RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 LAS1LQ9Y4W2 734 aaKnown RBP22.66■■□□□ 1.22
RARA-206ENST00000425707 CEP152O94986 1710 aa22.65■■□□□ 1.22
RARA-206ENST00000425707 PPP2R1AP30153 589 aa22.65■■□□□ 1.22
RARA-206ENST00000425707 PLEKHH1Q9ULM0 1364 aa22.64■■□□□ 1.22
RARA-206ENST00000425707 NEURL4Q96JN8 1562 aa22.64■■□□□ 1.22
RARA-206ENST00000425707 TRPM2O94759 1503 aa22.63■■□□□ 1.21
RARA-206ENST00000425707 FAM161AQ3B820 660 aa22.63■■□□□ 1.21
RARA-206ENST00000425707 MYOM1P52179 1685 aa22.63■■□□□ 1.21
RARA-206ENST00000425707 SHROOM2Q13796 1616 aa22.63■■□□□ 1.21
RARA-206ENST00000425707 VIRMAQ69YN4 1812 aaKnown RBP22.62■■□□□ 1.21
RARA-206ENST00000425707 SCAF11Q99590 1463 aaKnown RBP22.62■■□□□ 1.21
RARA-206ENST00000425707 GOLGA2Q08379 1002 aa22.62■■□□□ 1.21
RARA-206ENST00000425707 WDR43Q15061 677 aaKnown RBP eCLIP22.62■■□□□ 1.21
RARA-206ENST00000425707 AMER1Q5JTC6 1135 aaPredicted RBP22.62■■□□□ 1.21
RARA-206ENST00000425707 TRMT2AQ8IZ69 625 aaKnown RBP22.62■■□□□ 1.21
RARA-206ENST00000425707 NGEFQ8N5V2 710 aa22.62■■□□□ 1.21
RARA-206ENST00000425707 KNSTRNQ9Y448 316 aa22.62■■□□□ 1.21
RARA-206ENST00000425707 C20orf194Q5TEA3 1177 aa22.6■■□□□ 1.21
RARA-206ENST00000425707 SLFN5Q08AF3 891 aa22.58■■□□□ 1.21
RARA-206ENST00000425707 PTPRTO14522 1441 aa22.57■■□□□ 1.2
RARA-206ENST00000425707 SLC24A1O60721 1099 aa22.57■■□□□ 1.2
RARA-206ENST00000425707 KDM5AP29375 1690 aaKnown RBP22.57■■□□□ 1.2
RARA-206ENST00000425707 C8orf34Q49A92 452 aa22.57■■□□□ 1.2
RARA-206ENST00000425707 NKTRP30414 1462 aaKnown RBP22.56■■□□□ 1.2
RARA-206ENST00000425707 GSE1Q14687 1217 aa22.55■■□□□ 1.2
RARA-206ENST00000425707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.55■■□□□ 1.29e-7■□□□□ 9.1
RARA-206ENST00000425707 DEPDC5O75140 1603 aa22.55■■□□□ 1.2
RARA-206ENST00000425707 ABCC1P33527 1531 aa22.55■■□□□ 1.2
RARA-206ENST00000425707 NINLQ9Y2I6 1382 aa22.55■■□□□ 1.2
RARA-206ENST00000425707 NFKBIBQ15653 356 aa22.54■■□□□ 1.2
RARA-206ENST00000425707 PLCH2O75038 1416 aa22.54■■□□□ 1.2
RARA-206ENST00000425707 DAXXQ9UER7 740 aaPredicted RBP22.53■■□□□ 1.2
RARA-206ENST00000425707 RTEL1-TNFRSF6BF6WH68 1400 aa22.52■■□□□ 1.2
RARA-206ENST00000425707 TET3O43151 1660 aa22.51■■□□□ 1.19
RARA-206ENST00000425707 CHD1O14646 1710 aa22.51■■□□□ 1.19
RARA-206ENST00000425707 IL27Q8NEV9 243 aa22.5■■□□□ 1.19
RARA-206ENST00000425707 ARAP3Q8WWN8 1544 aa22.5■■□□□ 1.19
RARA-206ENST00000425707 CLTCL1P53675 1640 aa22.49■■□□□ 1.19
RARA-206ENST00000425707 SKAP1Q86WV1 359 aa22.48■■□□□ 1.19
RARA-206ENST00000425707 E9PSI1 815 aa22.47■■□□□ 1.19
RARA-206ENST00000425707 OSCARQ8IYS5 282 aa22.47■■□□□ 1.19
RARA-206ENST00000425707 VWDEQ8N2E2 1590 aa22.46■■□□□ 1.19
RARA-206ENST00000425707 ZMYM3Q14202 1370 aa22.45■■□□□ 1.18
RARA-206ENST00000425707 PDE3AQ14432 1141 aa22.45■■□□□ 1.18
RARA-206ENST00000425707 MYOM2P54296 1465 aa22.45■■□□□ 1.18
RARA-206ENST00000425707 MYO3AQ8NEV4 1616 aa22.44■■□□□ 1.18
RARA-206ENST00000425707 CGNL1Q0VF96 1302 aa22.44■■□□□ 1.18
RARA-206ENST00000425707 AAMPQ13685 434 aa22.44■■□□□ 1.18
RARA-206ENST00000425707 EFCAB2Q5VUJ9 269 aa22.43■■□□□ 1.18
RARA-206ENST00000425707 ZFYVE16Q7Z3T8 1539 aa22.43■■□□□ 1.18
RARA-206ENST00000425707 UHRF1BP1LA0JNW5 1464 aa22.42■■□□□ 1.18
RARA-206ENST00000425707 MAP3K4Q9Y6R4 1608 aa22.41■■□□□ 1.18
RARA-206ENST00000425707 MAPK8IP3Q9UPT6 1336 aa22.41■■□□□ 1.18
RARA-206ENST00000425707 ZCCHC11Q5TAX3 1644 aaKnown RBP22.4■■□□□ 1.18
RARA-206ENST00000425707 SBNO2Q9Y2G9 1366 aa22.39■■□□□ 1.18
RARA-206ENST00000425707 POLR3AO14802 1390 aaPredicted RBP22.39■■□□□ 1.17
RARA-206ENST00000425707 IFT172Q9UG01 1749 aa22.39■■□□□ 1.17
RARA-206ENST00000425707 ERVK-7P63135 1459 aa22.38■■□□□ 1.17
RARA-206ENST00000425707 TRAPPC8Q9Y2L5 1435 aa22.38■■□□□ 1.17
RARA-206ENST00000425707 FRAT1Q92837 279 aaPredicted RBP22.36■■□□□ 1.17
RARA-206ENST00000425707 ABCA6Q8N139 1617 aa22.36■■□□□ 1.17
RARA-206ENST00000425707 APAF1O14727 1248 aa22.36■■□□□ 1.17
RARA-206ENST00000425707 SLC4A3P48751 1232 aa22.34■■□□□ 1.17
RARA-206ENST00000425707 SPINK5Q9NQ38 1064 aaPredicted RBP22.34■■□□□ 1.17
RARA-206ENST00000425707 INO80Q9ULG1 1556 aaPredicted RBP22.34■■□□□ 1.17
RARA-206ENST00000425707 NRXN1Q9ULB1 1477 aa22.33■■□□□ 1.17
RARA-206ENST00000425707 KIF1BO60333 1816 aa22.33■■□□□ 1.17
RARA-206ENST00000425707 ERCC6L2Q5T890 1561 aa22.33■■□□□ 1.16
RARA-206ENST00000425707 SHPRHQ149N8 1683 aa22.33■■□□□ 1.16
RARA-206ENST00000425707 USP19O94966 1318 aa22.32■■□□□ 1.16
RARA-206ENST00000425707 RGS3P49796 1198 aa22.32■■□□□ 1.16
RARA-206ENST00000425707 KANK1Q14678 1352 aa22.32■■□□□ 1.16
RARA-206ENST00000425707 SPAG9O60271 1321 aaKnown RBP22.32■■□□□ 1.16
RARA-206ENST00000425707 NCBP3Q53F19 620 aaKnown RBP22.32■■□□□ 1.16
RARA-206ENST00000425707 USP32Q8NFA0 1604 aa22.32■■□□□ 1.16
RARA-206ENST00000425707 SETBP1Q9Y6X0 1596 aa22.31■■□□□ 1.16
RARA-206ENST00000425707 BCAR3O75815 825 aa22.31■■□□□ 1.16
RARA-206ENST00000425707 CLUAP1Q96AJ1 413 aa22.31■■□□□ 1.16
RARA-206ENST00000425707 CCDC146Q8IYE0 955 aa22.31■■□□□ 1.16
RARA-206ENST00000425707 CENPJQ9HC77 1338 aaPredicted RBP22.3■■□□□ 1.16
RARA-206ENST00000425707 ANO8Q9HCE9 1232 aaPredicted RBP22.29■■□□□ 1.16
RARA-206ENST00000425707 NLRP1Q9C000 1473 aa22.29■■□□□ 1.16
RARA-206ENST00000425707 IGHDP01880 384 aa22.28■■□□□ 1.16
RARA-206ENST00000425707 BECN1Q14457 450 aa22.28■■□□□ 1.16
RARA-206ENST00000425707 BRPF3Q9ULD4 1205 aa22.28■■□□□ 1.16
RARA-206ENST00000425707 IQSEC2Q5JU85 1478 aa22.28■■□□□ 1.16
RARA-206ENST00000425707 FRAT2O75474 233 aaPredicted RBP22.28■■□□□ 1.16
RARA-206ENST00000425707 ATP7AQ04656 1500 aa22.27■■□□□ 1.16
RARA-206ENST00000425707 ZC3H13Q5T200 1668 aaKnown RBP22.27■■□□□ 1.15
RARA-206ENST00000425707 PMFBP1Q8TBY8 1022 aa22.26■■□□□ 1.15
RARA-206ENST00000425707 MROH1Q8NDA8 1641 aa22.26■■□□□ 1.15
RARA-206ENST00000425707 WWC1Q8IX03 1113 aa22.26■■□□□ 1.15
RARA-206ENST00000425707 PHF23Q9BUL5 403 aaPredicted RBP22.25■■□□□ 1.15
RARA-206ENST00000425707 CARD14Q9BXL6 1004 aa22.25■■□□□ 1.15
RARA-206ENST00000425707 ABCA9Q8IUA7 1624 aa22.25■■□□□ 1.15
RARA-206ENST00000425707 RTN4Q9NQC3 1192 aaKnown RBP22.23■■□□□ 1.15
RARA-206ENST00000425707 EFCAB6Q5THR3 1501 aa22.23■■□□□ 1.15
RARA-206ENST00000425707 LMTK2Q8IWU2 1503 aa22.22■■□□□ 1.15
RARA-206ENST00000425707 WDR63Q8IWG1 891 aa22.22■■□□□ 1.15
RARA-206ENST00000425707 CCDC27Q2M243 656 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 268.1 ms