□□ 1.09
TVP23C-203ENST00000428082 MYO3AQ8NEV4 1616 aa21.87■■□□□ 1.09
TVP23C-203ENST00000428082 NBPF8Q3BBV2 869 aa21.86■■□□□ 1.09
TVP23C-203ENST00000428082 A2ML1A8K2U0 1454 aa21.86■■□□□ 1.09
TVP23C-203ENST00000428082 PPLO60437 1756 aa21.86■■□□□ 1.09
TVP23C-203ENST00000428082 UBR1Q8IWV7 1749 aa21.85■■□□□ 1.09
TVP23C-203ENST00000428082 KDM5AP29375 1690 aaKnown RBP21.84■■□□□ 1.09
TVP23C-203ENST00000428082 SETD1BQ9UPS6 1966 aaKnown RBP21.83■■□□□ 1.09
TVP23C-203ENST00000428082 UHRF1BP1Q6BDS2 1440 aa21.83■■□□□ 1.09
TVP23C-203ENST00000428082 NEXMIFQ5QGS0 1516 aa21.83■■□□□ 1.09
TVP23C-203ENST00000428082 RPGRIP1LQ68CZ1 1315 aa21.82■■□□□ 1.08
TVP23C-203ENST00000428082 PRAG1Q86YV5 1406 aa21.81■■□□□ 1.08
TVP23C-203ENST00000428082 MYOM2P54296 1465 aa21.8■■□□□ 1.08
TVP23C-203ENST00000428082 NUTM2DQ5VT03 806 aaPredicted RBP21.79■■□□□ 1.08
TVP23C-203ENST00000428082 STAC3Q96MF2 364 aa21.79■■□□□ 1.08
TVP23C-203ENST00000428082 CEP170BQ9Y4F5 1589 aaPredicted RBP21.79■■□□□ 1.08
TVP23C-203ENST00000428082 ADGRF5Q8IZF2 1346 aa21.78■■□□□ 1.08
TVP23C-203ENST00000428082 SUPT16HQ9Y5B9 1047 aaKnown RBP21.78■■□□□ 1.08
TVP23C-203ENST00000428082 HIRIP3Q9BW71 556 aaPredicted RBP21.78■■□□□ 1.08
TVP23C-203ENST00000428082 ZNF142P52746 1687 aaPredicted RBP21.76■■□□□ 1.07
TVP23C-203ENST00000428082 RIMS2Q9UQ26 1411 aa21.76■■□□□ 1.07
TVP23C-203ENST00000428082 TRPM1Q7Z4N2 1603 aa21.75■■□□□ 1.07
TVP23C-203ENST00000428082 NRXN1Q9ULB1 1477 aa21.75■■□□□ 1.07
TVP23C-203ENST00000428082 EIF4G2P78344 907 aaKnown RBP eCLIP21.74■■□□□ 1.07
TVP23C-203ENST00000428082 ZFYVE9O95405 1425 aa21.74■■□□□ 1.07
TVP23C-203ENST00000428082 VGFO15240 615 aaPredicted RBP21.74■■□□□ 1.07
TVP23C-203ENST00000428082 TMEM2Q9UHN6 1383 aa21.74■■□□□ 1.07
TVP23C-203ENST00000428082 RALGAPBQ86X10 1494 aa21.73■■□□□ 1.07
TVP23C-203ENST00000428082 THEMISQ8N1K5 641 aaPredicted RBP21.71■■□□□ 1.07
TVP23C-203ENST00000428082 PIK3C2GO75747 1445 aa21.71■■□□□ 1.07
TVP23C-203ENST00000428082 HSPA5P11021 654 aaKnown RBP21.69■■□□□ 1.06
TVP23C-203ENST00000428082 NBPF1Q3BBV0 1214 aa21.69■■□□□ 1.06
TVP23C-203ENST00000428082 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
TVP23C-203ENST00000428082 SLIT1O75093 1534 aa21.69■■□□□ 1.06
TVP23C-203ENST00000428082 ARHGAP23Q9P227 1491 aa21.69■■□□□ 1.06
TVP23C-203ENST00000428082 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.68■■□□□ 1.06
TVP23C-203ENST00000428082 KIAA1210Q9ULL0 1709 aa21.68■■□□□ 1.06
TVP23C-203ENST00000428082 ROCK2O75116 1388 aaKnown RBP21.67■■□□□ 1.06
TVP23C-203ENST00000428082 CFAP70Q5T0N1 1121 aa21.67■■□□□ 1.06
TVP23C-203ENST00000428082 LTKP29376 864 aa21.67■■□□□ 1.06
TVP23C-203ENST00000428082 HDGFP51858 240 aaKnown RBP21.66■■□□□ 1.06
TVP23C-203ENST00000428082 TXNDC2Q86VQ3 553 aa21.64■■□□□ 1.05
TVP23C-203ENST00000428082 CARD11Q9BXL7 1154 aa21.63■■□□□ 1.05
TVP23C-203ENST00000428082 C14orf93Q9H972 538 aaKnown RBP21.63■■□□□ 1.05
TVP23C-203ENST00000428082 EID1Q9Y6B2 187 aa21.63■■□□□ 1.05
TVP23C-203ENST00000428082 GPRASP1Q5JY77 1395 aa21.62■■□□□ 1.05
TVP23C-203ENST00000428082 NRXN3Q9Y4C0 1643 aa21.61■■□□□ 1.05
TVP23C-203ENST00000428082 WASHC2AQ641Q2 1341 aa21.61■■□□□ 1.05
TVP23C-203ENST00000428082 LAMC1P11047 1609 aa21.61■■□□□ 1.05
TVP23C-203ENST00000428082 IQGAP1P46940 1657 aa21.6■■□□□ 1.05
TVP23C-203ENST00000428082 ALKQ9UM73 1620 aa21.6■■□□□ 1.05
TVP23C-203ENST00000428082 SCAF11Q99590 1463 aaKnown RBP21.6■■□□□ 1.05
TVP23C-203ENST00000428082 SETBP1Q9Y6X0 1596 aa21.59■■□□□ 1.05
TVP23C-203ENST00000428082 PLEKHG1Q9ULL1 1385 aa21.58■■□□□ 1.05
TVP23C-203ENST00000428082 NEFLP07196 543 aa21.58■■□□□ 1.04
TVP23C-203ENST00000428082 ADGRB1O14514 1584 aa21.58■■□□□ 1.04
TVP23C-203ENST00000428082 SETD1AO15047 1707 aaKnown RBP21.57■■□□□ 1.04
TVP23C-203ENST00000428082 USP47Q96K76 1375 aa21.57■■□□□ 1.04
TVP23C-203ENST00000428082 TMEM132EQ6IEE7 984 aa21.57■■□□□ 1.04
TVP23C-203ENST00000428082 LMTK3Q96Q04 1460 aa21.56■■□□□ 1.04
TVP23C-203ENST00000428082 ANKLE2Q86XL3 938 aa21.56■■□□□ 1.04
TVP23C-203ENST00000428082 BCANQ96GW7 911 aa21.56■■□□□ 1.04
TVP23C-203ENST00000428082 ASXL1Q8IXJ9 1541 aa21.56■■□□□ 1.04
TVP23C-203ENST00000428082 CCDC7Q96M83 1385 aa21.55■■□□□ 1.04
TVP23C-203ENST00000428082 ADAMTS13Q76LX8 1427 aa21.54■■□□□ 1.04
TVP23C-203ENST00000428082 POLR1AO95602 1720 aaPredicted RBP21.54■■□□□ 1.04
TVP23C-203ENST00000428082 HSPA2P54652 639 aa21.53■■□□□ 1.04
TVP23C-203ENST00000428082 SLC26A8Q96RN1 970 aa21.5■■□□□ 1.03
TVP23C-203ENST00000428082 MED14O60244 1454 aa21.5■■□□□ 1.03
TVP23C-203ENST00000428082 NCKAP5LQ9HCH0 1330 aa21.5■■□□□ 1.03
TVP23C-203ENST00000428082 METP08581 1390 aa21.49■■□□□ 1.03
TVP23C-203ENST00000428082 ST20-MTHFSA0A0A6YYL1 179 aa21.49■■□□□ 1.03
TVP23C-203ENST00000428082 MYT1Q01538 1121 aa21.49■■□□□ 1.03
TVP23C-203ENST00000428082 FKBP8Q14318 412 aa21.47■■□□□ 1.03
TVP23C-203ENST00000428082 TRAK1Q9UPV9 953 aa21.47■■□□□ 1.03
TVP23C-203ENST00000428082 YTHDC2Q9H6S0 1430 aaKnown RBP21.46■■□□□ 1.03
TVP23C-203ENST00000428082 STK26Q9P289 416 aa21.46■■□□□ 1.03
TVP23C-203ENST00000428082 NPHP4O75161 1426 aaPredicted RBP21.46■■□□□ 1.03
TVP23C-203ENST00000428082 DIP2AQ14689 1571 aa21.46■■□□□ 1.03
TVP23C-203ENST00000428082 TBX22Q9Y458 520 aa21.45■■□□□ 1.02
TVP23C-203ENST00000428082 ARHGEF28Q8N1W1 1705 aaKnown RBP21.44■■□□□ 1.02
TVP23C-203ENST00000428082 EIF3AQ14152 1382 aaKnown RBP21.43■■□□□ 1.02
TVP23C-203ENST00000428082 LRPPRCP42704 1394 aaKnown RBP21.42■■□□□ 1.02
TVP23C-203ENST00000428082 STRCQ7RTU9 1775 aa21.41■■□□□ 1.02
TVP23C-203ENST00000428082 HNRNPUQ00839 825 aaKnown RBP eCLIP21.41■■□□□ 1.02
TVP23C-203ENST00000428082 PRKRIP1Q9H875 184 aaPredicted RBP21.41■■□□□ 1.02
TVP23C-203ENST00000428082 PTPRUQ92729 1446 aa21.4■■□□□ 1.02
TVP23C-203ENST00000428082 KIF7Q2M1P5 1343 aa21.4■■□□□ 1.02
TVP23C-203ENST00000428082 C11orf95C9JLR9 678 aaPredicted RBP21.39■■□□□ 1.02
TVP23C-203ENST00000428082 TESK2Q96S53 571 aa21.39■■□□□ 1.02
TVP23C-203ENST00000428082 ABCC11Q96J66 1382 aa21.39■■□□□ 1.01
TVP23C-203ENST00000428082 KNDC1Q76NI1 1749 aa21.38■■□□□ 1.01
TVP23C-203ENST00000428082 CENPJQ9HC77 1338 aaPredicted RBP21.38■■□□□ 1.01
TVP23C-203ENST00000428082 QRICH2Q9H0J4 1663 aa21.37■■□□□ 1.01
TVP23C-203ENST00000428082 DLC1Q96QB1 1528 aa21.37■■□□□ 1.01
TVP23C-203ENST00000428082 TECPR2O15040 1411 aa21.36■■□□□ 1.01
TVP23C-203ENST00000428082 CHD2O14647 1828 aaKnown RBP21.35■■□□□ 1.01
TVP23C-203ENST00000428082 PIK3R4Q99570 1358 aa21.35■■□□□ 1.01
TVP23C-203ENST00000428082 CPS1P31327 1500 aa21.35■■□□□ 1.01
TVP23C-203ENST00000428082 PRAM1Q96QH2 718 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms