RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 MYOM2P54296 1465 aa25.45■■□□□ 1.67
CXXC1-202ENST00000412036 NRXN1Q9ULB1 1477 aa25.44■■□□□ 1.66
CXXC1-202ENST00000412036 NEXMIFQ5QGS0 1516 aa25.44■■□□□ 1.66
CXXC1-202ENST00000412036 SLC52A1Q9NWF4 448 aa25.44■■□□□ 1.66
CXXC1-202ENST00000412036 ST20-MTHFSA0A0A6YYL1 179 aa25.42■■□□□ 1.66
CXXC1-202ENST00000412036 CFAP70Q5T0N1 1121 aa25.42■■□□□ 1.66
CXXC1-202ENST00000412036 SENP3Q9H4L4 574 aaPredicted RBP25.42■■□□□ 1.66
CXXC1-202ENST00000412036 ESF1Q9H501 851 aaKnown RBP25.39■■□□□ 1.66
CXXC1-202ENST00000412036 FER1L4A9Z1Z3 1794 aa25.38■■□□□ 1.65
CXXC1-202ENST00000412036 KIF7Q2M1P5 1343 aa25.37■■□□□ 1.65
CXXC1-202ENST00000412036 LAMC1P11047 1609 aa25.37■■□□□ 1.65
CXXC1-202ENST00000412036 PIK3C2GO75747 1445 aa25.37■■□□□ 1.65
CXXC1-202ENST00000412036 C3P01024 1663 aa25.36■■□□□ 1.65
CXXC1-202ENST00000412036 CCDC7Q96M83 1385 aa25.36■■□□□ 1.65
CXXC1-202ENST00000412036 PLPPR3Q6T4P5 718 aa25.36■■□□□ 1.65
CXXC1-202ENST00000412036 A2ML1A8K2U0 1454 aa25.35■■□□□ 1.65
CXXC1-202ENST00000412036 IQGAP1P46940 1657 aa25.33■■□□□ 1.65
CXXC1-202ENST00000412036 STAC3Q96MF2 364 aa25.33■■□□□ 1.64
CXXC1-202ENST00000412036 KIAA1210Q9ULL0 1709 aa25.32■■□□□ 1.64
CXXC1-202ENST00000412036 RPGRIP1LQ68CZ1 1315 aa25.31■■□□□ 1.64
CXXC1-202ENST00000412036 TNRQ92752 1358 aa25.31■■□□□ 1.64
CXXC1-202ENST00000412036 TESK2Q96S53 571 aa25.3■■□□□ 1.64
CXXC1-202ENST00000412036 POLR1AO95602 1720 aaPredicted RBP25.3■■□□□ 1.64
CXXC1-202ENST00000412036 ADGRB1O14514 1584 aa25.28■■□□□ 1.64
CXXC1-202ENST00000412036 TMEM132EQ6IEE7 984 aa25.28■■□□□ 1.64
CXXC1-202ENST00000412036 C14orf93Q9H972 538 aaKnown RBP25.27■■□□□ 1.64
CXXC1-202ENST00000412036 STAG3Q9UJ98 1225 aa25.25■■□□□ 1.63
CXXC1-202ENST00000412036 SCAF11Q99590 1463 aaKnown RBP25.24■■□□□ 1.63
CXXC1-202ENST00000412036 RIMS1Q86UR5 1692 aaKnown RBP25.24■■□□□ 1.63
CXXC1-202ENST00000412036 DISP3Q9P2K9 1392 aa25.24■■□□□ 1.63
CXXC1-202ENST00000412036 ASXL1Q8IXJ9 1541 aa25.24■■□□□ 1.63
CXXC1-202ENST00000412036 ADAMTSL3P82987 1691 aa25.23■■□□□ 1.63
CXXC1-202ENST00000412036 ZFYVE9O95405 1425 aa25.23■■□□□ 1.63
CXXC1-202ENST00000412036 UBR1Q8IWV7 1749 aa25.23■■□□□ 1.63
CXXC1-202ENST00000412036 VGFO15240 615 aaPredicted RBP25.23■■□□□ 1.63
CXXC1-202ENST00000412036 POLR3GLQ9BT43 218 aa25.21■■□□□ 1.63
CXXC1-202ENST00000412036 RIMS2Q9UQ26 1411 aa25.21■■□□□ 1.63
CXXC1-202ENST00000412036 SETBP1Q9Y6X0 1596 aa25.2■■□□□ 1.62
CXXC1-202ENST00000412036 PTPRMP28827 1452 aa25.17■■□□□ 1.62
CXXC1-202ENST00000412036 TRAK1Q9UPV9 953 aa25.16■■□□□ 1.62
CXXC1-202ENST00000412036 NRXN3Q9Y4C0 1643 aa25.15■■□□□ 1.62
CXXC1-202ENST00000412036 ALKQ9UM73 1620 aa25.13■■□□□ 1.61
CXXC1-202ENST00000412036 NLRP1Q9C000 1473 aa25.12■■□□□ 1.61
CXXC1-202ENST00000412036 SETD1AO15047 1707 aaKnown RBP25.12■■□□□ 1.61
CXXC1-202ENST00000412036 TMEM2Q9UHN6 1383 aa25.12■■□□□ 1.61
CXXC1-202ENST00000412036 LTKP29376 864 aa25.11■■□□□ 1.61
CXXC1-202ENST00000412036 MYO3AQ8NEV4 1616 aa25.11■■□□□ 1.61
CXXC1-202ENST00000412036 KDM5AP29375 1690 aaKnown RBP25.11■■□□□ 1.61
CXXC1-202ENST00000412036 ARHGEF28Q8N1W1 1705 aaKnown RBP25.07■■□□□ 1.6
CXXC1-202ENST00000412036 STK26Q9P289 416 aa25.07■■□□□ 1.6
CXXC1-202ENST00000412036 METP08581 1390 aa25.03■■□□□ 1.6
CXXC1-202ENST00000412036 EIF3AQ14152 1382 aaKnown RBP25.03■■□□□ 1.6
CXXC1-202ENST00000412036 TMF1P82094 1093 aa25.03■■□□□ 1.6
CXXC1-202ENST00000412036 QRICH2Q9H0J4 1663 aa25.02■■□□□ 1.6
CXXC1-202ENST00000412036 CENPJQ9HC77 1338 aaPredicted RBP25.02■■□□□ 1.6
CXXC1-202ENST00000412036 YTHDC2Q9H6S0 1430 aaKnown RBP25.02■■□□□ 1.6
CXXC1-202ENST00000412036 ARHGAP23Q9P227 1491 aa25.01■■□□□ 1.59
CXXC1-202ENST00000412036 CEP170BQ9Y4F5 1589 aaPredicted RBP25.01■■□□□ 1.59
CXXC1-202ENST00000412036 SAFB2Q14151 953 aaKnown RBP eCLIP25■■□□□ 1.59
CXXC1-202ENST00000412036 SLIT1O75093 1534 aa25■■□□□ 1.59
CXXC1-202ENST00000412036 ADAMTS13Q76LX8 1427 aa24.99■■□□□ 1.59
CXXC1-202ENST00000412036 CNGB1Q14028 1251 aaPredicted RBP24.99■■□□□ 1.59
CXXC1-202ENST00000412036 ANP32CO43423 234 aa24.98■■□□□ 1.59
CXXC1-202ENST00000412036 MYOM1P52179 1685 aa24.97■■□□□ 1.59
CXXC1-202ENST00000412036 TXNDC2Q86VQ3 553 aa24.97■■□□□ 1.59
CXXC1-202ENST00000412036 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.97■■□□□ 1.59
CXXC1-202ENST00000412036 SBNO2Q9Y2G9 1366 aa24.96■■□□□ 1.59
CXXC1-202ENST00000412036 YTHDC1Q96MU7 727 aaKnown RBP24.95■■□□□ 1.58
CXXC1-202ENST00000412036 CCDC184Q52MB2 194 aa24.95■■□□□ 1.58
CXXC1-202ENST00000412036 PLEKHH1Q9ULM0 1364 aa24.94■■□□□ 1.58
CXXC1-202ENST00000412036 TULP4Q9NRJ4 1543 aa24.94■■□□□ 1.58
CXXC1-202ENST00000412036 PER1O15534 1290 aaPredicted RBP24.93■■□□□ 1.58
CXXC1-202ENST00000412036 PRAM1Q96QH2 718 aa24.93■■□□□ 1.58
CXXC1-202ENST00000412036 PRKRIP1Q9H875 184 aaPredicted RBP24.93■■□□□ 1.58
CXXC1-202ENST00000412036 PLEKHG1Q9ULL1 1385 aa24.92■■□□□ 1.58
CXXC1-202ENST00000412036 SLC26A8Q96RN1 970 aa24.92■■□□□ 1.58
CXXC1-202ENST00000412036 WAPLQ7Z5K2 1190 aa24.92■■□□□ 1.58
CXXC1-202ENST00000412036 PANK3Q9H999 370 aa24.92■■□□□ 1.58
CXXC1-202ENST00000412036 MED14O60244 1454 aa24.91■■□□□ 1.58
CXXC1-202ENST00000412036 ZNF142P52746 1687 aaPredicted RBP24.91■■□□□ 1.58
CXXC1-202ENST00000412036 THEMISQ8N1K5 641 aaPredicted RBP24.91■■□□□ 1.58
CXXC1-202ENST00000412036 LRPPRCP42704 1394 aaKnown RBP24.9■■□□□ 1.58
CXXC1-202ENST00000412036 BCANQ96GW7 911 aa24.89■■□□□ 1.58
CXXC1-202ENST00000412036 SETD1BQ9UPS6 1966 aaKnown RBP24.89■■□□□ 1.58
CXXC1-202ENST00000412036 PTPRUQ92729 1446 aa24.88■■□□□ 1.57
CXXC1-202ENST00000412036 MINK1Q8N4C8 1332 aaPredicted RBP24.87■■□□□ 1.57
CXXC1-202ENST00000412036 HDGFP51858 240 aaKnown RBP24.86■■□□□ 1.57
CXXC1-202ENST00000412036 KDM4FA0A1W2PPD8 638 aa24.86■■□□□ 1.57
CXXC1-202ENST00000412036 ABCC11Q96J66 1382 aa24.85■■□□□ 1.57
CXXC1-202ENST00000412036 EID1Q9Y6B2 187 aa24.84■■□□□ 1.57
CXXC1-202ENST00000412036 DLC1Q96QB1 1528 aa24.83■■□□□ 1.57
CXXC1-202ENST00000412036 CABP2Q9NPB3 220 aa24.83■■□□□ 1.57
CXXC1-202ENST00000412036 ROBO2Q9HCK4 1378 aa24.82■■□□□ 1.56
CXXC1-202ENST00000412036 CCER2I3L3R5 266 aa24.82■■□□□ 1.56
CXXC1-202ENST00000412036 POGKQ9P215 609 aa24.81■■□□□ 1.56
CXXC1-202ENST00000412036 CARD14Q9BXL6 1004 aa24.8■■□□□ 1.56
CXXC1-202ENST00000412036 SLC12A5Q9H2X9 1139 aa24.8■■□□□ 1.56
CXXC1-202ENST00000412036 TECPR2O15040 1411 aa24.8■■□□□ 1.56
CXXC1-202ENST00000412036 CDCA8Q53HL2 280 aa24.79■■□□□ 1.56
CXXC1-202ENST00000412036 KNDC1Q76NI1 1749 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms