RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 MYOM2P54296 1465 aa20.19■□□□□ 0.82
ACTN4-203ENST00000424234 SETD1AO15047 1707 aaKnown RBP20.17■□□□□ 0.82
ACTN4-203ENST00000424234 NRXN3Q9Y4C0 1643 aa20.17■□□□□ 0.82
ACTN4-203ENST00000424234 STAG3Q9UJ98 1225 aa20.17■□□□□ 0.82
ACTN4-203ENST00000424234 STRCQ7RTU9 1775 aa20.16■□□□□ 0.82
ACTN4-203ENST00000424234 KIAA1210Q9ULL0 1709 aa20.16■□□□□ 0.82
ACTN4-203ENST00000424234 RIMS2Q9UQ26 1411 aa20.16■□□□□ 0.82
ACTN4-203ENST00000424234 RGL3Q3MIN7 710 aa20.16■□□□□ 0.82
ACTN4-203ENST00000424234 TRPM1Q7Z4N2 1603 aa20.15■□□□□ 0.82
ACTN4-203ENST00000424234 TMEM2Q9UHN6 1383 aa20.15■□□□□ 0.82
ACTN4-203ENST00000424234 LAMC1P11047 1609 aa20.14■□□□□ 0.81
ACTN4-203ENST00000424234 ZNF326Q5BKZ1 582 aaKnown RBP20.13■□□□□ 0.81
ACTN4-203ENST00000424234 L3MBTL2Q969R5 705 aa20.13■□□□□ 0.81
ACTN4-203ENST00000424234 NRXN1Q9ULB1 1477 aa20.13■□□□□ 0.81
ACTN4-203ENST00000424234 SCAF11Q99590 1463 aaKnown RBP20.11■□□□□ 0.81
ACTN4-203ENST00000424234 SETBP1Q9Y6X0 1596 aa20.11■□□□□ 0.81
ACTN4-203ENST00000424234 RPGRIP1LQ68CZ1 1315 aa20.11■□□□□ 0.81
ACTN4-203ENST00000424234 THEMISQ8N1K5 641 aaPredicted RBP20.1■□□□□ 0.81
ACTN4-203ENST00000424234 TIMELESSQ9UNS1 1208 aa20.09■□□□□ 0.81
ACTN4-203ENST00000424234 PIK3C2GO75747 1445 aa20.09■□□□□ 0.81
ACTN4-203ENST00000424234 PRAG1Q86YV5 1406 aa20.09■□□□□ 0.81
ACTN4-203ENST00000424234 DCAF11Q8TEB1 546 aa20.08■□□□□ 0.8
ACTN4-203ENST00000424234 CENPBP07199 599 aaPredicted RBP20.06■□□□□ 0.8
ACTN4-203ENST00000424234 DIP2AQ14689 1571 aa20.05■□□□□ 0.8
ACTN4-203ENST00000424234 NUTM2DQ5VT03 806 aaPredicted RBP20.04■□□□□ 0.8
ACTN4-203ENST00000424234 ADGRF5Q8IZF2 1346 aa20.04■□□□□ 0.8
ACTN4-203ENST00000424234 ALKQ9UM73 1620 aa20.04■□□□□ 0.8
ACTN4-203ENST00000424234 KDM2AQ9Y2K7 1162 aa20.04■□□□□ 0.8
ACTN4-203ENST00000424234 MED14O60244 1454 aa20.03■□□□□ 0.8
ACTN4-203ENST00000424234 LTKP29376 864 aa20.03■□□□□ 0.8
ACTN4-203ENST00000424234 HSPA2P54652 639 aa20.03■□□□□ 0.8
ACTN4-203ENST00000424234 PLEKHG1Q9ULL1 1385 aa20.03■□□□□ 0.8
ACTN4-203ENST00000424234 ASXL1Q8IXJ9 1541 aa20.03■□□□□ 0.8
ACTN4-203ENST00000424234 RALGAPBQ86X10 1494 aa20.02■□□□□ 0.8
ACTN4-203ENST00000424234 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.02■□□□□ 0.8
ACTN4-203ENST00000424234 STAC3Q96MF2 364 aa20.01■□□□□ 0.79
ACTN4-203ENST00000424234 VGFO15240 615 aaPredicted RBP20■□□□□ 0.79
ACTN4-203ENST00000424234 PPP1R15AO75807 674 aaPredicted RBP20■□□□□ 0.79
ACTN4-203ENST00000424234 CHD2O14647 1828 aaKnown RBP20■□□□□ 0.79
ACTN4-203ENST00000424234 KNDC1Q76NI1 1749 aa20■□□□□ 0.79
ACTN4-203ENST00000424234 TXNDC2Q86VQ3 553 aa20■□□□□ 0.79
ACTN4-203ENST00000424234 EID1Q9Y6B2 187 aa20■□□□□ 0.79
ACTN4-203ENST00000424234 ADAMTS13Q76LX8 1427 aa19.98■□□□□ 0.79
ACTN4-203ENST00000424234 ADGRB1O14514 1584 aa19.98■□□□□ 0.79
ACTN4-203ENST00000424234 HDGFP51858 240 aaKnown RBP19.98■□□□□ 0.79
ACTN4-203ENST00000424234 NBPF8Q3BBV2 869 aa19.98■□□□□ 0.79
ACTN4-203ENST00000424234 NPHP4O75161 1426 aaPredicted RBP19.98■□□□□ 0.79
ACTN4-203ENST00000424234 SCAF1Q9H7N4 1312 aaKnown RBP19.97■□□□□ 0.79
ACTN4-203ENST00000424234 ARHGEF28Q8N1W1 1705 aaKnown RBP19.97■□□□□ 0.79
ACTN4-203ENST00000424234 ANKLE2Q86XL3 938 aa19.97■□□□□ 0.79
ACTN4-203ENST00000424234 MIER1Q8N108 512 aa19.97■□□□□ 0.79
ACTN4-203ENST00000424234 XRN1Q8IZH2 1706 aaKnown RBP19.95■□□□□ 0.78
ACTN4-203ENST00000424234 NCKAP5LQ9HCH0 1330 aa19.94■□□□□ 0.78
ACTN4-203ENST00000424234 STRCP1A6NGW2 1772 aa19.94■□□□□ 0.78
ACTN4-203ENST00000424234 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
ACTN4-203ENST00000424234 SENP3Q9H4L4 574 aaPredicted RBP19.94■□□□□ 0.78
ACTN4-203ENST00000424234 NWD1Q149M9 1564 aa19.92■□□□□ 0.78
ACTN4-203ENST00000424234 GPRASP1Q5JY77 1395 aa19.9■□□□□ 0.78
ACTN4-203ENST00000424234 CFAP70Q5T0N1 1121 aa19.9■□□□□ 0.78
ACTN4-203ENST00000424234 C14orf93Q9H972 538 aaKnown RBP19.89■□□□□ 0.77
ACTN4-203ENST00000424234 CPS1P31327 1500 aa19.88■□□□□ 0.77
ACTN4-203ENST00000424234 ROCK2O75116 1388 aaKnown RBP19.88■□□□□ 0.77
ACTN4-203ENST00000424234 QRICH2Q9H0J4 1663 aa19.87■□□□□ 0.77
ACTN4-203ENST00000424234 METP08581 1390 aa19.87■□□□□ 0.77
ACTN4-203ENST00000424234 NBPF1Q3BBV0 1214 aa19.86■□□□□ 0.77
ACTN4-203ENST00000424234 BCANQ96GW7 911 aa19.86■□□□□ 0.77
ACTN4-203ENST00000424234 SLC26A8Q96RN1 970 aa19.86■□□□□ 0.77
ACTN4-203ENST00000424234 XIRP1Q702N8 1843 aaKnown RBP19.84■□□□□ 0.77
ACTN4-203ENST00000424234 PTPRUQ92729 1446 aa19.84■□□□□ 0.77
ACTN4-203ENST00000424234 YTHDC2Q9H6S0 1430 aaKnown RBP19.84■□□□□ 0.77
ACTN4-203ENST00000424234 DLC1Q96QB1 1528 aa19.84■□□□□ 0.77
ACTN4-203ENST00000424234 TBX22Q9Y458 520 aa19.83■□□□□ 0.77
ACTN4-203ENST00000424234 PIK3R4Q99570 1358 aa19.82■□□□□ 0.76
ACTN4-203ENST00000424234 TECPR2O15040 1411 aa19.82■□□□□ 0.76
ACTN4-203ENST00000424234 TMEM132EQ6IEE7 984 aa19.81■□□□□ 0.76
ACTN4-203ENST00000424234 LRPPRCP42704 1394 aaKnown RBP19.8■□□□□ 0.76
ACTN4-203ENST00000424234 NALCNQ8IZF0 1738 aa19.79■□□□□ 0.76
ACTN4-203ENST00000424234 PTCH1Q13635 1447 aa19.78■□□□□ 0.76
ACTN4-203ENST00000424234 CARD11Q9BXL7 1154 aa19.78■□□□□ 0.76
ACTN4-203ENST00000424234 NKTRP30414 1462 aaKnown RBP19.78■□□□□ 0.76
ACTN4-203ENST00000424234 USP47Q96K76 1375 aa19.77■□□□□ 0.76
ACTN4-203ENST00000424234 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.76■□□□□ 0.75
ACTN4-203ENST00000424234 ABCC11Q96J66 1382 aa19.76■□□□□ 0.75
ACTN4-203ENST00000424234 YTHDC1Q96MU7 727 aaKnown RBP19.74■□□□□ 0.75
ACTN4-203ENST00000424234 DMRT2Q9Y5R5 561 aa19.74■□□□□ 0.75
ACTN4-203ENST00000424234 EIF3AQ14152 1382 aaKnown RBP19.73■□□□□ 0.75
ACTN4-203ENST00000424234 ADGRB2O60241 1585 aa19.73■□□□□ 0.75
ACTN4-203ENST00000424234 FAM135BQ49AJ0 1406 aa19.72■□□□□ 0.75
ACTN4-203ENST00000424234 TRAK1Q9UPV9 953 aa19.72■□□□□ 0.75
ACTN4-203ENST00000424234 ROBO2Q9HCK4 1378 aa19.72■□□□□ 0.75
ACTN4-203ENST00000424234 STK26Q9P289 416 aa19.71■□□□□ 0.75
ACTN4-203ENST00000424234 AMOTL2Q9Y2J4 779 aa19.7■□□□□ 0.74
ACTN4-203ENST00000424234 LTBP4Q8N2S1 1624 aa19.7■□□□□ 0.74
ACTN4-203ENST00000424234 KCNA6P17658 529 aa19.7■□□□□ 0.74
ACTN4-203ENST00000424234 GTF3C3Q9Y5Q9 886 aa19.7■□□□□ 0.74
ACTN4-203ENST00000424234 PLEKHH1Q9ULM0 1364 aa19.69■□□□□ 0.74
ACTN4-203ENST00000424234 ZNF335Q9H4Z2 1342 aaPredicted RBP19.68■□□□□ 0.74
ACTN4-203ENST00000424234 RGPD8O14715 1765 aaPredicted RBP19.67■□□□□ 0.74
ACTN4-203ENST00000424234 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.74
ACTN4-203ENST00000424234 FMN2Q9NZ56 1722 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms