RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 PLEKHG1Q9ULL1 1385 aa22.1■■□□□ 1.13
FAM3A-209ENST00000421517 RIMS2Q9UQ26 1411 aa22.09■■□□□ 1.13
FAM3A-209ENST00000421517 MPHOSPH9Q99550 1183 aa22.04■■□□□ 1.12
FAM3A-209ENST00000421517 TBX22Q9Y458 520 aa22.02■■□□□ 1.12
FAM3A-209ENST00000421517 MYO5BQ9ULV0 1848 aa22.01■■□□□ 1.11
FAM3A-209ENST00000421517 CHGAP10645 457 aaKnown RBP22.01■■□□□ 1.11
FAM3A-209ENST00000421517 CLTCL1P53675 1640 aa22.01■■□□□ 1.11
FAM3A-209ENST00000421517 PIK3R4Q99570 1358 aa22■■□□□ 1.11
FAM3A-209ENST00000421517 RAB3GAP2Q9H2M9 1393 aa22■■□□□ 1.11
FAM3A-209ENST00000421517 DIP2AQ14689 1571 aa22■■□□□ 1.11
FAM3A-209ENST00000421517 PPP1R15AO75807 674 aaPredicted RBP22■■□□□ 1.11
FAM3A-209ENST00000421517 KCNA6P17658 529 aa22■■□□□ 1.11
FAM3A-209ENST00000421517 LRRC7Q96NW7 1537 aa21.99■■□□□ 1.11
FAM3A-209ENST00000421517 RPGRIP1LQ68CZ1 1315 aa21.99■■□□□ 1.11
FAM3A-209ENST00000421517 NWD1Q149M9 1564 aa21.97■■□□□ 1.11
FAM3A-209ENST00000421517 NKTRP30414 1462 aaKnown RBP21.96■■□□□ 1.11
FAM3A-209ENST00000421517 STRCP1A6NGW2 1772 aa21.96■■□□□ 1.11
FAM3A-209ENST00000421517 KIF1BO60333 1816 aa21.96■■□□□ 1.11
FAM3A-209ENST00000421517 SLC26A8Q96RN1 970 aa21.95■■□□□ 1.1
FAM3A-209ENST00000421517 ADAMTS13Q76LX8 1427 aa21.95■■□□□ 1.1
FAM3A-209ENST00000421517 SETBP1Q9Y6X0 1596 aa21.95■■□□□ 1.1
FAM3A-209ENST00000421517 CCDC144AA2RUR9 1427 aa21.94■■□□□ 1.1
FAM3A-209ENST00000421517 TOM1O60784 492 aa21.93■■□□□ 1.1
FAM3A-209ENST00000421517 NEXMIFQ5QGS0 1516 aa21.93■■□□□ 1.1
FAM3A-209ENST00000421517 NCOA3Q9Y6Q9 1424 aa21.92■■□□□ 1.1
FAM3A-209ENST00000421517 VGFO15240 615 aaPredicted RBP21.92■■□□□ 1.1
FAM3A-209ENST00000421517 ZNF326Q5BKZ1 582 aaKnown RBP21.92■■□□□ 1.1
FAM3A-209ENST00000421517 BCANQ96GW7 911 aa21.91■■□□□ 1.1
FAM3A-209ENST00000421517 UBAP1LF5GYI3 381 aa21.9■■□□□ 1.1
FAM3A-209ENST00000421517 CHD2O14647 1828 aaKnown RBP21.89■■□□□ 1.09
FAM3A-209ENST00000421517 SPATA31E1Q6ZUB1 1445 aa21.88■■□□□ 1.09
FAM3A-209ENST00000421517 FOXD1Q16676 465 aa21.86■■□□□ 1.09
FAM3A-209ENST00000421517 NRXN3Q9Y4C0 1643 aa21.85■■□□□ 1.09
FAM3A-209ENST00000421517 TMEM94Q12767 1356 aa21.84■■□□□ 1.09
FAM3A-209ENST00000421517 ANKRD30BQ9BXX2 1392 aa21.84■■□□□ 1.09
FAM3A-209ENST00000421517 NUTM2DQ5VT03 806 aaPredicted RBP21.83■■□□□ 1.09
FAM3A-209ENST00000421517 PROSER2Q86WR7 435 aaPredicted RBP21.83■■□□□ 1.09
FAM3A-209ENST00000421517 ALKQ9UM73 1620 aa21.81■■□□□ 1.08
FAM3A-209ENST00000421517 PRAG1Q86YV5 1406 aa21.8■■□□□ 1.08
FAM3A-209ENST00000421517 XIRP1Q702N8 1843 aaKnown RBP21.8■■□□□ 1.08
FAM3A-209ENST00000421517 PPLO60437 1756 aa21.8■■□□□ 1.08
FAM3A-209ENST00000421517 STAC3Q96MF2 364 aa21.78■■□□□ 1.08
FAM3A-209ENST00000421517 AMOTL2Q9Y2J4 779 aa21.77■■□□□ 1.08
FAM3A-209ENST00000421517 PTPRUQ92729 1446 aa21.77■■□□□ 1.08
FAM3A-209ENST00000421517 XRN1Q8IZH2 1706 aaKnown RBP21.76■■□□□ 1.07
FAM3A-209ENST00000421517 METP08581 1390 aa21.75■■□□□ 1.07
FAM3A-209ENST00000421517 MSH6P52701 1360 aa21.75■■□□□ 1.07
FAM3A-209ENST00000421517 IFT172Q9UG01 1749 aa21.75■■□□□ 1.07
FAM3A-209ENST00000421517 FAM135BQ49AJ0 1406 aa21.74■■□□□ 1.07
FAM3A-209ENST00000421517 SETD1AO15047 1707 aaKnown RBP21.72■■□□□ 1.07
FAM3A-209ENST00000421517 MYOM2P54296 1465 aa21.72■■□□□ 1.07
FAM3A-209ENST00000421517 C19orf44Q9H6X5 657 aa21.72■■□□□ 1.07
FAM3A-209ENST00000421517 DCCP43146 1447 aa21.72■■□□□ 1.07
FAM3A-209ENST00000421517 NRXN1Q9ULB1 1477 aa21.71■■□□□ 1.07
FAM3A-209ENST00000421517 RGL3Q3MIN7 710 aa21.71■■□□□ 1.07
FAM3A-209ENST00000421517 PIK3C2GO75747 1445 aa21.71■■□□□ 1.07
FAM3A-209ENST00000421517 PTCH1Q13635 1447 aa21.71■■□□□ 1.07
FAM3A-209ENST00000421517 PIP4K2BP78356 416 aa21.69■■□□□ 1.06
FAM3A-209ENST00000421517 ADGRF5Q8IZF2 1346 aa21.69■■□□□ 1.06
FAM3A-209ENST00000421517 CADPS2Q86UW7 1296 aa21.68■■□□□ 1.06
FAM3A-209ENST00000421517 SENP3Q9H4L4 574 aaPredicted RBP21.67■■□□□ 1.06
FAM3A-209ENST00000421517 SLAIN2Q9P270 581 aa21.65■■□□□ 1.06
FAM3A-209ENST00000421517 TECPR2O15040 1411 aa21.64■■□□□ 1.06
FAM3A-209ENST00000421517 SCAF1Q9H7N4 1312 aaKnown RBP21.64■■□□□ 1.05
FAM3A-209ENST00000421517 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.05
FAM3A-209ENST00000421517 C14orf93Q9H972 538 aaKnown RBP21.64■■□□□ 1.05
FAM3A-209ENST00000421517 HSPA1LP34931 641 aa21.63■■□□□ 1.05
FAM3A-209ENST00000421517 LAMC1P11047 1609 aa21.62■■□□□ 1.05
FAM3A-209ENST00000421517 ABCC11Q96J66 1382 aa21.62■■□□□ 1.05
FAM3A-209ENST00000421517 SIRT1Q96EB6 747 aa21.62■■□□□ 1.05
FAM3A-209ENST00000421517 RBM33Q96EV2 1170 aaKnown RBP21.62■■□□□ 1.05
FAM3A-209ENST00000421517 ADGRL3Q9HAR2 1447 aa21.62■■□□□ 1.05
FAM3A-209ENST00000421517 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.61■■□□□ 1.05
FAM3A-209ENST00000421517 ATF3P18847 181 aa21.61■■□□□ 1.05
FAM3A-209ENST00000421517 LRPPRCP42704 1394 aaKnown RBP21.61■■□□□ 1.05
FAM3A-209ENST00000421517 C14orf37Q86TY3 774 aa21.6■■□□□ 1.05
FAM3A-209ENST00000421517 ROBO2Q9HCK4 1378 aa21.58■■□□□ 1.04
FAM3A-209ENST00000421517 ROBO1Q9Y6N7 1651 aa21.56■■□□□ 1.04
FAM3A-209ENST00000421517 KNDC1Q76NI1 1749 aa21.56■■□□□ 1.04
FAM3A-209ENST00000421517 DHX57Q6P158 1386 aaKnown RBP21.55■■□□□ 1.04
FAM3A-209ENST00000421517 ASXL1Q8IXJ9 1541 aa21.55■■□□□ 1.04
FAM3A-209ENST00000421517 YTHDC2Q9H6S0 1430 aaKnown RBP21.55■■□□□ 1.04
FAM3A-209ENST00000421517 DCAF11Q8TEB1 546 aa21.53■■□□□ 1.04
FAM3A-209ENST00000421517 MST1RQ04912 1400 aa21.53■■□□□ 1.04
FAM3A-209ENST00000421517 CFAP70Q5T0N1 1121 aa21.51■■□□□ 1.03
FAM3A-209ENST00000421517 NALCNQ8IZF0 1738 aa21.51■■□□□ 1.03
FAM3A-209ENST00000421517 DLC1Q96QB1 1528 aa21.5■■□□□ 1.03
FAM3A-209ENST00000421517 AHDC1Q5TGY3 1603 aaPredicted RBP21.49■■□□□ 1.03
FAM3A-209ENST00000421517 ADGRB1O14514 1584 aa21.48■■□□□ 1.03
FAM3A-209ENST00000421517 TMEM132EQ6IEE7 984 aa21.48■■□□□ 1.03
FAM3A-209ENST00000421517 CDC42BPGQ6DT37 1551 aa21.48■■□□□ 1.03
FAM3A-209ENST00000421517 BRINP3Q76B58 766 aa21.47■■□□□ 1.03
FAM3A-209ENST00000421517 C1orf167Q5SNV9 1468 aa21.45■■□□□ 1.02
FAM3A-209ENST00000421517 KIAA1210Q9ULL0 1709 aa21.43■■□□□ 1.02
FAM3A-209ENST00000421517 STK26Q9P289 416 aa21.43■■□□□ 1.02
FAM3A-209ENST00000421517 KDM2AQ9Y2K7 1162 aa21.43■■□□□ 1.02
FAM3A-209ENST00000421517 PHLPP1O60346 1717 aa21.41■■□□□ 1.02
FAM3A-209ENST00000421517 COL16A1Q07092 1604 aaPredicted RBP21.41■■□□□ 1.02
FAM3A-209ENST00000421517 JCADQ9P266 1359 aa21.41■■□□□ 1.02
FAM3A-209ENST00000421517 WAPLQ7Z5K2 1190 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms