RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 PRDM2Q13029 1718 aa16.89■□□□□ 0.29
SMARCA4-202ENST00000413806 ATP6V1DQ9Y5K8 247 aa16.89■□□□□ 0.29
SMARCA4-202ENST00000413806 DZIP1LQ8IYY4 767 aaKnown RBP16.88■□□□□ 0.29
SMARCA4-202ENST00000413806 NOL8Q76FK4 1167 aaKnown RBP16.88■□□□□ 0.29
SMARCA4-202ENST00000413806 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.87■□□□□ 0.29
SMARCA4-202ENST00000413806 ISY1Q9ULR0 285 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-202ENST00000413806 ARAP1Q96P48 1450 aa16.86■□□□□ 0.29
SMARCA4-202ENST00000413806 LTV1Q96GA3 475 aaPredicted RBP16.86■□□□□ 0.29
SMARCA4-202ENST00000413806 SLC4A3P48751 1232 aa16.86■□□□□ 0.29
SMARCA4-202ENST00000413806 REC8O95072 547 aa16.86■□□□□ 0.29
SMARCA4-202ENST00000413806 MINK1Q8N4C8 1332 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-202ENST00000413806 APPP05067 770 aa16.85■□□□□ 0.29
SMARCA4-202ENST00000413806 SYNJ1O43426 1573 aa16.85■□□□□ 0.29
SMARCA4-202ENST00000413806 EHBP1L1Q8N3D4 1523 aa16.85■□□□□ 0.29
SMARCA4-202ENST00000413806 RILPL2Q969X0 211 aa16.84■□□□□ 0.29
SMARCA4-202ENST00000413806 ZNF644Q9H582 1327 aaPredicted RBP16.84■□□□□ 0.29
SMARCA4-202ENST00000413806 ELL2O00472 640 aaPredicted RBP16.84■□□□□ 0.29
SMARCA4-202ENST00000413806 DDX49Q9Y6V7 483 aaKnown RBP16.84■□□□□ 0.29
SMARCA4-202ENST00000413806 C1orf141Q5JVX7 400 aa16.84■□□□□ 0.29
SMARCA4-202ENST00000413806 FAM43AQ8N2R8 423 aa16.84■□□□□ 0.29
SMARCA4-202ENST00000413806 WASHC2AQ641Q2 1341 aa16.84■□□□□ 0.29
SMARCA4-202ENST00000413806 RIPK4P57078 832 aa16.83■□□□□ 0.29
SMARCA4-202ENST00000413806 RUFY2Q8WXA3 655 aa16.82■□□□□ 0.28
SMARCA4-202ENST00000413806 GRIN2BQ13224 1484 aa16.82■□□□□ 0.28
SMARCA4-202ENST00000413806 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.81■□□□□ 0.28
SMARCA4-202ENST00000413806 CHMP5Q9NZZ3 219 aa16.81■□□□□ 0.28
SMARCA4-202ENST00000413806 NUTM2FA1L443 756 aa16.8■□□□□ 0.28
SMARCA4-202ENST00000413806 GNAI1P63096 354 aa16.8■□□□□ 0.28
SMARCA4-202ENST00000413806 TEX35Q5T0J7 233 aa16.8■□□□□ 0.28
SMARCA4-202ENST00000413806 MAP7D2Q96T17 732 aa16.8■□□□□ 0.28
SMARCA4-202ENST00000413806 CFTRP13569 1480 aa16.8■□□□□ 0.28
SMARCA4-202ENST00000413806 H3BQV1 296 aa16.8■□□□□ 0.28
SMARCA4-202ENST00000413806 IFFO2Q5TF58 517 aa16.8■□□□□ 0.28
SMARCA4-202ENST00000413806 DIAPH3Q9NSV4 1193 aa16.8■□□□□ 0.28
SMARCA4-202ENST00000413806 TOP2BQ02880 1626 aa16.8■□□□□ 0.28
SMARCA4-202ENST00000413806 TEFQ10587 303 aa16.79■□□□□ 0.28
SMARCA4-202ENST00000413806 SF3A1Q15459 793 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-202ENST00000413806 TMX4Q9H1E5 349 aaPredicted RBP16.79■□□□□ 0.28
SMARCA4-202ENST00000413806 LRRFIP1Q32MZ4 808 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-202ENST00000413806 GPS2Q13227 327 aa16.79■□□□□ 0.28
SMARCA4-202ENST00000413806 PRXQ9BXM0 1461 aa16.78■□□□□ 0.28
SMARCA4-202ENST00000413806 HFM1A2PYH4 1435 aa16.78■□□□□ 0.28
SMARCA4-202ENST00000413806 CLSTN1O94985 981 aa16.78■□□□□ 0.28
SMARCA4-202ENST00000413806 FOXD4L5Q5VV16 416 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-202ENST00000413806 FOXD4L4Q8WXT5 416 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-202ENST00000413806 MTERF4Q7Z6M4 381 aaKnown RBP16.77■□□□□ 0.28
SMARCA4-202ENST00000413806 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.282e-7■■■■□ 24.9
SMARCA4-202ENST00000413806 NEXNQ0ZGT2 675 aa16.77■□□□□ 0.28
SMARCA4-202ENST00000413806 FAM184AQ8NB25 1140 aa16.77■□□□□ 0.28
SMARCA4-202ENST00000413806 SCAPERQ9BY12 1400 aa16.77■□□□□ 0.28
SMARCA4-202ENST00000413806 ARHGAP5Q13017 1502 aa16.77■□□□□ 0.27
SMARCA4-202ENST00000413806 TPM2P07951 284 aa16.76■□□□□ 0.27
SMARCA4-202ENST00000413806 IL27Q8NEV9 243 aa16.76■□□□□ 0.27
SMARCA4-202ENST00000413806 SYNJ2O15056 1496 aa16.76■□□□□ 0.27
SMARCA4-202ENST00000413806 INTS3Q68E01 1043 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-202ENST00000413806 TIAM1Q13009 1591 aa16.76■□□□□ 0.27
SMARCA4-202ENST00000413806 ZKSCAN1P17029 563 aaPredicted RBP16.75■□□□□ 0.27
SMARCA4-202ENST00000413806 NOM1Q5C9Z4 860 aaKnown RBP16.75■□□□□ 0.27
SMARCA4-202ENST00000413806 RASSF8Q8NHQ8 419 aa16.75■□□□□ 0.27
SMARCA4-202ENST00000413806 KIAA1107Q9UPP5 1409 aa16.75■□□□□ 0.27
SMARCA4-202ENST00000413806 HECW1Q76N89 1606 aa16.74■□□□□ 0.27
SMARCA4-202ENST00000413806 C9orf78Q9NZ63 289 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-202ENST00000413806 TOMM22Q9NS69 142 aa16.73■□□□□ 0.27
SMARCA4-202ENST00000413806 GOLGA6L19H0YKK7 550 aa16.73■□□□□ 0.27
SMARCA4-202ENST00000413806 NUCB2P80303 420 aa16.73■□□□□ 0.27
SMARCA4-202ENST00000413806 HSP90AB4PQ58FF6 505 aa16.73■□□□□ 0.27
SMARCA4-202ENST00000413806 DDX58O95786 925 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-202ENST00000413806 PLEKHH2Q8IVE3 1493 aa16.72■□□□□ 0.27
SMARCA4-202ENST00000413806 TTC5Q8N0Z6 440 aa16.72■□□□□ 0.27
SMARCA4-202ENST00000413806 IFIT2P09913 472 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-202ENST00000413806 ZNF592Q92610 1267 aa16.72■□□□□ 0.27
SMARCA4-202ENST00000413806 BRPF3Q9ULD4 1205 aa16.71■□□□□ 0.27
SMARCA4-202ENST00000413806 C22orf23Q9BZE7 217 aa16.71■□□□□ 0.27
SMARCA4-202ENST00000413806 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMARCA4-202ENST00000413806 ADAMTS8Q9UP79 889 aa16.71■□□□□ 0.27
SMARCA4-202ENST00000413806 TPM3P06753 285 aa16.71■□□□□ 0.27
SMARCA4-202ENST00000413806 R3HCC1Q9Y3T6 440 aaKnown RBP16.71■□□□□ 0.27
SMARCA4-202ENST00000413806 RNF20Q5VTR2 975 aa16.7■□□□□ 0.26
SMARCA4-202ENST00000413806 PPP2R1AP30153 589 aa16.7■□□□□ 0.26
SMARCA4-202ENST00000413806 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
SMARCA4-202ENST00000413806 ANO2Q9NQ90 1003 aa16.7■□□□□ 0.26
SMARCA4-202ENST00000413806 CCDC9Q9Y3X0 531 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-202ENST00000413806 EIF2S2P20042 333 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-202ENST00000413806 CPLX2Q6PUV4 134 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-202ENST00000413806 CCAR2Q8N163 923 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-202ENST00000413806 BECN2A8MW95 431 aa16.69■□□□□ 0.26
SMARCA4-202ENST00000413806 FKBP5Q13451 457 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-202ENST00000413806 HMGXB3Q12766 1538 aa16.69■□□□□ 0.26
SMARCA4-202ENST00000413806 C9orf84Q5VXU9 1444 aa16.69■□□□□ 0.26
SMARCA4-202ENST00000413806 CCDC66A2RUB6 948 aa16.69■□□□□ 0.26
SMARCA4-202ENST00000413806 CDC45O75419 566 aa16.68■□□□□ 0.26
SMARCA4-202ENST00000413806 SYNE3Q6ZMZ3 975 aa16.68■□□□□ 0.26
SMARCA4-202ENST00000413806 PANK1Q8TE04 598 aa16.68■□□□□ 0.26
SMARCA4-202ENST00000413806 SUPT6HQ7KZ85 1726 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-202ENST00000413806 NINLQ9Y2I6 1382 aa16.68■□□□□ 0.26
SMARCA4-202ENST00000413806 FRAT2O75474 233 aaPredicted RBP16.68■□□□□ 0.26
SMARCA4-202ENST00000413806 NFKBIBQ15653 356 aa16.68■□□□□ 0.26
SMARCA4-202ENST00000413806 TSPYL4Q9UJ04 414 aa16.68■□□□□ 0.26
SMARCA4-202ENST00000413806 PATL2C9JE40 543 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-202ENST00000413806 AKAP17AQ02040 695 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms