RNA–Protein interactions for RNA: ENST00000425416.6

LPIN1-207, Transcript of lipin 1, humanhuman

TSL 2 BASIC

Gene LPIN1, Length 5,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN1-207ENST00000425416 R3HCC1Q9Y3T6 440 aaKnown RBP11.54□□□□□ -0.56
LPIN1-207ENST00000425416 EID1Q9Y6B2 187 aa11.54□□□□□ -0.56
LPIN1-207ENST00000425416 MROH2BQ7Z745 1585 aa11.54□□□□□ -0.56
LPIN1-207ENST00000425416 NUCB2P80303 420 aa11.54□□□□□ -0.56
LPIN1-207ENST00000425416 RRP7BPQ9NSQ0 103 aa11.54□□□□□ -0.56
LPIN1-207ENST00000425416 PPM1EQ8WY54 764 aa11.54□□□□□ -0.56
LPIN1-207ENST00000425416 EIF4G1Q04637 1599 aaKnown RBP11.54□□□□□ -0.56
LPIN1-207ENST00000425416 POLR3GO15318 223 aaPredicted RBP11.54□□□□□ -0.56
LPIN1-207ENST00000425416 CCDC43Q96MW1 224 aaKnown RBP11.54□□□□□ -0.56
LPIN1-207ENST00000425416 REC8O95072 547 aa11.53□□□□□ -0.56
LPIN1-207ENST00000425416 FAM107BQ9H098 131 aa11.53□□□□□ -0.56
LPIN1-207ENST00000425416 NAP1L1P55209 391 aaKnown RBP11.53□□□□□ -0.56
LPIN1-207ENST00000425416 SEPT7Q16181 437 aaKnown RBP11.53□□□□□ -0.56
LPIN1-207ENST00000425416 FAM13BQ9NYF5 915 aa11.53□□□□□ -0.56
LPIN1-207ENST00000425416 STAC3Q96MF2 364 aa11.53□□□□□ -0.56
LPIN1-207ENST00000425416 CCDC18Q5T9S5 1454 aa11.52□□□□□ -0.56
LPIN1-207ENST00000425416 TRIM34Q9BYJ4 488 aa11.52□□□□□ -0.56
LPIN1-207ENST00000425416 CENPQQ7L2Z9 268 aaPredicted RBP11.52□□□□□ -0.57
LPIN1-207ENST00000425416 GIMAP7Q8NHV1 300 aa11.52□□□□□ -0.57
LPIN1-207ENST00000425416 SLC26A8Q96RN1 970 aa11.52□□□□□ -0.57
LPIN1-207ENST00000425416 SOGA1O94964 1423 aa11.52□□□□□ -0.57
LPIN1-207ENST00000425416 ZKSCAN1P17029 563 aaPredicted RBP11.52□□□□□ -0.57
LPIN1-207ENST00000425416 CCDC73Q6ZRK6 1079 aa11.52□□□□□ -0.57
LPIN1-207ENST00000425416 CHMP5Q9NZZ3 219 aa11.52□□□□□ -0.57
LPIN1-207ENST00000425416 AAMPQ13685 434 aa11.52□□□□□ -0.57
LPIN1-207ENST00000425416 LMOD2Q6P5Q4 547 aa11.52□□□□□ -0.57
LPIN1-207ENST00000425416 PDCL2Q8N4E4 241 aa11.52□□□□□ -0.57
LPIN1-207ENST00000425416 SAFBQ15424 915 aaKnown RBP eCLIP11.51□□□□□ -0.57
LPIN1-207ENST00000425416 CC2D1BQ5T0F9 858 aaKnown RBP11.51□□□□□ -0.57
LPIN1-207ENST00000425416 WWC2Q6AWC2 1192 aa11.51□□□□□ -0.57
LPIN1-207ENST00000425416 CFAP57Q96MR6 1250 aa11.51□□□□□ -0.57
LPIN1-207ENST00000425416 PLCD4Q9BRC7 762 aa11.51□□□□□ -0.57
LPIN1-207ENST00000425416 BRMS1Q9HCU9 246 aa11.51□□□□□ -0.57
LPIN1-207ENST00000425416 STAMBPO95630 424 aa11.51□□□□□ -0.57
LPIN1-207ENST00000425416 EPS15P42566 896 aa11.51□□□□□ -0.57
LPIN1-207ENST00000425416 FOXD1Q16676 465 aa11.51□□□□□ -0.57
LPIN1-207ENST00000425416 OFD1O75665 1012 aa11.51□□□□□ -0.57
LPIN1-207ENST00000425416 CCDC91Q7Z6B0 441 aa11.51□□□□□ -0.57
LPIN1-207ENST00000425416 TOMM22Q9NS69 142 aa11.51□□□□□ -0.57
LPIN1-207ENST00000425416 IFT57Q9NWB7 429 aa11.5□□□□□ -0.57
LPIN1-207ENST00000425416 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.5□□□□□ -0.57
LPIN1-207ENST00000425416 ROCK1Q13464 1354 aa11.5□□□□□ -0.57
LPIN1-207ENST00000425416 CT47B1P0C2W7 299 aaPredicted RBP11.5□□□□□ -0.57
LPIN1-207ENST00000425416 FAM161AQ3B820 660 aa11.5□□□□□ -0.57
LPIN1-207ENST00000425416 FILIP1LQ4L180 1135 aa11.5□□□□□ -0.57
LPIN1-207ENST00000425416 ROCK2O75116 1388 aaKnown RBP11.5□□□□□ -0.57
LPIN1-207ENST00000425416 HMGB1P09429 215 aaKnown RBP11.49□□□□□ -0.57
LPIN1-207ENST00000425416 TOP2AP11388 1531 aaKnown RBP11.49□□□□□ -0.57
LPIN1-207ENST00000425416 GBP2P32456 591 aaPredicted RBP11.49□□□□□ -0.57
LPIN1-207ENST00000425416 CLASRPQ8N2M8 674 aaKnown RBP11.49□□□□□ -0.57
LPIN1-207ENST00000425416 CADPSQ9ULU8 1353 aa11.49□□□□□ -0.57
LPIN1-207ENST00000425416 KIF3BO15066 747 aa11.49□□□□□ -0.57
LPIN1-207ENST00000425416 CENPJQ9HC77 1338 aaPredicted RBP11.49□□□□□ -0.57
LPIN1-207ENST00000425416 DESP17661 470 aa11.49□□□□□ -0.57
LPIN1-207ENST00000425416 MRE11P49959 708 aa11.49□□□□□ -0.57
LPIN1-207ENST00000425416 NGEFQ8N5V2 710 aa11.49□□□□□ -0.57
LPIN1-207ENST00000425416 RGL3Q3MIN7 710 aa11.48□□□□□ -0.57
LPIN1-207ENST00000425416 XBP1P17861 261 aa11.48□□□□□ -0.57
LPIN1-207ENST00000425416 TXLNAP40222 546 aa11.48□□□□□ -0.57
LPIN1-207ENST00000425416 CGNL1Q0VF96 1302 aa11.47□□□□□ -0.57
LPIN1-207ENST00000425416 ERICH2A1L162 156 aa11.47□□□□□ -0.57
LPIN1-207ENST00000425416 MEX3CQ5U5Q3 659 aaKnown RBP11.47□□□□□ -0.57
LPIN1-207ENST00000425416 GOLGA6L10A0A0M3HER8 536 aa11.47□□□□□ -0.57
LPIN1-207ENST00000425416 CPLX1O14810 134 aa11.47□□□□□ -0.57
LPIN1-207ENST00000425416 SYCP1Q15431 976 aa11.47□□□□□ -0.57
LPIN1-207ENST00000425416 HMGB1P1B2RPK0 211 aaPredicted RBP11.47□□□□□ -0.57
LPIN1-207ENST00000425416 AXDND1Q5T1B0 1012 aaPredicted RBP11.47□□□□□ -0.57
LPIN1-207ENST00000425416 BICD2Q8TD16 824 aa11.47□□□□□ -0.57
LPIN1-207ENST00000425416 ANKRD18BA2A2Z9 1011 aa11.46□□□□□ -0.57
LPIN1-207ENST00000425416 DDX11Q96FC9 970 aa11.46□□□□□ -0.57
LPIN1-207ENST00000425416 TRDNQ13061 729 aa11.46□□□□□ -0.57
LPIN1-207ENST00000425416 DACH1Q9UI36 760 aa11.46□□□□□ -0.57
LPIN1-207ENST00000425416 DNAI2Q9GZS0 605 aa11.46□□□□□ -0.58
LPIN1-207ENST00000425416 GBP3Q9H0R5 595 aa11.46□□□□□ -0.58
LPIN1-207ENST00000425416 FRAT2O75474 233 aaPredicted RBP11.46□□□□□ -0.58
LPIN1-207ENST00000425416 SRPK2P78362 688 aaKnown RBP11.45□□□□□ -0.58
LPIN1-207ENST00000425416 CHMP3Q9Y3E7 222 aa11.45□□□□□ -0.58
LPIN1-207ENST00000425416 TERF2IPQ9NYB0 399 aa11.45□□□□□ -0.58
LPIN1-207ENST00000425416 MAGEC2Q9UBF1 373 aaPredicted RBP11.45□□□□□ -0.58
LPIN1-207ENST00000425416 MCM3P25205 808 aa11.45□□□□□ -0.58
LPIN1-207ENST00000425416 MICALCLQ6ZW33 695 aa11.45□□□□□ -0.58
LPIN1-207ENST00000425416 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.45□□□□□ -0.58
LPIN1-207ENST00000425416 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
LPIN1-207ENST00000425416 V9GYY5 206 aaPredicted RBP11.45□□□□□ -0.58
LPIN1-207ENST00000425416 ZNHIT6Q9NWK9 470 aaKnown RBP11.45□□□□□ -0.58
LPIN1-207ENST00000425416 APBB1O00213 710 aa11.44□□□□□ -0.58
LPIN1-207ENST00000425416 CCDC112Q8NEF3 446 aa11.44□□□□□ -0.58
LPIN1-207ENST00000425416 MBD3O95983 291 aa11.44□□□□□ -0.58
LPIN1-207ENST00000425416 ENOX2Q16206 610 aaKnown RBP11.44□□□□□ -0.58
LPIN1-207ENST00000425416 MCTP1Q6DN14 999 aa11.44□□□□□ -0.58
LPIN1-207ENST00000425416 VPS8Q8N3P4 1428 aa11.44□□□□□ -0.58
LPIN1-207ENST00000425416 SETD5Q9C0A6 1442 aa11.43□□□□□ -0.58
LPIN1-207ENST00000425416 HSP90AB4PQ58FF6 505 aa11.43□□□□□ -0.58
LPIN1-207ENST00000425416 RAPGEF2Q9Y4G8 1499 aa11.43□□□□□ -0.58
LPIN1-207ENST00000425416 FANCIQ9NVI1 1328 aa11.43□□□□□ -0.58
LPIN1-207ENST00000425416 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
LPIN1-207ENST00000425416 ZFYVE27Q5T4F4 411 aa11.42□□□□□ -0.58
LPIN1-207ENST00000425416 UBE2Q2Q8WVN8 375 aa11.42□□□□□ -0.58
LPIN1-207ENST00000425416 CBFA2T2O43439 604 aa11.42□□□□□ -0.58
LPIN1-207ENST00000425416 WASHC2AQ641Q2 1341 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms