RNA–Protein interactions for RNA: ENST00000420774.1

AC004540.1-205, humanhuman

TSL 2

Gene AC004540.1, Length 496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-205ENST00000420774 RIMS2Q9UQ26 1411 aa18.64■□□□□ 0.57
AC004540.1-205ENST00000420774 NUTM2DQ5VT03 806 aaPredicted RBP18.63■□□□□ 0.57
AC004540.1-205ENST00000420774 ANKLE2Q86XL3 938 aa18.63■□□□□ 0.57
AC004540.1-205ENST00000420774 TXNDC2Q86VQ3 553 aa18.62■□□□□ 0.57
AC004540.1-205ENST00000420774 NEXMIFQ5QGS0 1516 aa18.62■□□□□ 0.57
AC004540.1-205ENST00000420774 PPLO60437 1756 aa18.62■□□□□ 0.57
AC004540.1-205ENST00000420774 ZNF326Q5BKZ1 582 aaKnown RBP18.61■□□□□ 0.57
AC004540.1-205ENST00000420774 IFT172Q9UG01 1749 aa18.6■□□□□ 0.57
AC004540.1-205ENST00000420774 MED14O60244 1454 aa18.6■□□□□ 0.57
AC004540.1-205ENST00000420774 NPHP4O75161 1426 aaPredicted RBP18.6■□□□□ 0.57
AC004540.1-205ENST00000420774 SPATA31E1Q6ZUB1 1445 aa18.6■□□□□ 0.57
AC004540.1-205ENST00000420774 EID1Q9Y6B2 187 aa18.58■□□□□ 0.56
AC004540.1-205ENST00000420774 RGL3Q3MIN7 710 aa18.57■□□□□ 0.56
AC004540.1-205ENST00000420774 PPP1R15AO75807 674 aaPredicted RBP18.55■□□□□ 0.56
AC004540.1-205ENST00000420774 NRXN3Q9Y4C0 1643 aa18.55■□□□□ 0.56
AC004540.1-205ENST00000420774 DMRT2Q9Y5R5 561 aa18.54■□□□□ 0.56
AC004540.1-205ENST00000420774 SIN3AQ96ST3 1273 aa18.53■□□□□ 0.56
AC004540.1-205ENST00000420774 PLEKHG1Q9ULL1 1385 aa18.53■□□□□ 0.56
AC004540.1-205ENST00000420774 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.52■□□□□ 0.56
AC004540.1-205ENST00000420774 STRCP1A6NGW2 1772 aa18.51■□□□□ 0.55
AC004540.1-205ENST00000420774 HDGFP51858 240 aaKnown RBP18.5■□□□□ 0.55
AC004540.1-205ENST00000420774 PIAS4Q8N2W9 510 aaPredicted RBP18.5■□□□□ 0.55
AC004540.1-205ENST00000420774 BCANQ96GW7 911 aa18.5■□□□□ 0.55
AC004540.1-205ENST00000420774 SLC26A8Q96RN1 970 aa18.5■□□□□ 0.55
AC004540.1-205ENST00000420774 SETBP1Q9Y6X0 1596 aa18.49■□□□□ 0.55
AC004540.1-205ENST00000420774 ADAMTS13Q76LX8 1427 aa18.49■□□□□ 0.55
AC004540.1-205ENST00000420774 RPGRIP1LQ68CZ1 1315 aa18.49■□□□□ 0.55
AC004540.1-205ENST00000420774 ZNF335Q9H4Z2 1342 aaPredicted RBP18.49■□□□□ 0.55
AC004540.1-205ENST00000420774 SETD1AO15047 1707 aaKnown RBP18.48■□□□□ 0.55
AC004540.1-205ENST00000420774 NEUROD1Q13562 356 aa18.47■□□□□ 0.55
AC004540.1-205ENST00000420774 ADGRF5Q8IZF2 1346 aa18.47■□□□□ 0.55
AC004540.1-205ENST00000420774 LTBP4Q8N2S1 1624 aa18.46■□□□□ 0.55
AC004540.1-205ENST00000420774 DIP2AQ14689 1571 aa18.45■□□□□ 0.54
AC004540.1-205ENST00000420774 MYOM2P54296 1465 aa18.45■□□□□ 0.54
AC004540.1-205ENST00000420774 CHD2O14647 1828 aaKnown RBP18.44■□□□□ 0.54
AC004540.1-205ENST00000420774 VGFO15240 615 aaPredicted RBP18.44■□□□□ 0.54
AC004540.1-205ENST00000420774 ALKQ9UM73 1620 aa18.42■□□□□ 0.54
AC004540.1-205ENST00000420774 NRXN1Q9ULB1 1477 aa18.42■□□□□ 0.54
AC004540.1-205ENST00000420774 DCAF11Q8TEB1 546 aa18.42■□□□□ 0.54
AC004540.1-205ENST00000420774 KDM2AQ9Y2K7 1162 aa18.42■□□□□ 0.54
AC004540.1-205ENST00000420774 PIK3C2GO75747 1445 aa18.41■□□□□ 0.54
AC004540.1-205ENST00000420774 NWD1Q149M9 1564 aa18.4■□□□□ 0.54
AC004540.1-205ENST00000420774 TBX22Q9Y458 520 aa18.39■□□□□ 0.53
AC004540.1-205ENST00000420774 METP08581 1390 aa18.39■□□□□ 0.53
AC004540.1-205ENST00000420774 ASXL1Q8IXJ9 1541 aa18.39■□□□□ 0.53
AC004540.1-205ENST00000420774 XIRP1Q702N8 1843 aaKnown RBP18.38■□□□□ 0.53
AC004540.1-205ENST00000420774 PTPRUQ92729 1446 aa18.38■□□□□ 0.53
AC004540.1-205ENST00000420774 XRN1Q8IZH2 1706 aaKnown RBP18.37■□□□□ 0.53
AC004540.1-205ENST00000420774 CCER1Q8TC90 406 aaPredicted RBP18.37■□□□□ 0.53
AC004540.1-205ENST00000420774 L3MBTL2Q969R5 705 aa18.37■□□□□ 0.53
AC004540.1-205ENST00000420774 LAMC1P11047 1609 aa18.36■□□□□ 0.53
AC004540.1-205ENST00000420774 CPS1P31327 1500 aa18.36■□□□□ 0.53
AC004540.1-205ENST00000420774 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.53
AC004540.1-205ENST00000420774 KCNA6P17658 529 aa18.33■□□□□ 0.52
AC004540.1-205ENST00000420774 CFAP70Q5T0N1 1121 aa18.33■□□□□ 0.52
AC004540.1-205ENST00000420774 TONSLQ96HA7 1378 aa18.32■□□□□ 0.52
AC004540.1-205ENST00000420774 PIK3R4Q99570 1358 aa18.32■□□□□ 0.52
AC004540.1-205ENST00000420774 RBM33Q96EV2 1170 aaKnown RBP18.32■□□□□ 0.52
AC004540.1-205ENST00000420774 NKTRP30414 1462 aaKnown RBP18.32■□□□□ 0.52
AC004540.1-205ENST00000420774 PRAG1Q86YV5 1406 aa18.32■□□□□ 0.52
AC004540.1-205ENST00000420774 TMEM132EQ6IEE7 984 aa18.31■□□□□ 0.52
AC004540.1-205ENST00000420774 AMOTL2Q9Y2J4 779 aa18.31■□□□□ 0.52
AC004540.1-205ENST00000420774 CLSPNQ9HAW4 1339 aa18.3■□□□□ 0.52
AC004540.1-205ENST00000420774 ADRA2BP18089 450 aa18.3■□□□□ 0.52
AC004540.1-205ENST00000420774 CERKQ8TCT0 537 aa18.3■□□□□ 0.52
AC004540.1-205ENST00000420774 C14orf93Q9H972 538 aaKnown RBP18.3■□□□□ 0.52
AC004540.1-205ENST00000420774 ADGRB1O14514 1584 aa18.3■□□□□ 0.52
AC004540.1-205ENST00000420774 KIAA1210Q9ULL0 1709 aa18.29■□□□□ 0.52
AC004540.1-205ENST00000420774 KNDC1Q76NI1 1749 aa18.29■□□□□ 0.52
AC004540.1-205ENST00000420774 TRPM1Q7Z4N2 1603 aa18.28■□□□□ 0.52
AC004540.1-205ENST00000420774 STAC3Q96MF2 364 aa18.27■□□□□ 0.52
AC004540.1-205ENST00000420774 TMEM94Q12767 1356 aa18.27■□□□□ 0.51
AC004540.1-205ENST00000420774 PROSER2Q86WR7 435 aaPredicted RBP18.26■□□□□ 0.51
AC004540.1-205ENST00000420774 YTHDC2Q9H6S0 1430 aaKnown RBP18.25■□□□□ 0.51
AC004540.1-205ENST00000420774 STK26Q9P289 416 aa18.25■□□□□ 0.51
AC004540.1-205ENST00000420774 NALCNQ8IZF0 1738 aa18.24■□□□□ 0.51
AC004540.1-205ENST00000420774 NBPF8Q3BBV2 869 aa18.24■□□□□ 0.51
AC004540.1-205ENST00000420774 ROBO2Q9HCK4 1378 aa18.24■□□□□ 0.51
AC004540.1-205ENST00000420774 IQSEC2Q5JU85 1478 aa18.23■□□□□ 0.51
AC004540.1-205ENST00000420774 LRPPRCP42704 1394 aaKnown RBP18.23■□□□□ 0.51
AC004540.1-205ENST00000420774 NBPF1Q3BBV0 1214 aa18.23■□□□□ 0.51
AC004540.1-205ENST00000420774 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
AC004540.1-205ENST00000420774 PTCH1Q13635 1447 aa18.23■□□□□ 0.51
AC004540.1-205ENST00000420774 TECPR2O15040 1411 aa18.22■□□□□ 0.51
AC004540.1-205ENST00000420774 ARHGEF28Q8N1W1 1705 aaKnown RBP18.21■□□□□ 0.51
AC004540.1-205ENST00000420774 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.2■□□□□ 0.5
AC004540.1-205ENST00000420774 ABCC11Q96J66 1382 aa18.19■□□□□ 0.5
AC004540.1-205ENST00000420774 PLEKHH1Q9ULM0 1364 aa18.19■□□□□ 0.5
AC004540.1-205ENST00000420774 WAPLQ7Z5K2 1190 aa18.18■□□□□ 0.5
AC004540.1-205ENST00000420774 TRAK1Q9UPV9 953 aa18.17■□□□□ 0.5
AC004540.1-205ENST00000420774 DLC1Q96QB1 1528 aa18.17■□□□□ 0.5
AC004540.1-205ENST00000420774 C14orf37Q86TY3 774 aa18.16■□□□□ 0.5
AC004540.1-205ENST00000420774 ROCK2O75116 1388 aaKnown RBP18.16■□□□□ 0.5
AC004540.1-205ENST00000420774 RALGAPBQ86X10 1494 aa18.15■□□□□ 0.5
AC004540.1-205ENST00000420774 MSH6P52701 1360 aa18.15■□□□□ 0.5
AC004540.1-205ENST00000420774 ADGRL3Q9HAR2 1447 aa18.15■□□□□ 0.5
AC004540.1-205ENST00000420774 SAFB2Q14151 953 aaKnown RBP eCLIP18.14■□□□□ 0.49
AC004540.1-205ENST00000420774 NCOA3Q9Y6Q9 1424 aa18.14■□□□□ 0.49
AC004540.1-205ENST00000420774 UBAP1LF5GYI3 381 aa18.13■□□□□ 0.49
AC004540.1-205ENST00000420774 PRAM1Q96QH2 718 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms