RNA–Protein interactions for RNA: ENST00000423611.5

ACAA1-206, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 3

Gene ACAA1, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-206ENST00000423611 RIMS2Q9UQ26 1411 aa30.05■■■□□ 2.4
ACAA1-206ENST00000423611 KIF1BO60333 1816 aa30.03■■■□□ 2.4
ACAA1-206ENST00000423611 RAB3GAP2Q9H2M9 1393 aa30.01■■■□□ 2.39
ACAA1-206ENST00000423611 PLEKHG1Q9ULL1 1385 aa29.99■■■□□ 2.39
ACAA1-206ENST00000423611 HDGFP51858 240 aaKnown RBP29.96■■■□□ 2.39
ACAA1-206ENST00000423611 MPHOSPH9Q99550 1183 aa29.96■■■□□ 2.39
ACAA1-206ENST00000423611 CHGAP10645 457 aaKnown RBP29.94■■■□□ 2.38
ACAA1-206ENST00000423611 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.94■■■□□ 2.38
ACAA1-206ENST00000423611 HRCP23327 699 aa29.93■■■□□ 2.38
ACAA1-206ENST00000423611 NEXMIFQ5QGS0 1516 aa29.92■■■□□ 2.38
ACAA1-206ENST00000423611 NWD1Q149M9 1564 aa29.91■■■□□ 2.38
ACAA1-206ENST00000423611 DIP2AQ14689 1571 aa29.9■■■□□ 2.38
ACAA1-206ENST00000423611 LRRC7Q96NW7 1537 aa29.9■■■□□ 2.38
ACAA1-206ENST00000423611 CHD2O14647 1828 aaKnown RBP29.89■■■□□ 2.38
ACAA1-206ENST00000423611 NRXN3Q9Y4C0 1643 aa29.89■■■□□ 2.37
ACAA1-206ENST00000423611 XIRP1Q702N8 1843 aaKnown RBP29.88■■■□□ 2.37
ACAA1-206ENST00000423611 ADAMTS13Q76LX8 1427 aa29.88■■■□□ 2.37
ACAA1-206ENST00000423611 FOXD1Q16676 465 aa29.87■■■□□ 2.37
ACAA1-206ENST00000423611 SETBP1Q9Y6X0 1596 aa29.86■■■□□ 2.37
ACAA1-206ENST00000423611 SLC26A8Q96RN1 970 aa29.85■■■□□ 2.37
ACAA1-206ENST00000423611 PPP1R15AO75807 674 aaPredicted RBP29.84■■■□□ 2.37
ACAA1-206ENST00000423611 PPLO60437 1756 aa29.83■■■□□ 2.37
ACAA1-206ENST00000423611 CCDC144AA2RUR9 1427 aa29.82■■■□□ 2.36
ACAA1-206ENST00000423611 TBX22Q9Y458 520 aa29.82■■■□□ 2.36
ACAA1-206ENST00000423611 NKTRP30414 1462 aaKnown RBP29.81■■■□□ 2.36
ACAA1-206ENST00000423611 KCNA6P17658 529 aa29.81■■■□□ 2.36
ACAA1-206ENST00000423611 NUTM2DQ5VT03 806 aaPredicted RBP29.8■■■□□ 2.36
ACAA1-206ENST00000423611 SPATA31E1Q6ZUB1 1445 aa29.79■■■□□ 2.36
ACAA1-206ENST00000423611 ALKQ9UM73 1620 aa29.79■■■□□ 2.36
ACAA1-206ENST00000423611 IFT172Q9UG01 1749 aa29.79■■■□□ 2.36
ACAA1-206ENST00000423611 ZNF326Q5BKZ1 582 aaKnown RBP29.78■■■□□ 2.36
ACAA1-206ENST00000423611 PIK3R4Q99570 1358 aa29.77■■■□□ 2.36
ACAA1-206ENST00000423611 RPGRIP1LQ68CZ1 1315 aa29.76■■■□□ 2.36
ACAA1-206ENST00000423611 SETD1AO15047 1707 aaKnown RBP29.74■■■□□ 2.35
ACAA1-206ENST00000423611 BCANQ96GW7 911 aa29.74■■■□□ 2.35
ACAA1-206ENST00000423611 XRN1Q8IZH2 1706 aaKnown RBP29.71■■■□□ 2.35
ACAA1-206ENST00000423611 ANKRD30BQ9BXX2 1392 aa29.7■■■□□ 2.35
ACAA1-206ENST00000423611 UBAP1LF5GYI3 381 aa29.7■■■□□ 2.35
ACAA1-206ENST00000423611 SENP3Q9H4L4 574 aaPredicted RBP29.68■■■□□ 2.34
ACAA1-206ENST00000423611 VGFO15240 615 aaPredicted RBP29.67■■■□□ 2.34
ACAA1-206ENST00000423611 PTPRUQ92729 1446 aa29.67■■■□□ 2.34
ACAA1-206ENST00000423611 TMEM94Q12767 1356 aa29.66■■■□□ 2.34
ACAA1-206ENST00000423611 TOM1O60784 492 aa29.63■■■□□ 2.33
ACAA1-206ENST00000423611 NCOA3Q9Y6Q9 1424 aa29.62■■■□□ 2.33
ACAA1-206ENST00000423611 METP08581 1390 aa29.62■■■□□ 2.33
ACAA1-206ENST00000423611 PROSER2Q86WR7 435 aaPredicted RBP29.61■■■□□ 2.33
ACAA1-206ENST00000423611 PRAG1Q86YV5 1406 aa29.57■■■□□ 2.32
ACAA1-206ENST00000423611 NRXN1Q9ULB1 1477 aa29.56■■■□□ 2.32
ACAA1-206ENST00000423611 RGL3Q3MIN7 710 aa29.56■■■□□ 2.32
ACAA1-206ENST00000423611 AMOTL2Q9Y2J4 779 aa29.56■■■□□ 2.32
ACAA1-206ENST00000423611 MYOM2P54296 1465 aa29.55■■■□□ 2.32
ACAA1-206ENST00000423611 ADGRF5Q8IZF2 1346 aa29.54■■■□□ 2.32
ACAA1-206ENST00000423611 PIK3C2GO75747 1445 aa29.54■■■□□ 2.32
ACAA1-206ENST00000423611 RBM33Q96EV2 1170 aaKnown RBP29.51■■■□□ 2.31
ACAA1-206ENST00000423611 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.51■■■□□ 2.31
ACAA1-206ENST00000423611 MSH6P52701 1360 aa29.49■■■□□ 2.31
ACAA1-206ENST00000423611 PTCH1Q13635 1447 aa29.48■■■□□ 2.31
ACAA1-206ENST00000423611 LAMC1P11047 1609 aa29.47■■■□□ 2.31
ACAA1-206ENST00000423611 ASXL1Q8IXJ9 1541 aa29.46■■■□□ 2.31
ACAA1-206ENST00000423611 PIP4K2BP78356 416 aa29.46■■■□□ 2.31
ACAA1-206ENST00000423611 TRIM26Q12899 539 aaPredicted RBP29.46■■■□□ 2.31
ACAA1-206ENST00000423611 FAM135BQ49AJ0 1406 aa29.45■■■□□ 2.3
ACAA1-206ENST00000423611 KNDC1Q76NI1 1749 aa29.44■■■□□ 2.3
ACAA1-206ENST00000423611 NALCNQ8IZF0 1738 aa29.42■■■□□ 2.3
ACAA1-206ENST00000423611 DCCP43146 1447 aa29.42■■■□□ 2.3
ACAA1-206ENST00000423611 ROBO1Q9Y6N7 1651 aa29.41■■■□□ 2.3
ACAA1-206ENST00000423611 TECPR2O15040 1411 aa29.4■■■□□ 2.3
ACAA1-206ENST00000423611 C19orf44Q9H6X5 657 aa29.4■■■□□ 2.3
ACAA1-206ENST00000423611 SCAF1Q9H7N4 1312 aaKnown RBP29.4■■■□□ 2.3
ACAA1-206ENST00000423611 DHX57Q6P158 1386 aaKnown RBP29.39■■■□□ 2.3
ACAA1-206ENST00000423611 ROBO2Q9HCK4 1378 aa29.39■■■□□ 2.29
ACAA1-206ENST00000423611 ADGRL3Q9HAR2 1447 aa29.38■■■□□ 2.29
ACAA1-206ENST00000423611 HSPA1LP34931 641 aa29.38■■■□□ 2.29
ACAA1-206ENST00000423611 STAC3Q96MF2 364 aa29.37■■■□□ 2.29
ACAA1-206ENST00000423611 C14orf93Q9H972 538 aaKnown RBP29.37■■■□□ 2.29
ACAA1-206ENST00000423611 LRPPRCP42704 1394 aaKnown RBP29.35■■■□□ 2.29
ACAA1-206ENST00000423611 CADPS2Q86UW7 1296 aa29.33■■■□□ 2.29
ACAA1-206ENST00000423611 SLAIN2Q9P270 581 aa29.33■■■□□ 2.29
ACAA1-206ENST00000423611 ABCC11Q96J66 1382 aa29.33■■■□□ 2.29
ACAA1-206ENST00000423611 C14orf37Q86TY3 774 aa29.31■■■□□ 2.28
ACAA1-206ENST00000423611 ADGRB1O14514 1584 aa29.3■■■□□ 2.28
ACAA1-206ENST00000423611 YTHDC2Q9H6S0 1430 aaKnown RBP29.3■■■□□ 2.28
ACAA1-206ENST00000423611 ATF3P18847 181 aa29.28■■■□□ 2.28
ACAA1-206ENST00000423611 CFAP70Q5T0N1 1121 aa29.28■■■□□ 2.28
ACAA1-206ENST00000423611 DCAF11Q8TEB1 546 aa29.28■■■□□ 2.28
ACAA1-206ENST00000423611 MST1RQ04912 1400 aa29.28■■■□□ 2.28
ACAA1-206ENST00000423611 TMEM132EQ6IEE7 984 aa29.27■■■□□ 2.28
ACAA1-206ENST00000423611 KIAA1210Q9ULL0 1709 aa29.25■■■□□ 2.27
ACAA1-206ENST00000423611 CDC42BPGQ6DT37 1551 aa29.24■■■□□ 2.27
ACAA1-206ENST00000423611 SIRT1Q96EB6 747 aa29.24■■■□□ 2.27
ACAA1-206ENST00000423611 DLC1Q96QB1 1528 aa29.23■■■□□ 2.27
ACAA1-206ENST00000423611 AHDC1Q5TGY3 1603 aaPredicted RBP29.23■■■□□ 2.27
ACAA1-206ENST00000423611 PHLPP1O60346 1717 aa29.21■■■□□ 2.27
ACAA1-206ENST00000423611 KDM2AQ9Y2K7 1162 aa29.21■■■□□ 2.27
ACAA1-206ENST00000423611 COL16A1Q07092 1604 aaPredicted RBP29.2■■■□□ 2.26
ACAA1-206ENST00000423611 STK26Q9P289 416 aa29.18■■■□□ 2.26
ACAA1-206ENST00000423611 NHSL1Q5SYE7 1610 aa29.18■■■□□ 2.26
ACAA1-206ENST00000423611 PLEKHH1Q9ULM0 1364 aa29.17■■■□□ 2.26
ACAA1-206ENST00000423611 BRINP3Q76B58 766 aa29.15■■■□□ 2.26
ACAA1-206ENST00000423611 WAPLQ7Z5K2 1190 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms