RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 IQGAP1P46940 1657 aa17.2■□□□□ 0.34
RFC4-206ENST00000427785 A2ML1A8K2U0 1454 aa17.19■□□□□ 0.34
RFC4-206ENST00000427785 NRXN1Q9ULB1 1477 aa17.19■□□□□ 0.34
RFC4-206ENST00000427785 POLR1AO95602 1720 aaPredicted RBP17.18■□□□□ 0.34
RFC4-206ENST00000427785 NLRP1Q9C000 1473 aa17.18■□□□□ 0.34
RFC4-206ENST00000427785 CEP170BQ9Y4F5 1589 aaPredicted RBP17.16■□□□□ 0.34
RFC4-206ENST00000427785 ZNF316A6NFI3 1004 aaPredicted RBP17.15■□□□□ 0.34
RFC4-206ENST00000427785 ROCK2O75116 1388 aaKnown RBP17.15■□□□□ 0.34
RFC4-206ENST00000427785 PIK3C2GO75747 1445 aa17.14■□□□□ 0.33
RFC4-206ENST00000427785 ADGRF5Q8IZF2 1346 aa17.14■□□□□ 0.33
RFC4-206ENST00000427785 SETD1BQ9UPS6 1966 aaKnown RBP17.13■□□□□ 0.33
RFC4-206ENST00000427785 SETD1AO15047 1707 aaKnown RBP17.13■□□□□ 0.33
RFC4-206ENST00000427785 PTPRMP28827 1452 aa17.13■□□□□ 0.33
RFC4-206ENST00000427785 STAG3Q9UJ98 1225 aa17.13■□□□□ 0.33
RFC4-206ENST00000427785 RPGRIP1LQ68CZ1 1315 aa17.12■□□□□ 0.33
RFC4-206ENST00000427785 USP47Q96K76 1375 aa17.12■□□□□ 0.33
RFC4-206ENST00000427785 RIMS2Q9UQ26 1411 aa17.12■□□□□ 0.33
RFC4-206ENST00000427785 NRXN3Q9Y4C0 1643 aa17.11■□□□□ 0.33
RFC4-206ENST00000427785 NUTM2DQ5VT03 806 aaPredicted RBP17.11■□□□□ 0.33
RFC4-206ENST00000427785 GPRASP1Q5JY77 1395 aa17.11■□□□□ 0.33
RFC4-206ENST00000427785 ZFYVE9O95405 1425 aa17.11■□□□□ 0.33
RFC4-206ENST00000427785 SETBP1Q9Y6X0 1596 aa17.11■□□□□ 0.33
RFC4-206ENST00000427785 HIRIP3Q9BW71 556 aaPredicted RBP17.1■□□□□ 0.33
RFC4-206ENST00000427785 HSPA5P11021 654 aaKnown RBP17.09■□□□□ 0.33
RFC4-206ENST00000427785 ASXL1Q8IXJ9 1541 aa17.09■□□□□ 0.33
RFC4-206ENST00000427785 NBPF1Q3BBV0 1214 aa17.08■□□□□ 0.32
RFC4-206ENST00000427785 STAC3Q96MF2 364 aa17.08■□□□□ 0.32
RFC4-206ENST00000427785 CARD11Q9BXL7 1154 aa17.08■□□□□ 0.32
RFC4-206ENST00000427785 ARHGEF28Q8N1W1 1705 aaKnown RBP17.07■□□□□ 0.32
RFC4-206ENST00000427785 ADGRB1O14514 1584 aa17.07■□□□□ 0.32
RFC4-206ENST00000427785 EIF4G2P78344 907 aaKnown RBP eCLIP17.07■□□□□ 0.32
RFC4-206ENST00000427785 SLIT1O75093 1534 aa17.06■□□□□ 0.32
RFC4-206ENST00000427785 SENP3Q9H4L4 574 aaPredicted RBP17.05■□□□□ 0.32
RFC4-206ENST00000427785 ALKQ9UM73 1620 aa17.05■□□□□ 0.32
RFC4-206ENST00000427785 TMEM2Q9UHN6 1383 aa17.04■□□□□ 0.32
RFC4-206ENST00000427785 CFAP70Q5T0N1 1121 aa17.04■□□□□ 0.32
RFC4-206ENST00000427785 ARHGAP23Q9P227 1491 aa17.04■□□□□ 0.32
RFC4-206ENST00000427785 QRICH2Q9H0J4 1663 aa17.04■□□□□ 0.32
RFC4-206ENST00000427785 SCAF11Q99590 1463 aaKnown RBP17.03■□□□□ 0.32
RFC4-206ENST00000427785 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.32
RFC4-206ENST00000427785 KNDC1Q76NI1 1749 aa16.99■□□□□ 0.31
RFC4-206ENST00000427785 C14orf93Q9H972 538 aaKnown RBP16.98■□□□□ 0.31
RFC4-206ENST00000427785 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.96■□□□□ 0.31
RFC4-206ENST00000427785 EIF3AQ14152 1382 aaKnown RBP16.95■□□□□ 0.3
RFC4-206ENST00000427785 PLEKHG1Q9ULL1 1385 aa16.95■□□□□ 0.3
RFC4-206ENST00000427785 KDM4FA0A1W2PPD8 638 aa16.95■□□□□ 0.3
RFC4-206ENST00000427785 DIP2AQ14689 1571 aa16.94■□□□□ 0.3
RFC4-206ENST00000427785 ST20-MTHFSA0A0A6YYL1 179 aa16.94■□□□□ 0.3
RFC4-206ENST00000427785 TMEM132EQ6IEE7 984 aa16.94■□□□□ 0.3
RFC4-206ENST00000427785 CCDC7Q96M83 1385 aa16.93■□□□□ 0.3
RFC4-206ENST00000427785 ADAMTS13Q76LX8 1427 aa16.93■□□□□ 0.3
RFC4-206ENST00000427785 LTKP29376 864 aa16.92■□□□□ 0.3
RFC4-206ENST00000427785 THEMISQ8N1K5 641 aaPredicted RBP16.92■□□□□ 0.3
RFC4-206ENST00000427785 WASHC2AQ641Q2 1341 aa16.92■□□□□ 0.3
RFC4-206ENST00000427785 YTHDC2Q9H6S0 1430 aaKnown RBP16.91■□□□□ 0.3
RFC4-206ENST00000427785 MYOM1P52179 1685 aa16.91■□□□□ 0.3
RFC4-206ENST00000427785 C11orf95C9JLR9 678 aaPredicted RBP16.9■□□□□ 0.3
RFC4-206ENST00000427785 HDGFP51858 240 aaKnown RBP16.9■□□□□ 0.3
RFC4-206ENST00000427785 DIEXFQ68CQ4 756 aaKnown RBP16.9■□□□□ 0.3
RFC4-206ENST00000427785 TXNDC2Q86VQ3 553 aa16.9■□□□□ 0.3
RFC4-206ENST00000427785 EID1Q9Y6B2 187 aa16.9■□□□□ 0.3
RFC4-206ENST00000427785 KIF7Q2M1P5 1343 aa16.9■□□□□ 0.3
RFC4-206ENST00000427785 CPS1P31327 1500 aa16.9■□□□□ 0.3
RFC4-206ENST00000427785 DISP3Q9P2K9 1392 aa16.89■□□□□ 0.3
RFC4-206ENST00000427785 BCANQ96GW7 911 aa16.89■□□□□ 0.29
RFC4-206ENST00000427785 XRN1Q8IZH2 1706 aaKnown RBP16.89■□□□□ 0.29
RFC4-206ENST00000427785 DLC1Q96QB1 1528 aa16.89■□□□□ 0.29
RFC4-206ENST00000427785 MED14O60244 1454 aa16.88■□□□□ 0.29
RFC4-206ENST00000427785 TRAK1Q9UPV9 953 aa16.88■□□□□ 0.29
RFC4-206ENST00000427785 METP08581 1390 aa16.88■□□□□ 0.29
RFC4-206ENST00000427785 TESK2Q96S53 571 aa16.87■□□□□ 0.29
RFC4-206ENST00000427785 STK26Q9P289 416 aa16.86■□□□□ 0.29
RFC4-206ENST00000427785 LRPPRCP42704 1394 aaKnown RBP16.86■□□□□ 0.29
RFC4-206ENST00000427785 LMTK3Q96Q04 1460 aa16.86■□□□□ 0.29
RFC4-206ENST00000427785 TULP4Q9NRJ4 1543 aa16.86■□□□□ 0.29
RFC4-206ENST00000427785 CHD2O14647 1828 aaKnown RBP16.85■□□□□ 0.29
RFC4-206ENST00000427785 DDX10Q13206 875 aaKnown RBP16.85■□□□□ 0.29
RFC4-206ENST00000427785 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
RFC4-206ENST00000427785 CENPJQ9HC77 1338 aaPredicted RBP16.85■□□□□ 0.29
RFC4-206ENST00000427785 SBNO2Q9Y2G9 1366 aa16.83■□□□□ 0.28
RFC4-206ENST00000427785 TECPR2O15040 1411 aa16.82■□□□□ 0.28
RFC4-206ENST00000427785 NPHP4O75161 1426 aaPredicted RBP16.82■□□□□ 0.28
RFC4-206ENST00000427785 PTPRUQ92729 1446 aa16.82■□□□□ 0.28
RFC4-206ENST00000427785 SLC26A8Q96RN1 970 aa16.82■□□□□ 0.28
RFC4-206ENST00000427785 STRCQ7RTU9 1775 aa16.82■□□□□ 0.28
RFC4-206ENST00000427785 TMF1P82094 1093 aa16.8■□□□□ 0.28
RFC4-206ENST00000427785 ANKLE2Q86XL3 938 aa16.8■□□□□ 0.28
RFC4-206ENST00000427785 PLEKHH1Q9ULM0 1364 aa16.79■□□□□ 0.28
RFC4-206ENST00000427785 SAFB2Q14151 953 aaKnown RBP eCLIP16.79■□□□□ 0.28
RFC4-206ENST00000427785 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.79■□□□□ 0.28
RFC4-206ENST00000427785 ABCC11Q96J66 1382 aa16.78■□□□□ 0.28
RFC4-206ENST00000427785 PRAM1Q96QH2 718 aa16.78■□□□□ 0.28
RFC4-206ENST00000427785 ADGRB2O60241 1585 aa16.77■□□□□ 0.28
RFC4-206ENST00000427785 NWD1Q149M9 1564 aa16.77■□□□□ 0.28
RFC4-206ENST00000427785 NCKAP5LQ9HCH0 1330 aa16.77■□□□□ 0.28
RFC4-206ENST00000427785 HSPA2P54652 639 aa16.76■□□□□ 0.27
RFC4-206ENST00000427785 PTCH1Q13635 1447 aa16.76■□□□□ 0.27
RFC4-206ENST00000427785 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
RFC4-206ENST00000427785 ROBO2Q9HCK4 1378 aa16.76■□□□□ 0.27
RFC4-206ENST00000427785 STRCP1A6NGW2 1772 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms