RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 ZFYVE27Q5T4F4 411 aa8.56□□□□□ -1.04
CLIP4-205ENST00000415891 CACTIN-AS1Q8N1I8 211 aa8.56□□□□□ -1.04
CLIP4-205ENST00000415891 ATL2Q8NHH9 583 aa8.56□□□□□ -1.04
CLIP4-205ENST00000415891 EXOC5O00471 708 aa8.56□□□□□ -1.04
CLIP4-205ENST00000415891 RNF39Q9H2S5 420 aa8.56□□□□□ -1.04
CLIP4-205ENST00000415891 RAB11FIP3O75154 756 aa8.55□□□□□ -1.04
CLIP4-205ENST00000415891 ZNF662Q6ZS27 426 aa8.55□□□□□ -1.04
CLIP4-205ENST00000415891 KIF4AO95239 1232 aa8.55□□□□□ -1.04
CLIP4-205ENST00000415891 SATB1Q01826 763 aa8.55□□□□□ -1.04
CLIP4-205ENST00000415891 MORC4Q8TE76 937 aa8.55□□□□□ -1.04
CLIP4-205ENST00000415891 DDRGK1Q96HY6 314 aa8.55□□□□□ -1.04
CLIP4-205ENST00000415891 WDR78Q5VTH9 848 aa8.54□□□□□ -1.04
CLIP4-205ENST00000415891 CLEC4GQ6UXB4 293 aa8.54□□□□□ -1.04
CLIP4-205ENST00000415891 WDR70Q9NW82 654 aa8.54□□□□□ -1.04
CLIP4-205ENST00000415891 MAGEC2Q9UBF1 373 aaPredicted RBP8.54□□□□□ -1.04
CLIP4-205ENST00000415891 HMGB1P1B2RPK0 211 aaPredicted RBP8.53□□□□□ -1.04
CLIP4-205ENST00000415891 LIG1P18858 919 aa8.53□□□□□ -1.04
CLIP4-205ENST00000415891 PAX3P23760 479 aa8.53□□□□□ -1.04
CLIP4-205ENST00000415891 ZKSCAN2Q63HK3 967 aa8.53□□□□□ -1.04
CLIP4-205ENST00000415891 CREBRFQ8IUR6 639 aa8.53□□□□□ -1.04
CLIP4-205ENST00000415891 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.53□□□□□ -1.04
CLIP4-205ENST00000415891 HELBQ8NG08 1087 aaPredicted RBP8.53□□□□□ -1.04
CLIP4-205ENST00000415891 FRMD4BQ9Y2L6 1034 aa8.53□□□□□ -1.04
CLIP4-205ENST00000415891 ZBTB12Q9Y330 459 aaPredicted RBP8.53□□□□□ -1.04
CLIP4-205ENST00000415891 ERBB3P21860 1342 aa8.53□□□□□ -1.04
CLIP4-205ENST00000415891 FOSBP53539 338 aa8.52□□□□□ -1.04
CLIP4-205ENST00000415891 P3H3Q8IVL6 736 aa8.52□□□□□ -1.04
CLIP4-205ENST00000415891 BANK1Q8NDB2 785 aa8.52□□□□□ -1.04
CLIP4-205ENST00000415891 RPGRIP1LQ68CZ1 1315 aa8.52□□□□□ -1.05
CLIP4-205ENST00000415891 ZRANB2O95218 330 aaKnown RBP eCLIP8.52□□□□□ -1.05
CLIP4-205ENST00000415891 VASPP50552 380 aaPredicted RBP8.52□□□□□ -1.05
CLIP4-205ENST00000415891 RNF217Q8TC41 542 aa8.52□□□□□ -1.05
CLIP4-205ENST00000415891 KIF20AO95235 890 aa8.51□□□□□ -1.05
CLIP4-205ENST00000415891 CACNB1Q02641 598 aaPredicted RBP8.51□□□□□ -1.05
CLIP4-205ENST00000415891 ZC3H15Q8WU90 426 aaKnown RBP8.51□□□□□ -1.05
CLIP4-205ENST00000415891 CREB3O43889 395 aa8.51□□□□□ -1.05
CLIP4-205ENST00000415891 PRR29P0C7W0 189 aa8.51□□□□□ -1.05
CLIP4-205ENST00000415891 BORCS6Q96GS4 357 aa8.51□□□□□ -1.05
CLIP4-205ENST00000415891 MRVI1Q9Y6F6 885 aa8.51□□□□□ -1.05
CLIP4-205ENST00000415891 SH3BP5O60239 455 aa8.5□□□□□ -1.05
CLIP4-205ENST00000415891 MAF1Q9H063 256 aa8.5□□□□□ -1.05
CLIP4-205ENST00000415891 ZHX1Q9UKY1 873 aaPredicted RBP8.5□□□□□ -1.05
CLIP4-205ENST00000415891 SMC5Q8IY18 1101 aa8.5□□□□□ -1.05
CLIP4-205ENST00000415891 DMTNQ08495 405 aa8.49□□□□□ -1.05
CLIP4-205ENST00000415891 STK26Q9P289 416 aa8.49□□□□□ -1.05
CLIP4-205ENST00000415891 CEP126Q9P2H0 1117 aa8.49□□□□□ -1.05
CLIP4-205ENST00000415891 ZRSR2Q15696 482 aaKnown RBP8.49□□□□□ -1.05
CLIP4-205ENST00000415891 ARHGEF10LQ9HCE6 1279 aa8.49□□□□□ -1.05
CLIP4-205ENST00000415891 TRAK2O60296 914 aa8.48□□□□□ -1.05
CLIP4-205ENST00000415891 ECM2O94769 699 aaPredicted RBP8.48□□□□□ -1.05
CLIP4-205ENST00000415891 TNNT2P45379 298 aaPredicted RBP8.48□□□□□ -1.05
CLIP4-205ENST00000415891 APLP1P51693 650 aa8.48□□□□□ -1.05
CLIP4-205ENST00000415891 PUS10Q3MIT2 529 aaKnown RBP8.48□□□□□ -1.05
CLIP4-205ENST00000415891 PROCA1Q8NCQ7 364 aaPredicted RBP8.48□□□□□ -1.05
CLIP4-205ENST00000415891 UVSSAQ2YD98 709 aa8.47□□□□□ -1.05
CLIP4-205ENST00000415891 METTL14Q9HCE5 456 aaKnown RBP8.47□□□□□ -1.05
CLIP4-205ENST00000415891 CT47B1P0C2W7 299 aaPredicted RBP8.47□□□□□ -1.05
CLIP4-205ENST00000415891 LMOD3Q0VAK6 560 aa8.47□□□□□ -1.05
CLIP4-205ENST00000415891 CCDC97Q96F63 343 aaPredicted RBP8.47□□□□□ -1.05
CLIP4-205ENST00000415891 DRC1Q96MC2 740 aa8.47□□□□□ -1.05
CLIP4-205ENST00000415891 RBM28Q9NW13 759 aaKnown RBP8.47□□□□□ -1.05
CLIP4-205ENST00000415891 ZCRB1Q8TBF4 217 aaKnown RBP8.46□□□□□ -1.05
CLIP4-205ENST00000415891 CLUAP1Q96AJ1 413 aa8.46□□□□□ -1.05
CLIP4-205ENST00000415891 IPO8O15397 1037 aaKnown RBP8.46□□□□□ -1.06
CLIP4-205ENST00000415891 ITFG2Q969R8 447 aa8.46□□□□□ -1.06
CLIP4-205ENST00000415891 MAP7D2Q96T17 732 aa8.46□□□□□ -1.06
CLIP4-205ENST00000415891 KCNA1Q09470 495 aa8.45□□□□□ -1.06
CLIP4-205ENST00000415891 GIMAP6Q6P9H5 292 aa8.45□□□□□ -1.06
CLIP4-205ENST00000415891 CCDC85AQ96PX6 553 aaPredicted RBP8.45□□□□□ -1.06
CLIP4-205ENST00000415891 ZCCHC6Q5VYS8 1495 aaKnown RBP8.45□□□□□ -1.06
CLIP4-205ENST00000415891 C1QBPQ07021 282 aaKnown RBP8.45□□□□□ -1.06
CLIP4-205ENST00000415891 CCDC184Q52MB2 194 aa8.45□□□□□ -1.06
CLIP4-205ENST00000415891 KCNV2Q8TDN2 545 aa8.45□□□□□ -1.06
CLIP4-205ENST00000415891 KLHL42Q9P2K6 505 aa8.45□□□□□ -1.06
CLIP4-205ENST00000415891 ARIH1Q9Y4X5 557 aaPredicted RBP8.45□□□□□ -1.06
CLIP4-205ENST00000415891 PMM1Q92871 262 aa8.44□□□□□ -1.06
CLIP4-205ENST00000415891 TDO2P48775 406 aa8.43□□□□□ -1.06
CLIP4-205ENST00000415891 NEXNQ0ZGT2 675 aa8.43□□□□□ -1.06
CLIP4-205ENST00000415891 SNRNP27Q8WVK2 155 aaKnown RBP8.43□□□□□ -1.06
CLIP4-205ENST00000415891 TPM2P07951 284 aa8.42□□□□□ -1.06
CLIP4-205ENST00000415891 CHGAP10645 457 aaKnown RBP8.42□□□□□ -1.06
CLIP4-205ENST00000415891 BDNFP23560 247 aa8.42□□□□□ -1.06
CLIP4-205ENST00000415891 VTI1AQ96AJ9 217 aa8.42□□□□□ -1.06
CLIP4-205ENST00000415891 CDCA7Q9BWT1 371 aaPredicted RBP8.42□□□□□ -1.06
CLIP4-205ENST00000415891 SYNPO2Q9UMS6 1093 aa8.42□□□□□ -1.06
CLIP4-205ENST00000415891 SMC3Q9UQE7 1217 aa8.42□□□□□ -1.06
CLIP4-205ENST00000415891 GOLGA6L3A6NEY3 463 aa8.42□□□□□ -1.06
CLIP4-205ENST00000415891 STK10O94804 968 aaKnown RBP8.42□□□□□ -1.06
CLIP4-205ENST00000415891 EP400NLQ6ZTU2 488 aa8.42□□□□□ -1.06
CLIP4-205ENST00000415891 SPOCK3Q9BQ16 436 aa8.42□□□□□ -1.06
CLIP4-205ENST00000415891 IRF2BPLQ9H1B7 796 aa8.42□□□□□ -1.06
CLIP4-205ENST00000415891 CEP83Q9Y592 693 aa8.42□□□□□ -1.06
CLIP4-205ENST00000415891 SLC4A2P04920 1241 aa8.41□□□□□ -1.06
CLIP4-205ENST00000415891 FAM200BP0CF97 657 aa8.41□□□□□ -1.06
CLIP4-205ENST00000415891 GYS2P54840 703 aa8.41□□□□□ -1.06
CLIP4-205ENST00000415891 HDGFL1Q5TGJ6 251 aa8.41□□□□□ -1.06
CLIP4-205ENST00000415891 CHMP4CQ96CF2 233 aa8.41□□□□□ -1.06
CLIP4-205ENST00000415891 FAM210AQ96ND0 272 aa8.41□□□□□ -1.06
CLIP4-205ENST00000415891 JADE2Q9NQC1 790 aa8.41□□□□□ -1.06
CLIP4-205ENST00000415891 KIAA1522Q9P206 1035 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms