RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 MYO5BQ9ULV0 1848 aa39.56■■■■□ 3.92
VEGFA-207ENST00000413642 LRRC7Q96NW7 1537 aa39.55■■■■□ 3.92
VEGFA-207ENST00000413642 PPP1R15AO75807 674 aaPredicted RBP39.54■■■■□ 3.92
VEGFA-207ENST00000413642 HDGFP51858 240 aaKnown RBP39.5■■■■□ 3.91
VEGFA-207ENST00000413642 PLEKHG1Q9ULL1 1385 aa39.49■■■■□ 3.91
VEGFA-207ENST00000413642 SLC4A1APQ9BWU0 796 aaKnown RBP39.49■■■■□ 3.91
VEGFA-207ENST00000413642 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.47■■■■□ 3.91
VEGFA-207ENST00000413642 SPHKAPQ2M3C7 1700 aa39.46■■■■□ 3.91
VEGFA-207ENST00000413642 PIP4K2BP78356 416 aa39.46■■■■□ 3.91
VEGFA-207ENST00000413642 TOM1O60784 492 aa39.45■■■■□ 3.91
VEGFA-207ENST00000413642 KCNA6P17658 529 aa39.45■■■■□ 3.91
VEGFA-207ENST00000413642 SCAF1Q9H7N4 1312 aaKnown RBP39.44■■■■□ 3.9
VEGFA-207ENST00000413642 FOXD1Q16676 465 aa39.4■■■■□ 3.9
VEGFA-207ENST00000413642 TRPM2O94759 1503 aa39.39■■■■□ 3.9
VEGFA-207ENST00000413642 ZNF326Q5BKZ1 582 aaKnown RBP39.38■■■■□ 3.89
VEGFA-207ENST00000413642 RBM33Q96EV2 1170 aaKnown RBP39.38■■■■□ 3.89
VEGFA-207ENST00000413642 CLTCL1P53675 1640 aa39.38■■■■□ 3.89
VEGFA-207ENST00000413642 ALKQ9UM73 1620 aa39.37■■■■□ 3.89
VEGFA-207ENST00000413642 ADAMTS13Q76LX8 1427 aa39.34■■■■□ 3.89
VEGFA-207ENST00000413642 TBX22Q9Y458 520 aa39.34■■■■□ 3.89
VEGFA-207ENST00000413642 PROSER2Q86WR7 435 aaPredicted RBP39.33■■■■□ 3.89
VEGFA-207ENST00000413642 TMEM94Q12767 1356 aa39.33■■■■□ 3.89
VEGFA-207ENST00000413642 MPHOSPH9Q99550 1183 aa39.3■■■■□ 3.88
VEGFA-207ENST00000413642 SETD5Q9C0A6 1442 aa39.29■■■■□ 3.88
VEGFA-207ENST00000413642 HSPA1LP34931 641 aa39.27■■■■□ 3.88
VEGFA-207ENST00000413642 NWD1Q149M9 1564 aa39.26■■■■□ 3.88
VEGFA-207ENST00000413642 XIRP1Q702N8 1843 aaKnown RBP39.24■■■■□ 3.87
VEGFA-207ENST00000413642 NKTRP30414 1462 aaKnown RBP39.21■■■■□ 3.87
VEGFA-207ENST00000413642 NEXMIFQ5QGS0 1516 aa39.18■■■■□ 3.86
VEGFA-207ENST00000413642 RAB3GAP2Q9H2M9 1393 aa39.18■■■■□ 3.86
VEGFA-207ENST00000413642 DIP2AQ14689 1571 aa39.15■■■■□ 3.86
VEGFA-207ENST00000413642 PTPRUQ92729 1446 aa39.14■■■■□ 3.86
VEGFA-207ENST00000413642 CHD2O14647 1828 aaKnown RBP39.14■■■■□ 3.86
VEGFA-207ENST00000413642 NRXN3Q9Y4C0 1643 aa39.13■■■■□ 3.85
VEGFA-207ENST00000413642 PIK3R4Q99570 1358 aa39.12■■■■□ 3.85
VEGFA-207ENST00000413642 AMOTL2Q9Y2J4 779 aa39.12■■■■□ 3.85
VEGFA-207ENST00000413642 KIF1BO60333 1816 aa39.12■■■■□ 3.85
VEGFA-207ENST00000413642 SETBP1Q9Y6X0 1596 aa39.1■■■■□ 3.85
VEGFA-207ENST00000413642 METP08581 1390 aa39.08■■■■□ 3.85
VEGFA-207ENST00000413642 CCDC144AA2RUR9 1427 aa39.06■■■■□ 3.84
VEGFA-207ENST00000413642 RPGRIP1LQ68CZ1 1315 aa39.05■■■■□ 3.84
VEGFA-207ENST00000413642 DISP3Q9P2K9 1392 aa39.05■■■■□ 3.84
VEGFA-207ENST00000413642 VGFO15240 615 aaPredicted RBP39.04■■■■□ 3.84
VEGFA-207ENST00000413642 ACIN1Q9UKV3 1341 aaKnown RBP39.04■■■■□ 3.84
VEGFA-207ENST00000413642 MSH6P52701 1360 aa39.04■■■■□ 3.84
VEGFA-207ENST00000413642 RGL3Q3MIN7 710 aa39.03■■■■□ 3.84
VEGFA-207ENST00000413642 C14orf37Q86TY3 774 aa39.01■■■■□ 3.84
VEGFA-207ENST00000413642 SPATA31E1Q6ZUB1 1445 aa38.97■■■■□ 3.83
VEGFA-207ENST00000413642 FAM135BQ49AJ0 1406 aa38.96■■■■□ 3.83
VEGFA-207ENST00000413642 NCOA3Q9Y6Q9 1424 aa38.95■■■■□ 3.83
VEGFA-207ENST00000413642 SLAIN2Q9P270 581 aa38.94■■■■□ 3.82
VEGFA-207ENST00000413642 ADGRF5Q8IZF2 1346 aa38.91■■■■□ 3.82
VEGFA-207ENST00000413642 XRN1Q8IZH2 1706 aaKnown RBP38.91■■■■□ 3.82
VEGFA-207ENST00000413642 C19orf44Q9H6X5 657 aa38.89■■■■□ 3.82
VEGFA-207ENST00000413642 PPLO60437 1756 aa38.87■■■■□ 3.81
VEGFA-207ENST00000413642 HRCP23327 699 aa38.85■■■■□ 3.81
VEGFA-207ENST00000413642 ATF3P18847 181 aa38.83■■■■□ 3.81
VEGFA-207ENST00000413642 ROBO1Q9Y6N7 1651 aa38.83■■■■□ 3.81
VEGFA-207ENST00000413642 CADPS2Q86UW7 1296 aa38.81■■■■□ 3.8
VEGFA-207ENST00000413642 ILDR2Q71H61 639 aa38.8■■■■□ 3.8
VEGFA-207ENST00000413642 ANKRD30BQ9BXX2 1392 aa38.8■■■■□ 3.8
VEGFA-207ENST00000413642 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.8■■■■□ 3.8
VEGFA-207ENST00000413642 SETD1AO15047 1707 aaKnown RBP38.79■■■■□ 3.8
VEGFA-207ENST00000413642 ROBO2Q9HCK4 1378 aa38.76■■■■□ 3.8
VEGFA-207ENST00000413642 MED1Q15648 1581 aaPredicted RBP38.74■■■■□ 3.79
VEGFA-207ENST00000413642 IFT172Q9UG01 1749 aa38.7■■■■□ 3.79
VEGFA-207ENST00000413642 ADGRL3Q9HAR2 1447 aa38.69■■■■□ 3.78
VEGFA-207ENST00000413642 TMEM132EQ6IEE7 984 aa38.68■■■■□ 3.78
VEGFA-207ENST00000413642 PTCH1Q13635 1447 aa38.68■■■■□ 3.78
VEGFA-207ENST00000413642 PIK3C2GO75747 1445 aa38.67■■■■□ 3.78
VEGFA-207ENST00000413642 DCCP43146 1447 aa38.67■■■■□ 3.78
VEGFA-207ENST00000413642 STK26Q9P289 416 aa38.67■■■■□ 3.78
VEGFA-207ENST00000413642 BRINP3Q76B58 766 aa38.64■■■■□ 3.78
VEGFA-207ENST00000413642 MST1RQ04912 1400 aa38.63■■■■□ 3.78
VEGFA-207ENST00000413642 PRAG1Q86YV5 1406 aa38.63■■■■□ 3.77
VEGFA-207ENST00000413642 ASXL1Q8IXJ9 1541 aa38.61■■■■□ 3.77
VEGFA-207ENST00000413642 NALCNQ8IZF0 1738 aa38.6■■■■□ 3.77
VEGFA-207ENST00000413642 CFAP70Q5T0N1 1121 aa38.59■■■■□ 3.77
VEGFA-207ENST00000413642 C14orf93Q9H972 538 aaKnown RBP38.59■■■■□ 3.77
VEGFA-207ENST00000413642 NRXN1Q9ULB1 1477 aa38.58■■■■□ 3.77
VEGFA-207ENST00000413642 LRPPRCP42704 1394 aaKnown RBP38.57■■■■□ 3.77
VEGFA-207ENST00000413642 MYOM2P54296 1465 aa38.57■■■■□ 3.76
VEGFA-207ENST00000413642 PHLPP1O60346 1717 aa38.56■■■■□ 3.76
VEGFA-207ENST00000413642 WAPLQ7Z5K2 1190 aa38.56■■■■□ 3.76
VEGFA-207ENST00000413642 KDM2AQ9Y2K7 1162 aa38.55■■■■□ 3.76
VEGFA-207ENST00000413642 PHF23Q9BUL5 403 aaPredicted RBP38.54■■■■□ 3.76
VEGFA-207ENST00000413642 ABCC11Q96J66 1382 aa38.52■■■■□ 3.76
VEGFA-207ENST00000413642 DCAF11Q8TEB1 546 aa38.51■■■■□ 3.76
VEGFA-207ENST00000413642 COL16A1Q07092 1604 aaPredicted RBP38.51■■■■□ 3.76
VEGFA-207ENST00000413642 TECPR2O15040 1411 aa38.5■■■■□ 3.75
VEGFA-207ENST00000413642 YTHDC2Q9H6S0 1430 aaKnown RBP38.5■■■■□ 3.75
VEGFA-207ENST00000413642 PLEKHH1Q9ULM0 1364 aa38.5■■■■□ 3.75
VEGFA-207ENST00000413642 DDX17Q92841 729 aaKnown RBP38.49■■■■□ 3.75
VEGFA-207ENST00000413642 AHDC1Q5TGY3 1603 aaPredicted RBP38.49■■■■□ 3.75
VEGFA-207ENST00000413642 JCADQ9P266 1359 aa38.48■■■■□ 3.75
VEGFA-207ENST00000413642 C1orf167Q5SNV9 1468 aa38.47■■■■□ 3.75
VEGFA-207ENST00000413642 DHX57Q6P158 1386 aaKnown RBP38.46■■■■□ 3.75
VEGFA-207ENST00000413642 ORAI2Q96SN7 254 aa38.44■■■■□ 3.74
VEGFA-207ENST00000413642 RGS17Q9UGC6 210 aaPredicted RBP38.41■■■■□ 3.74
VEGFA-207ENST00000413642 SIRT1Q96EB6 747 aa38.36■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms