RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 CHMP3Q9Y3E7 222 aa10.54□□□□□ -0.72
CTNND1-206ENST00000415361 ESCO1Q5FWF5 840 aa10.54□□□□□ -0.72
CTNND1-206ENST00000415361 BIVM-ERCC5R4GMW8 1640 aa10.54□□□□□ -0.72
CTNND1-206ENST00000415361 TIAM1Q13009 1591 aa10.54□□□□□ -0.72
CTNND1-206ENST00000415361 SMC4Q9NTJ3 1288 aa10.54□□□□□ -0.72
CTNND1-206ENST00000415361 TCERG1O14776 1098 aaKnown RBP10.53□□□□□ -0.72
CTNND1-206ENST00000415361 CEBPAP49715 358 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-206ENST00000415361 SUPT6HQ7KZ85 1726 aaKnown RBP10.53□□□□□ -0.72
CTNND1-206ENST00000415361 SLC52A1Q9NWF4 448 aa10.53□□□□□ -0.72
CTNND1-206ENST00000415361 PCF11O94913 1555 aaKnown RBP10.53□□□□□ -0.72
CTNND1-206ENST00000415361 B4GALNT3Q6L9W6 998 aa10.53□□□□□ -0.72
CTNND1-206ENST00000415361 PIP4K2BP78356 416 aa10.52□□□□□ -0.73
CTNND1-206ENST00000415361 NLRP13Q86W25 1043 aa10.52□□□□□ -0.73
CTNND1-206ENST00000415361 DAPK1P53355 1430 aa10.52□□□□□ -0.73
CTNND1-206ENST00000415361 APBB1O00213 710 aa10.52□□□□□ -0.73
CTNND1-206ENST00000415361 HSP90B1P14625 803 aaKnown RBP10.52□□□□□ -0.73
CTNND1-206ENST00000415361 GTF2E1P29083 439 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-206ENST00000415361 LRRFIP1Q32MZ4 808 aaKnown RBP10.52□□□□□ -0.73
CTNND1-206ENST00000415361 C1orf141Q5JVX7 400 aa10.51□□□□□ -0.73
CTNND1-206ENST00000415361 PHF23Q9BUL5 403 aaPredicted RBP10.51□□□□□ -0.73
CTNND1-206ENST00000415361 SYTL4Q96C24 671 aaPredicted RBP10.51□□□□□ -0.73
CTNND1-206ENST00000415361 USP35Q9P2H5 1018 aa10.51□□□□□ -0.73
CTNND1-206ENST00000415361 KIF14Q15058 1648 aa10.51□□□□□ -0.73
CTNND1-206ENST00000415361 RRBP1Q9P2E9 1410 aaKnown RBP10.51□□□□□ -0.73
CTNND1-206ENST00000415361 PRAM1Q96QH2 718 aa10.51□□□□□ -0.73
CTNND1-206ENST00000415361 RRP7AQ9Y3A4 280 aaKnown RBP10.51□□□□□ -0.73
CTNND1-206ENST00000415361 STAC3Q96MF2 364 aa10.5□□□□□ -0.73
CTNND1-206ENST00000415361 MSH5O43196 834 aa10.5□□□□□ -0.73
CTNND1-206ENST00000415361 TRIM6-TRIM34B2RNG4 842 aa10.5□□□□□ -0.73
CTNND1-206ENST00000415361 NLRP6P59044 892 aa10.5□□□□□ -0.73
CTNND1-206ENST00000415361 CCDC141Q6ZP82 1450 aa10.49□□□□□ -0.73
CTNND1-206ENST00000415361 FANCAO15360 1455 aa10.49□□□□□ -0.73
CTNND1-206ENST00000415361 DENND4BO75064 1496 aaPredicted RBP10.49□□□□□ -0.73
CTNND1-206ENST00000415361 FRAT2O75474 233 aaPredicted RBP10.49□□□□□ -0.73
CTNND1-206ENST00000415361 NUTM2BA6NNL0 878 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-206ENST00000415361 NUTM2EB1AL46 878 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-206ENST00000415361 NUTM2AQ8IVF1 878 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-206ENST00000415361 ASXL2Q76L83 1435 aa10.48□□□□□ -0.73
CTNND1-206ENST00000415361 NOC3LQ8WTT2 800 aaKnown RBP10.48□□□□□ -0.73
CTNND1-206ENST00000415361 GGNBP2Q9H3C7 697 aa10.48□□□□□ -0.73
CTNND1-206ENST00000415361 GPRASP1Q5JY77 1395 aa10.48□□□□□ -0.73
CTNND1-206ENST00000415361 AMOTL1Q8IY63 956 aa10.48□□□□□ -0.73
CTNND1-206ENST00000415361 RASSF8Q8NHQ8 419 aa10.48□□□□□ -0.73
CTNND1-206ENST00000415361 FBXO31Q5XUX0 539 aaPredicted RBP10.47□□□□□ -0.73
CTNND1-206ENST00000415361 ABTB2Q8N961 1025 aa10.47□□□□□ -0.73
CTNND1-206ENST00000415361 NLRP2Q9NX02 1062 aa10.47□□□□□ -0.73
CTNND1-206ENST00000415361 CAMSAP2Q08AD1 1489 aa10.47□□□□□ -0.73
CTNND1-206ENST00000415361 PHF14O94880 888 aa10.47□□□□□ -0.73
CTNND1-206ENST00000415361 NGEFQ8N5V2 710 aa10.47□□□□□ -0.73
CTNND1-206ENST00000415361 NOL10Q9BSC4 688 aaKnown RBP10.47□□□□□ -0.73
CTNND1-206ENST00000415361 SLC4A10Q6U841 1118 aa10.46□□□□□ -0.73
CTNND1-206ENST00000415361 MYBBP1AQ9BQG0 1328 aaKnown RBP10.46□□□□□ -0.73
CTNND1-206ENST00000415361 ST18O60284 1047 aa10.46□□□□□ -0.73
CTNND1-206ENST00000415361 TEFQ10587 303 aa10.46□□□□□ -0.73
CTNND1-206ENST00000415361 KIF16BQ96L93 1317 aa10.46□□□□□ -0.73
CTNND1-206ENST00000415361 NBPF1Q3BBV0 1214 aa10.46□□□□□ -0.73
CTNND1-206ENST00000415361 ERBINQ96RT1 1412 aa10.46□□□□□ -0.73
CTNND1-206ENST00000415361 EIF4G3O43432 1585 aaKnown RBP10.46□□□□□ -0.74
CTNND1-206ENST00000415361 HFM1A2PYH4 1435 aa10.46□□□□□ -0.74
CTNND1-206ENST00000415361 MARCH6O60337 910 aa10.45□□□□□ -0.74
CTNND1-206ENST00000415361 AKNAQ7Z591 1439 aa10.45□□□□□ -0.74
CTNND1-206ENST00000415361 TTC5Q8N0Z6 440 aa10.45□□□□□ -0.74
CTNND1-206ENST00000415361 KIAA1107Q9UPP5 1409 aa10.45□□□□□ -0.74
CTNND1-206ENST00000415361 ELL2O00472 640 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-206ENST00000415361 NEXNQ0ZGT2 675 aa10.45□□□□□ -0.74
CTNND1-206ENST00000415361 DIAPH1O60610 1272 aaKnown RBP10.45□□□□□ -0.74
CTNND1-206ENST00000415361 RAPGEF4Q8WZA2 1011 aa10.44□□□□□ -0.74
CTNND1-206ENST00000415361 CEP89Q96ST8 783 aa10.44□□□□□ -0.74
CTNND1-206ENST00000415361 STRN4Q9NRL3 753 aa10.44□□□□□ -0.74
CTNND1-206ENST00000415361 WDR62O43379 1518 aa10.44□□□□□ -0.74
CTNND1-206ENST00000415361 XPCQ01831 940 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-206ENST00000415361 SPRYD3Q8NCJ5 442 aa10.43□□□□□ -0.74
CTNND1-206ENST00000415361 ROCK1Q13464 1354 aa10.43□□□□□ -0.74
CTNND1-206ENST00000415361 TOMM22Q9NS69 142 aa10.43□□□□□ -0.74
CTNND1-206ENST00000415361 AKAP17AQ02040 695 aaKnown RBP10.43□□□□□ -0.74
CTNND1-206ENST00000415361 SYNE3Q6ZMZ3 975 aa10.43□□□□□ -0.74
CTNND1-206ENST00000415361 RBM33Q96EV2 1170 aaKnown RBP10.43□□□□□ -0.74
CTNND1-206ENST00000415361 CDK19Q9BWU1 502 aa10.43□□□□□ -0.74
CTNND1-206ENST00000415361 TRIM34Q9BYJ4 488 aa10.43□□□□□ -0.74
CTNND1-206ENST00000415361 MFAP1P55081 439 aaKnown RBP10.42□□□□□ -0.74
CTNND1-206ENST00000415361 NCBP3Q53F19 620 aaKnown RBP10.42□□□□□ -0.74
CTNND1-206ENST00000415361 ADAMTS12P58397 1594 aa10.42□□□□□ -0.74
CTNND1-206ENST00000415361 E9PSI1 815 aa10.42□□□□□ -0.74
CTNND1-206ENST00000415361 DDX58O95786 925 aaKnown RBP10.42□□□□□ -0.74
CTNND1-206ENST00000415361 WWC1Q8IX03 1113 aa10.42□□□□□ -0.74
CTNND1-206ENST00000415361 ATP10BO94823 1461 aa10.42□□□□□ -0.74
CTNND1-206ENST00000415361 TPM2P07951 284 aa10.42□□□□□ -0.74
CTNND1-206ENST00000415361 ATP6V1DQ9Y5K8 247 aa10.42□□□□□ -0.74
CTNND1-206ENST00000415361 WASHC2AQ641Q2 1341 aa10.42□□□□□ -0.74
CTNND1-206ENST00000415361 HMOX1P09601 288 aa10.41□□□□□ -0.74
CTNND1-206ENST00000415361 ANO8Q9HCE9 1232 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-206ENST00000415361 RUFY2Q8WXA3 655 aa10.41□□□□□ -0.74
CTNND1-206ENST00000415361 CLUAP1Q96AJ1 413 aa10.41□□□□□ -0.74
CTNND1-206ENST00000415361 THOC2Q8NI27 1593 aaKnown RBP10.41□□□□□ -0.74
CTNND1-206ENST00000415361 TEX14Q8IWB6 1497 aa10.41□□□□□ -0.74
CTNND1-206ENST00000415361 TPM3P06753 285 aa10.41□□□□□ -0.74
CTNND1-206ENST00000415361 EIF2S2P20042 333 aaKnown RBP10.41□□□□□ -0.74
CTNND1-206ENST00000415361 CTDP1Q9Y5B0 961 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-206ENST00000415361 ABCC5O15440 1437 aa10.41□□□□□ -0.74
CTNND1-206ENST00000415361 SF3A1Q15459 793 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms