RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 ABCA6Q8N139 1617 aa25.7■■□□□ 1.7
CROCCP3-202ENST00000420820 MROH2AA6NES4 1674 aa25.69■■□□□ 1.7
CROCCP3-202ENST00000420820 NLRP13Q86W25 1043 aa25.67■■□□□ 1.7
CROCCP3-202ENST00000420820 NRXN1Q9ULB1 1477 aa25.67■■□□□ 1.7
CROCCP3-202ENST00000420820 ADGRB3O60242 1522 aa25.66■■□□□ 1.7
CROCCP3-202ENST00000420820 PANK3Q9H999 370 aa25.65■■□□□ 1.7
CROCCP3-202ENST00000420820 SYNMO15061 1565 aa25.63■■□□□ 1.69
CROCCP3-202ENST00000420820 NPATQ14207 1427 aa25.62■■□□□ 1.69
CROCCP3-202ENST00000420820 NUDCQ9Y266 331 aa25.61■■□□□ 1.69
CROCCP3-202ENST00000420820 ABCC3O15438 1527 aa25.61■■□□□ 1.69
CROCCP3-202ENST00000420820 RICTORQ6R327 1708 aa25.6■■□□□ 1.69
CROCCP3-202ENST00000420820 INSRP06213 1382 aa25.6■■□□□ 1.69
CROCCP3-202ENST00000420820 EIF3AQ14152 1382 aaKnown RBP25.6■■□□□ 1.69
CROCCP3-202ENST00000420820 MYOM1P52179 1685 aa25.6■■□□□ 1.69
CROCCP3-202ENST00000420820 ZMYM4Q5VZL5 1548 aa25.59■■□□□ 1.69
CROCCP3-202ENST00000420820 IRX6P78412 446 aaPredicted RBP25.59■■□□□ 1.69
CROCCP3-202ENST00000420820 DIP2CQ9Y2E4 1556 aa25.58■■□□□ 1.69
CROCCP3-202ENST00000420820 RNF123Q5XPI4 1314 aa25.58■■□□□ 1.68
CROCCP3-202ENST00000420820 ADGRF5Q8IZF2 1346 aa25.58■■□□□ 1.68
CROCCP3-202ENST00000420820 CDCA8Q53HL2 280 aa25.57■■□□□ 1.68
CROCCP3-202ENST00000420820 PPLO60437 1756 aa25.57■■□□□ 1.68
CROCCP3-202ENST00000420820 MYO3AQ8NEV4 1616 aa25.56■■□□□ 1.68
CROCCP3-202ENST00000420820 GLI2P10070 1586 aa25.56■■□□□ 1.68
CROCCP3-202ENST00000420820 CAMSAP1Q5T5Y3 1602 aa25.56■■□□□ 1.68
CROCCP3-202ENST00000420820 SETBP1Q9Y6X0 1596 aa25.55■■□□□ 1.68
CROCCP3-202ENST00000420820 KDM5AP29375 1690 aaKnown RBP25.54■■□□□ 1.68
CROCCP3-202ENST00000420820 PPP4R2Q9NY27 417 aa25.54■■□□□ 1.68
CROCCP3-202ENST00000420820 CFAP70Q5T0N1 1121 aa25.53■■□□□ 1.68
CROCCP3-202ENST00000420820 CC2D1BQ5T0F9 858 aaKnown RBP25.53■■□□□ 1.68
CROCCP3-202ENST00000420820 SIGLEC1Q9BZZ2 1709 aa25.52■■□□□ 1.68
CROCCP3-202ENST00000420820 CFAP65Q6ZU64 1925 aaKnown RBP25.52■■□□□ 1.68
CROCCP3-202ENST00000420820 NOS1P29475 1434 aa25.52■■□□□ 1.68
CROCCP3-202ENST00000420820 PIK3C2BO00750 1634 aa25.51■■□□□ 1.67
CROCCP3-202ENST00000420820 SLC24A1O60721 1099 aa25.51■■□□□ 1.67
CROCCP3-202ENST00000420820 RAPGEF3O95398 923 aa25.51■■□□□ 1.67
CROCCP3-202ENST00000420820 GGT6Q6P531 493 aa25.5■■□□□ 1.67
CROCCP3-202ENST00000420820 ERVK-7P63135 1459 aa25.49■■□□□ 1.67
CROCCP3-202ENST00000420820 BLMP54132 1417 aaPredicted RBP25.49■■□□□ 1.67
CROCCP3-202ENST00000420820 ZC3H13Q5T200 1668 aaKnown RBP25.49■■□□□ 1.67
CROCCP3-202ENST00000420820 PIK3C2GO75747 1445 aa25.48■■□□□ 1.67
CROCCP3-202ENST00000420820 NPC1L1Q9UHC9 1359 aa25.48■■□□□ 1.67
CROCCP3-202ENST00000420820 SBNO2Q9Y2G9 1366 aa25.48■■□□□ 1.67
CROCCP3-202ENST00000420820 AMER1Q5JTC6 1135 aaPredicted RBP25.48■■□□□ 1.67
CROCCP3-202ENST00000420820 ASXL1Q8IXJ9 1541 aa25.47■■□□□ 1.67
CROCCP3-202ENST00000420820 ARHGAP31Q2M1Z3 1444 aa25.46■■□□□ 1.67
CROCCP3-202ENST00000420820 RPGRIP1LQ68CZ1 1315 aa25.46■■□□□ 1.67
CROCCP3-202ENST00000420820 FAM69CQ0P6D2 419 aa25.45■■□□□ 1.66
CROCCP3-202ENST00000420820 DIP2BQ9P265 1576 aa25.45■■□□□ 1.66
CROCCP3-202ENST00000420820 ADGRB1O14514 1584 aa25.44■■□□□ 1.66
CROCCP3-202ENST00000420820 KNSTRNQ9Y448 316 aa25.44■■□□□ 1.66
CROCCP3-202ENST00000420820 C14orf93Q9H972 538 aaKnown RBP25.42■■□□□ 1.66
CROCCP3-202ENST00000420820 PDE3BQ13370 1112 aa25.41■■□□□ 1.66
CROCCP3-202ENST00000420820 YEATS2Q9ULM3 1422 aa25.4■■□□□ 1.66
CROCCP3-202ENST00000420820 PPP2R1AP30153 589 aa25.39■■□□□ 1.65
CROCCP3-202ENST00000420820 SENP3-EIF4A1A0A087X0R7 540 aa25.37■■□□□ 1.65
CROCCP3-202ENST00000420820 NEXMIFQ5QGS0 1516 aa25.37■■□□□ 1.65
CROCCP3-202ENST00000420820 CHGAP10645 457 aaKnown RBP25.35■■□□□ 1.65
CROCCP3-202ENST00000420820 QRICH2Q9H0J4 1663 aa25.34■■□□□ 1.65
CROCCP3-202ENST00000420820 CENPJQ9HC77 1338 aaPredicted RBP25.33■■□□□ 1.65
CROCCP3-202ENST00000420820 RBM19Q9Y4C8 960 aaKnown RBP25.32■■□□□ 1.64
CROCCP3-202ENST00000420820 KIF13AQ9H1H9 1805 aa25.32■■□□□ 1.64
CROCCP3-202ENST00000420820 PREX1Q8TCU6 1659 aa25.3■■□□□ 1.64
CROCCP3-202ENST00000420820 B4GALNT3Q6L9W6 998 aa25.3■■□□□ 1.64
CROCCP3-202ENST00000420820 ZFYVE9O95405 1425 aa25.3■■□□□ 1.64
CROCCP3-202ENST00000420820 CARD14Q9BXL6 1004 aa25.28■■□□□ 1.64
CROCCP3-202ENST00000420820 ADAMTS8Q9UP79 889 aa25.28■■□□□ 1.64
CROCCP3-202ENST00000420820 REREQ9P2R6 1566 aa25.28■■□□□ 1.64
CROCCP3-202ENST00000420820 ARHGEF28Q8N1W1 1705 aaKnown RBP25.27■■□□□ 1.64
CROCCP3-202ENST00000420820 SLC52A1Q9NWF4 448 aa25.26■■□□□ 1.63
CROCCP3-202ENST00000420820 VGFO15240 615 aaPredicted RBP25.25■■□□□ 1.63
CROCCP3-202ENST00000420820 TMEM131LA2VDJ0 1609 aa25.25■■□□□ 1.63
CROCCP3-202ENST00000420820 MYO5BQ9ULV0 1848 aa25.25■■□□□ 1.63
CROCCP3-202ENST00000420820 IDI1Q13907 227 aa25.25■■□□□ 1.63
CROCCP3-202ENST00000420820 TRAK1Q9UPV9 953 aa25.25■■□□□ 1.63
CROCCP3-202ENST00000420820 RCAN3Q9UKA8 241 aa25.24■■□□□ 1.63
CROCCP3-202ENST00000420820 SALL2Q9Y467 1007 aaPredicted RBP25.24■■□□□ 1.63
CROCCP3-202ENST00000420820 RRP1P56182 461 aaKnown RBP25.23■■□□□ 1.63
CROCCP3-202ENST00000420820 TSPOAP1O95153 1857 aa25.22■■□□□ 1.63
CROCCP3-202ENST00000420820 TMEM132EQ6IEE7 984 aa25.22■■□□□ 1.63
CROCCP3-202ENST00000420820 CDCA7LQ96GN5 454 aa25.22■■□□□ 1.63
CROCCP3-202ENST00000420820 AGLP35573 1532 aa25.21■■□□□ 1.63
CROCCP3-202ENST00000420820 USP32Q8NFA0 1604 aa25.21■■□□□ 1.63
CROCCP3-202ENST00000420820 PUS7Q96PZ0 661 aaKnown RBP25.21■■□□□ 1.63
CROCCP3-202ENST00000420820 WDR43Q15061 677 aaKnown RBP eCLIP25.19■■□□□ 1.62
CROCCP3-202ENST00000420820 ZNF521Q96K83 1311 aa25.18■■□□□ 1.62
CROCCP3-202ENST00000420820 TULP4Q9NRJ4 1543 aa25.16■■□□□ 1.62
CROCCP3-202ENST00000420820 TRHP20396 242 aaPredicted RBP25.16■■□□□ 1.62
CROCCP3-202ENST00000420820 PLEKHH1Q9ULM0 1364 aa25.16■■□□□ 1.62
CROCCP3-202ENST00000420820 PPP6R1Q9UPN7 881 aa25.14■■□□□ 1.61
CROCCP3-202ENST00000420820 NSD3Q9BZ95 1437 aa25.13■■□□□ 1.61
CROCCP3-202ENST00000420820 POLR3AO14802 1390 aaPredicted RBP25.12■■□□□ 1.61
CROCCP3-202ENST00000420820 NUTM2DQ5VT03 806 aaPredicted RBP25.12■■□□□ 1.61
CROCCP3-202ENST00000420820 CCDC136Q96JN2 1154 aa25.12■■□□□ 1.61
CROCCP3-202ENST00000420820 SLC12A5Q9H2X9 1139 aa25.11■■□□□ 1.61
CROCCP3-202ENST00000420820 EVC2Q86UK5 1308 aa25.09■■□□□ 1.61
CROCCP3-202ENST00000420820 SHPRHQ149N8 1683 aa25.07■■□□□ 1.6
CROCCP3-202ENST00000420820 CLTCQ00610 1675 aaKnown RBP25.07■■□□□ 1.6
CROCCP3-202ENST00000420820 PTPRMP28827 1452 aa25.07■■□□□ 1.6
CROCCP3-202ENST00000420820 FBXO31Q5XUX0 539 aaPredicted RBP25.06■■□□□ 1.6
CROCCP3-202ENST00000420820 DUSP27Q5VZP5 1158 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms