RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 NLRP13Q86W25 1043 aa18.67■□□□□ 0.58
CDCA3-202ENST00000422785 ABCC3O15438 1527 aa18.67■□□□□ 0.58
CDCA3-202ENST00000422785 ADGRB3O60242 1522 aa18.67■□□□□ 0.58
CDCA3-202ENST00000422785 GLI2P10070 1586 aa18.66■□□□□ 0.58
CDCA3-202ENST00000422785 NRXN1Q9ULB1 1477 aa18.66■□□□□ 0.58
CDCA3-202ENST00000422785 CDCA8Q53HL2 280 aa18.66■□□□□ 0.58
CDCA3-202ENST00000422785 RICTORQ6R327 1708 aa18.66■□□□□ 0.58
CDCA3-202ENST00000422785 DIP2CQ9Y2E4 1556 aa18.66■□□□□ 0.58
CDCA3-202ENST00000422785 ADGRF5Q8IZF2 1346 aa18.65■□□□□ 0.58
CDCA3-202ENST00000422785 ERICH6BQ5W0A0 696 aa18.64■□□□□ 0.57
CDCA3-202ENST00000422785 CYB5RLQ6IPT4 315 aa18.64■□□□□ 0.57
CDCA3-202ENST00000422785 SMG6Q86US8 1419 aaKnown RBP18.64■□□□□ 0.57
CDCA3-202ENST00000422785 CFAP70Q5T0N1 1121 aa18.63■□□□□ 0.57
CDCA3-202ENST00000422785 CAMSAP1Q5T5Y3 1602 aa18.62■□□□□ 0.57
CDCA3-202ENST00000422785 SLC24A1O60721 1099 aa18.61■□□□□ 0.57
CDCA3-202ENST00000422785 SYNMO15061 1565 aa18.61■□□□□ 0.57
CDCA3-202ENST00000422785 CC2D1BQ5T0F9 858 aaKnown RBP18.6■□□□□ 0.57
CDCA3-202ENST00000422785 RIMBP3CA6NJZ7 1639 aa18.6■□□□□ 0.57
CDCA3-202ENST00000422785 RIMBP3BA6NNM3 1639 aa18.6■□□□□ 0.57
CDCA3-202ENST00000422785 RIMBP3Q9UFD9 1639 aa18.6■□□□□ 0.57
CDCA3-202ENST00000422785 NOS1P29475 1434 aa18.59■□□□□ 0.57
CDCA3-202ENST00000422785 CFAP65Q6ZU64 1925 aaKnown RBP18.59■□□□□ 0.57
CDCA3-202ENST00000422785 PPLO60437 1756 aa18.58■□□□□ 0.57
CDCA3-202ENST00000422785 NUDCQ9Y266 331 aa18.58■□□□□ 0.56
CDCA3-202ENST00000422785 SETBP1Q9Y6X0 1596 aa18.58■□□□□ 0.56
CDCA3-202ENST00000422785 RPGRIP1LQ68CZ1 1315 aa18.58■□□□□ 0.56
CDCA3-202ENST00000422785 CHGAP10645 457 aaKnown RBP18.57■□□□□ 0.56
CDCA3-202ENST00000422785 IRX6P78412 446 aaPredicted RBP18.57■□□□□ 0.56
CDCA3-202ENST00000422785 TSHZ2Q9NRE2 1034 aa18.57■□□□□ 0.56
CDCA3-202ENST00000422785 ZC3H13Q5T200 1668 aaKnown RBP18.57■□□□□ 0.56
CDCA3-202ENST00000422785 ARHGAP31Q2M1Z3 1444 aa18.57■□□□□ 0.56
CDCA3-202ENST00000422785 KDM5AP29375 1690 aaKnown RBP18.56■□□□□ 0.56
CDCA3-202ENST00000422785 SIGLEC1Q9BZZ2 1709 aa18.56■□□□□ 0.56
CDCA3-202ENST00000422785 KNSTRNQ9Y448 316 aa18.56■□□□□ 0.56
CDCA3-202ENST00000422785 MYOM1P52179 1685 aa18.56■□□□□ 0.56
CDCA3-202ENST00000422785 YEATS2Q9ULM3 1422 aa18.56■□□□□ 0.56
CDCA3-202ENST00000422785 MYO3AQ8NEV4 1616 aa18.55■□□□□ 0.56
CDCA3-202ENST00000422785 INSRP06213 1382 aa18.55■□□□□ 0.56
CDCA3-202ENST00000422785 PIK3C2GO75747 1445 aa18.55■□□□□ 0.56
CDCA3-202ENST00000422785 PIK3C2BO00750 1634 aa18.55■□□□□ 0.56
CDCA3-202ENST00000422785 ZMYM4Q5VZL5 1548 aa18.54■□□□□ 0.56
CDCA3-202ENST00000422785 ERVK-7P63135 1459 aa18.54■□□□□ 0.56
CDCA3-202ENST00000422785 DIP2BQ9P265 1576 aa18.53■□□□□ 0.56
CDCA3-202ENST00000422785 SBNO2Q9Y2G9 1366 aa18.53■□□□□ 0.56
CDCA3-202ENST00000422785 C14orf93Q9H972 538 aaKnown RBP18.53■□□□□ 0.56
CDCA3-202ENST00000422785 AMER1Q5JTC6 1135 aaPredicted RBP18.52■□□□□ 0.56
CDCA3-202ENST00000422785 FAM69CQ0P6D2 419 aa18.52■□□□□ 0.55
CDCA3-202ENST00000422785 ASXL1Q8IXJ9 1541 aa18.52■□□□□ 0.55
CDCA3-202ENST00000422785 NPC1L1Q9UHC9 1359 aa18.51■□□□□ 0.55
CDCA3-202ENST00000422785 PPP4R2Q9NY27 417 aa18.51■□□□□ 0.55
CDCA3-202ENST00000422785 RNF123Q5XPI4 1314 aa18.49■□□□□ 0.55
CDCA3-202ENST00000422785 ADGRB1O14514 1584 aa18.49■□□□□ 0.55
CDCA3-202ENST00000422785 BLMP54132 1417 aaPredicted RBP18.48■□□□□ 0.55
CDCA3-202ENST00000422785 CENPJQ9HC77 1338 aaPredicted RBP18.48■□□□□ 0.55
CDCA3-202ENST00000422785 SENP3-EIF4A1A0A087X0R7 540 aa18.47■□□□□ 0.55
CDCA3-202ENST00000422785 PPP2R1AP30153 589 aa18.47■□□□□ 0.55
CDCA3-202ENST00000422785 NEXMIFQ5QGS0 1516 aa18.47■□□□□ 0.55
CDCA3-202ENST00000422785 VGFO15240 615 aaPredicted RBP18.46■□□□□ 0.55
CDCA3-202ENST00000422785 SLC52A1Q9NWF4 448 aa18.46■□□□□ 0.55
CDCA3-202ENST00000422785 PDE3BQ13370 1112 aa18.46■□□□□ 0.55
CDCA3-202ENST00000422785 IDI1Q13907 227 aa18.44■□□□□ 0.54
CDCA3-202ENST00000422785 PREX1Q8TCU6 1659 aa18.43■□□□□ 0.54
CDCA3-202ENST00000422785 TRAK1Q9UPV9 953 aa18.43■□□□□ 0.54
CDCA3-202ENST00000422785 BCL11AQ9H165 835 aa18.43■□□□□ 0.54
CDCA3-202ENST00000422785 QRICH2Q9H0J4 1663 aa18.43■□□□□ 0.54
CDCA3-202ENST00000422785 REREQ9P2R6 1566 aa18.43■□□□□ 0.54
CDCA3-202ENST00000422785 ZFYVE9O95405 1425 aa18.43■□□□□ 0.54
CDCA3-202ENST00000422785 TSPOAP1O95153 1857 aa18.42■□□□□ 0.54
CDCA3-202ENST00000422785 TMEM132EQ6IEE7 984 aa18.42■□□□□ 0.54
CDCA3-202ENST00000422785 AGLP35573 1532 aa18.4■□□□□ 0.54
CDCA3-202ENST00000422785 CARD14Q9BXL6 1004 aa18.39■□□□□ 0.53
CDCA3-202ENST00000422785 TMEM131LA2VDJ0 1609 aa18.39■□□□□ 0.53
CDCA3-202ENST00000422785 ADAMTS8Q9UP79 889 aa18.38■□□□□ 0.53
CDCA3-202ENST00000422785 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
CDCA3-202ENST00000422785 SALL2Q9Y467 1007 aaPredicted RBP18.38■□□□□ 0.53
CDCA3-202ENST00000422785 NUTM2DQ5VT03 806 aaPredicted RBP18.37■□□□□ 0.53
CDCA3-202ENST00000422785 WDR43Q15061 677 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDCA3-202ENST00000422785 ARHGEF28Q8N1W1 1705 aaKnown RBP18.36■□□□□ 0.53
CDCA3-202ENST00000422785 MYO5BQ9ULV0 1848 aa18.36■□□□□ 0.53
CDCA3-202ENST00000422785 PUS7Q96PZ0 661 aaKnown RBP18.36■□□□□ 0.53
CDCA3-202ENST00000422785 B4GALNT3Q6L9W6 998 aa18.34■□□□□ 0.53
CDCA3-202ENST00000422785 RCAN3Q9UKA8 241 aa18.33■□□□□ 0.53
CDCA3-202ENST00000422785 FBXO31Q5XUX0 539 aaPredicted RBP18.32■□□□□ 0.52
CDCA3-202ENST00000422785 CDCA7LQ96GN5 454 aa18.31■□□□□ 0.52
CDCA3-202ENST00000422785 EVC2Q86UK5 1308 aa18.31■□□□□ 0.52
CDCA3-202ENST00000422785 RRP1P56182 461 aaKnown RBP18.3■□□□□ 0.52
CDCA3-202ENST00000422785 SLC12A5Q9H2X9 1139 aa18.3■□□□□ 0.52
CDCA3-202ENST00000422785 NSD3Q9BZ95 1437 aa18.3■□□□□ 0.52
CDCA3-202ENST00000422785 TULP4Q9NRJ4 1543 aa18.3■□□□□ 0.52
CDCA3-202ENST00000422785 USP32Q8NFA0 1604 aa18.29■□□□□ 0.52
CDCA3-202ENST00000422785 RBM19Q9Y4C8 960 aaKnown RBP18.29■□□□□ 0.52
CDCA3-202ENST00000422785 CLTCQ00610 1675 aaKnown RBP18.29■□□□□ 0.52
CDCA3-202ENST00000422785 KIF13AQ9H1H9 1805 aa18.29■□□□□ 0.52
CDCA3-202ENST00000422785 ARHGEF40Q8TER5 1519 aa18.27■□□□□ 0.52
CDCA3-202ENST00000422785 SPATA31D1Q6ZQQ2 1576 aa18.27■□□□□ 0.51
CDCA3-202ENST00000422785 POLR3AO14802 1390 aaPredicted RBP18.26■□□□□ 0.51
CDCA3-202ENST00000422785 PLEKHH1Q9ULM0 1364 aa18.26■□□□□ 0.51
CDCA3-202ENST00000422785 ZNF521Q96K83 1311 aa18.25■□□□□ 0.51
CDCA3-202ENST00000422785 ANKRD36BQ8N2N9 1353 aa18.24■□□□□ 0.51
CDCA3-202ENST00000422785 PTPRMP28827 1452 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms