RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 TRPM2O94759 1503 aa26.8■■□□□ 1.88
IGHV3-47-201ENST00000425060 PLEKHG1Q9ULL1 1385 aa26.77■■□□□ 1.88
IGHV3-47-201ENST00000425060 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.77■■□□□ 1.88
IGHV3-47-201ENST00000425060 CLTCL1P53675 1640 aa26.76■■□□□ 1.87
IGHV3-47-201ENST00000425060 SLC26A8Q96RN1 970 aa26.75■■□□□ 1.87
IGHV3-47-201ENST00000425060 ACIN1Q9UKV3 1341 aaKnown RBP26.74■■□□□ 1.87
IGHV3-47-201ENST00000425060 MPHOSPH9Q99550 1183 aa26.74■■□□□ 1.87
IGHV3-47-201ENST00000425060 LRRC7Q96NW7 1537 aa26.73■■□□□ 1.87
IGHV3-47-201ENST00000425060 NUTM2DQ5VT03 806 aaPredicted RBP26.72■■□□□ 1.87
IGHV3-47-201ENST00000425060 PPP1R15AO75807 674 aaPredicted RBP26.71■■□□□ 1.87
IGHV3-47-201ENST00000425060 FOXD1Q16676 465 aa26.7■■□□□ 1.86
IGHV3-47-201ENST00000425060 RAB3GAP2Q9H2M9 1393 aa26.7■■□□□ 1.86
IGHV3-47-201ENST00000425060 UBAP1LF5GYI3 381 aa26.69■■□□□ 1.86
IGHV3-47-201ENST00000425060 KCNA6P17658 529 aa26.69■■□□□ 1.86
IGHV3-47-201ENST00000425060 BCANQ96GW7 911 aa26.68■■□□□ 1.86
IGHV3-47-201ENST00000425060 TBX22Q9Y458 520 aa26.68■■□□□ 1.86
IGHV3-47-201ENST00000425060 ADAMTS13Q76LX8 1427 aa26.67■■□□□ 1.86
IGHV3-47-201ENST00000425060 SENP3Q9H4L4 574 aaPredicted RBP26.67■■□□□ 1.86
IGHV3-47-201ENST00000425060 ZNF326Q5BKZ1 582 aaKnown RBP26.65■■□□□ 1.86
IGHV3-47-201ENST00000425060 KIF1BO60333 1816 aa26.65■■□□□ 1.86
IGHV3-47-201ENST00000425060 NWD1Q149M9 1564 aa26.63■■□□□ 1.85
IGHV3-47-201ENST00000425060 NEXMIFQ5QGS0 1516 aa26.62■■□□□ 1.85
IGHV3-47-201ENST00000425060 HRCP23327 699 aa26.62■■□□□ 1.85
IGHV3-47-201ENST00000425060 TOM1O60784 492 aa26.6■■□□□ 1.85
IGHV3-47-201ENST00000425060 ALKQ9UM73 1620 aa26.6■■□□□ 1.85
IGHV3-47-201ENST00000425060 DIP2AQ14689 1571 aa26.59■■□□□ 1.85
IGHV3-47-201ENST00000425060 CHD2O14647 1828 aaKnown RBP26.59■■□□□ 1.85
IGHV3-47-201ENST00000425060 XIRP1Q702N8 1843 aaKnown RBP26.59■■□□□ 1.85
IGHV3-47-201ENST00000425060 NRXN3Q9Y4C0 1643 aa26.57■■□□□ 1.84
IGHV3-47-201ENST00000425060 NKTRP30414 1462 aaKnown RBP26.57■■□□□ 1.84
IGHV3-47-201ENST00000425060 SETBP1Q9Y6X0 1596 aa26.57■■□□□ 1.84
IGHV3-47-201ENST00000425060 PIK3R4Q99570 1358 aa26.57■■□□□ 1.84
IGHV3-47-201ENST00000425060 RPGRIP1LQ68CZ1 1315 aa26.56■■□□□ 1.84
IGHV3-47-201ENST00000425060 TMEM94Q12767 1356 aa26.56■■□□□ 1.84
IGHV3-47-201ENST00000425060 CCDC144AA2RUR9 1427 aa26.56■■□□□ 1.84
IGHV3-47-201ENST00000425060 PROSER2Q86WR7 435 aaPredicted RBP26.55■■□□□ 1.84
IGHV3-47-201ENST00000425060 SPATA31E1Q6ZUB1 1445 aa26.53■■□□□ 1.84
IGHV3-47-201ENST00000425060 PTPRUQ92729 1446 aa26.51■■□□□ 1.83
IGHV3-47-201ENST00000425060 VGFO15240 615 aaPredicted RBP26.51■■□□□ 1.83
IGHV3-47-201ENST00000425060 RBM33Q96EV2 1170 aaKnown RBP26.5■■□□□ 1.83
IGHV3-47-201ENST00000425060 PIP4K2BP78356 416 aa26.49■■□□□ 1.83
IGHV3-47-201ENST00000425060 METP08581 1390 aa26.47■■□□□ 1.83
IGHV3-47-201ENST00000425060 AMOTL2Q9Y2J4 779 aa26.47■■□□□ 1.83
IGHV3-47-201ENST00000425060 PPLO60437 1756 aa26.47■■□□□ 1.83
IGHV3-47-201ENST00000425060 ANKRD30BQ9BXX2 1392 aa26.45■■□□□ 1.82
IGHV3-47-201ENST00000425060 SCAF1Q9H7N4 1312 aaKnown RBP26.44■■□□□ 1.82
IGHV3-47-201ENST00000425060 RGL3Q3MIN7 710 aa26.44■■□□□ 1.82
IGHV3-47-201ENST00000425060 NCOA3Q9Y6Q9 1424 aa26.44■■□□□ 1.82
IGHV3-47-201ENST00000425060 XRN1Q8IZH2 1706 aaKnown RBP26.42■■□□□ 1.82
IGHV3-47-201ENST00000425060 HSPA1LP34931 641 aa26.4■■□□□ 1.82
IGHV3-47-201ENST00000425060 ADGRF5Q8IZF2 1346 aa26.39■■□□□ 1.82
IGHV3-47-201ENST00000425060 SETD1AO15047 1707 aaKnown RBP26.39■■□□□ 1.82
IGHV3-47-201ENST00000425060 IFT172Q9UG01 1749 aa26.39■■□□□ 1.81
IGHV3-47-201ENST00000425060 MSH6P52701 1360 aa26.38■■□□□ 1.81
IGHV3-47-201ENST00000425060 FAM135BQ49AJ0 1406 aa26.35■■□□□ 1.81
IGHV3-47-201ENST00000425060 C19orf44Q9H6X5 657 aa26.33■■□□□ 1.81
IGHV3-47-201ENST00000425060 PRAG1Q86YV5 1406 aa26.31■■□□□ 1.8
IGHV3-47-201ENST00000425060 SLAIN2Q9P270 581 aa26.3■■□□□ 1.8
IGHV3-47-201ENST00000425060 PIK3C2GO75747 1445 aa26.3■■□□□ 1.8
IGHV3-47-201ENST00000425060 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.29■■□□□ 1.8
IGHV3-47-201ENST00000425060 NRXN1Q9ULB1 1477 aa26.29■■□□□ 1.8
IGHV3-47-201ENST00000425060 C14orf37Q86TY3 774 aa26.28■■□□□ 1.8
IGHV3-47-201ENST00000425060 MYOM2P54296 1465 aa26.26■■□□□ 1.79
IGHV3-47-201ENST00000425060 PTCH1Q13635 1447 aa26.26■■□□□ 1.79
IGHV3-47-201ENST00000425060 CADPS2Q86UW7 1296 aa26.26■■□□□ 1.79
IGHV3-47-201ENST00000425060 ROBO2Q9HCK4 1378 aa26.25■■□□□ 1.79
IGHV3-47-201ENST00000425060 ROBO1Q9Y6N7 1651 aa26.24■■□□□ 1.79
IGHV3-47-201ENST00000425060 DCCP43146 1447 aa26.23■■□□□ 1.79
IGHV3-47-201ENST00000425060 C14orf93Q9H972 538 aaKnown RBP26.23■■□□□ 1.79
IGHV3-47-201ENST00000425060 ATF3P18847 181 aa26.22■■□□□ 1.79
IGHV3-47-201ENST00000425060 ASXL1Q8IXJ9 1541 aa26.22■■□□□ 1.79
IGHV3-47-201ENST00000425060 ADGRL3Q9HAR2 1447 aa26.22■■□□□ 1.79
IGHV3-47-201ENST00000425060 TMEM132EQ6IEE7 984 aa26.19■■□□□ 1.78
IGHV3-47-201ENST00000425060 TECPR2O15040 1411 aa26.19■■□□□ 1.78
IGHV3-47-201ENST00000425060 LRPPRCP42704 1394 aaKnown RBP26.19■■□□□ 1.78
IGHV3-47-201ENST00000425060 DHX57Q6P158 1386 aaKnown RBP26.19■■□□□ 1.78
IGHV3-47-201ENST00000425060 CFAP70Q5T0N1 1121 aa26.18■■□□□ 1.78
IGHV3-47-201ENST00000425060 ABCC11Q96J66 1382 aa26.18■■□□□ 1.78
IGHV3-47-201ENST00000425060 NALCNQ8IZF0 1738 aa26.17■■□□□ 1.78
IGHV3-47-201ENST00000425060 TRIM26Q12899 539 aaPredicted RBP26.16■■□□□ 1.78
IGHV3-47-201ENST00000425060 STAC3Q96MF2 364 aa26.16■■□□□ 1.78
IGHV3-47-201ENST00000425060 MST1RQ04912 1400 aa26.15■■□□□ 1.78
IGHV3-47-201ENST00000425060 DCAF11Q8TEB1 546 aa26.15■■□□□ 1.78
IGHV3-47-201ENST00000425060 YTHDC2Q9H6S0 1430 aaKnown RBP26.14■■□□□ 1.77
IGHV3-47-201ENST00000425060 STK26Q9P289 416 aa26.13■■□□□ 1.77
IGHV3-47-201ENST00000425060 KDM2AQ9Y2K7 1162 aa26.13■■□□□ 1.77
IGHV3-47-201ENST00000425060 DISP3Q9P2K9 1392 aa26.12■■□□□ 1.77
IGHV3-47-201ENST00000425060 LAMC1P11047 1609 aa26.12■■□□□ 1.77
IGHV3-47-201ENST00000425060 KNDC1Q76NI1 1749 aa26.11■■□□□ 1.77
IGHV3-47-201ENST00000425060 BRINP3Q76B58 766 aa26.11■■□□□ 1.77
IGHV3-47-201ENST00000425060 SIRT1Q96EB6 747 aa26.11■■□□□ 1.77
IGHV3-47-201ENST00000425060 WAPLQ7Z5K2 1190 aa26.09■■□□□ 1.77
IGHV3-47-201ENST00000425060 PLEKHH1Q9ULM0 1364 aa26.07■■□□□ 1.76
IGHV3-47-201ENST00000425060 ADGRB1O14514 1584 aa26.07■■□□□ 1.76
IGHV3-47-201ENST00000425060 MED1Q15648 1581 aaPredicted RBP26.06■■□□□ 1.76
IGHV3-47-201ENST00000425060 AHDC1Q5TGY3 1603 aaPredicted RBP26.06■■□□□ 1.76
IGHV3-47-201ENST00000425060 PHLPP1O60346 1717 aa26.05■■□□□ 1.76
IGHV3-47-201ENST00000425060 C1orf167Q5SNV9 1468 aa26.04■■□□□ 1.76
IGHV3-47-201ENST00000425060 COL16A1Q07092 1604 aaPredicted RBP26.04■■□□□ 1.76
IGHV3-47-201ENST00000425060 CDC42BPGQ6DT37 1551 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms