RNA–Protein interactions for RNA: ENST00000410017.5

COPS7B-206, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-206ENST00000410017 ABCA8O94911 1581 aa21.32■■□□□ 1
COPS7B-206ENST00000410017 SHROOM2Q13796 1616 aa21.32■■□□□ 1
COPS7B-206ENST00000410017 RGS3P49796 1198 aa21.31■■□□□ 1
COPS7B-206ENST00000410017 WDR7Q9Y4E6 1490 aa21.31■■□□□ 1
COPS7B-206ENST00000410017 UNC13BO14795 1591 aa21.3■■□□□ 1
COPS7B-206ENST00000410017 PIK3C2GO75747 1445 aa21.3■■□□□ 1
COPS7B-206ENST00000410017 USP19O94966 1318 aa21.3■■□□□ 1
COPS7B-206ENST00000410017 HNRNPMP52272 730 aaKnown RBP eCLIP21.3■■□□□ 14e-7■■■■□ 19.8
COPS7B-206ENST00000410017 KNSTRNQ9Y448 316 aa21.3■■□□□ 1
COPS7B-206ENST00000410017 ATP10AO60312 1499 aa21.3■■□□□ 1
COPS7B-206ENST00000410017 RGL3Q3MIN7 710 aa21.3■■□□□ 1
COPS7B-206ENST00000410017 ATP10BO94823 1461 aa21.29■■□□□ 1
COPS7B-206ENST00000410017 MAGI2Q86UL8 1455 aa21.29■■□□□ 1
COPS7B-206ENST00000410017 VIRMAQ69YN4 1812 aaKnown RBP21.29■■□□□ 1
COPS7B-206ENST00000410017 BECN1Q14457 450 aa21.28■■□□□ 1
COPS7B-206ENST00000410017 NGEFQ8N5V2 710 aa21.28■■□□□ 1
COPS7B-206ENST00000410017 NKTRP30414 1462 aaKnown RBP21.28■■□□□ 1
COPS7B-206ENST00000410017 NPC1L1Q9UHC9 1359 aa21.28■■□□□ 1
COPS7B-206ENST00000410017 AMER1Q5JTC6 1135 aaPredicted RBP21.28■■□□□ 1
COPS7B-206ENST00000410017 MAPK8IP3Q9UPT6 1336 aa21.27■■□□□ 1
COPS7B-206ENST00000410017 RNF17Q9BXT8 1623 aaKnown RBP21.27■■□□□ 1
COPS7B-206ENST00000410017 NINLQ9Y2I6 1382 aa21.26■□□□□ 0.99
COPS7B-206ENST00000410017 EIF5BO60841 1220 aaKnown RBP21.26■□□□□ 0.99
COPS7B-206ENST00000410017 L1TD1Q5T7N2 865 aaKnown RBP21.26■□□□□ 0.99
COPS7B-206ENST00000410017 ABCC2Q92887 1545 aa21.26■□□□□ 0.99
COPS7B-206ENST00000410017 CDCA8Q53HL2 280 aa21.25■□□□□ 0.99
COPS7B-206ENST00000410017 CGNL1Q0VF96 1302 aa21.25■□□□□ 0.99
COPS7B-206ENST00000410017 PDE3AQ14432 1141 aa21.25■□□□□ 0.99
COPS7B-206ENST00000410017 CYB5RLQ6IPT4 315 aa21.25■□□□□ 0.99
COPS7B-206ENST00000410017 MYO5CQ9NQX4 1742 aa21.25■□□□□ 0.99
COPS7B-206ENST00000410017 MAST1Q9Y2H9 1570 aa21.24■□□□□ 0.99
COPS7B-206ENST00000410017 E9PSI1 815 aa21.24■□□□□ 0.99
COPS7B-206ENST00000410017 SYNMO15061 1565 aa21.23■□□□□ 0.99
COPS7B-206ENST00000410017 ZMYM3Q14202 1370 aa21.23■□□□□ 0.99
COPS7B-206ENST00000410017 IQGAP3Q86VI3 1631 aa21.23■□□□□ 0.99
COPS7B-206ENST00000410017 ASXL1Q8IXJ9 1541 aa21.22■□□□□ 0.99
COPS7B-206ENST00000410017 SAMD9LQ8IVG5 1584 aa21.21■□□□□ 0.99
COPS7B-206ENST00000410017 IGHDP01880 384 aa21.21■□□□□ 0.99
COPS7B-206ENST00000410017 AAMPQ13685 434 aa21.2■□□□□ 0.99
COPS7B-206ENST00000410017 POGKQ9P215 609 aa21.19■□□□□ 0.98
COPS7B-206ENST00000410017 ANTXR1Q9H6X2 564 aa21.18■□□□□ 0.98
COPS7B-206ENST00000410017 BCAR3O75815 825 aa21.17■□□□□ 0.98
COPS7B-206ENST00000410017 PREX2Q70Z35 1606 aa21.17■□□□□ 0.98
COPS7B-206ENST00000410017 STAC3Q96MF2 364 aa21.17■□□□□ 0.98
COPS7B-206ENST00000410017 NLRP1Q9C000 1473 aa21.17■□□□□ 0.98
COPS7B-206ENST00000410017 IQGAP1P46940 1657 aa21.16■□□□□ 0.98
COPS7B-206ENST00000410017 CLUAP1Q96AJ1 413 aa21.16■□□□□ 0.98
COPS7B-206ENST00000410017 SPINK5Q9NQ38 1064 aaPredicted RBP21.16■□□□□ 0.98
COPS7B-206ENST00000410017 PLXNC1O60486 1568 aa21.16■□□□□ 0.98
COPS7B-206ENST00000410017 CDC42BPBQ9Y5S2 1711 aa21.15■□□□□ 0.98
COPS7B-206ENST00000410017 SEC24BO95487 1268 aa21.14■□□□□ 0.98
COPS7B-206ENST00000410017 APAF1O14727 1248 aa21.14■□□□□ 0.97
COPS7B-206ENST00000410017 SCAPERQ9BY12 1400 aa21.13■□□□□ 0.97
COPS7B-206ENST00000410017 SCAF11Q99590 1463 aaKnown RBP21.11■□□□□ 0.97
COPS7B-206ENST00000410017 PMFBP1Q8TBY8 1022 aa21.11■□□□□ 0.97
COPS7B-206ENST00000410017 UPF2Q9HAU5 1272 aaKnown RBP21.11■□□□□ 0.97
COPS7B-206ENST00000410017 RRAGDQ9NQL2 400 aaPredicted RBP21.11■□□□□ 0.97
COPS7B-206ENST00000410017 CCDC146Q8IYE0 955 aa21.11■□□□□ 0.97
COPS7B-206ENST00000410017 MADDQ8WXG6 1647 aa21.1■□□□□ 0.97
COPS7B-206ENST00000410017 TBC1D32Q96NH3 1257 aa21.1■□□□□ 0.97
COPS7B-206ENST00000410017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.1■□□□□ 0.976e-8■■□□□ 11.8
COPS7B-206ENST00000410017 CENPJQ9HC77 1338 aaPredicted RBP21.1■□□□□ 0.97
COPS7B-206ENST00000410017 DUOX2Q9NRD8 1548 aa21.09■□□□□ 0.97
COPS7B-206ENST00000410017 SLC24A1O60721 1099 aa21.09■□□□□ 0.97
COPS7B-206ENST00000410017 FSD2A1L4K1 749 aa21.08■□□□□ 0.96
COPS7B-206ENST00000410017 SLKQ9H2G2 1235 aaPredicted RBP21.07■□□□□ 0.96
COPS7B-206ENST00000410017 SYCP2Q9BX26 1530 aa21.07■□□□□ 0.96
COPS7B-206ENST00000410017 MYOM1P52179 1685 aa21.06■□□□□ 0.96
COPS7B-206ENST00000410017 TBC1D2Q9BYX2 928 aa21.05■□□□□ 0.96
COPS7B-206ENST00000410017 GOLGA6L3A6NEY3 463 aa21.05■□□□□ 0.96
COPS7B-206ENST00000410017 COG6Q9Y2V7 657 aa21.05■□□□□ 0.96
COPS7B-206ENST00000410017 XRCC6P12956 609 aaKnown RBP eCLIP21.03■□□□□ 0.96
COPS7B-206ENST00000410017 CANXP27824 592 aaKnown RBP21.03■□□□□ 0.96
COPS7B-206ENST00000410017 WWC1Q8IX03 1113 aa21.03■□□□□ 0.96
COPS7B-206ENST00000410017 PANK1Q8TE04 598 aa21.03■□□□□ 0.96
COPS7B-206ENST00000410017 DMRT2Q9Y5R5 561 aa21.02■□□□□ 0.96
COPS7B-206ENST00000410017 POLR3AO14802 1390 aaPredicted RBP21.02■□□□□ 0.96
COPS7B-206ENST00000410017 MCM4P33991 863 aa21.01■□□□□ 0.95
COPS7B-206ENST00000410017 CLCN1P35523 988 aa21.01■□□□□ 0.95
COPS7B-206ENST00000410017 TTC37Q6PGP7 1564 aa21■□□□□ 0.95
COPS7B-206ENST00000410017 SPHKAPQ2M3C7 1700 aa21■□□□□ 0.95
COPS7B-206ENST00000410017 KDM5AP29375 1690 aaKnown RBP21■□□□□ 0.95
COPS7B-206ENST00000410017 RWDD1Q9H446 243 aaPredicted RBP20.99■□□□□ 0.95
COPS7B-206ENST00000410017 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
COPS7B-206ENST00000410017 RARSP54136 660 aaKnown RBP20.98■□□□□ 0.95
COPS7B-206ENST00000410017 PDZRN3Q9UPQ7 1066 aa20.98■□□□□ 0.95
COPS7B-206ENST00000410017 KIAA1210Q9ULL0 1709 aa20.97■□□□□ 0.95
COPS7B-206ENST00000410017 CHMP5Q9NZZ3 219 aa20.97■□□□□ 0.95
COPS7B-206ENST00000410017 ISY1Q9ULR0 285 aaKnown RBP20.97■□□□□ 0.95
COPS7B-206ENST00000410017 PCDHB15Q9Y5E8 787 aa20.97■□□□□ 0.95
COPS7B-206ENST00000410017 TRPM2O94759 1503 aa20.96■□□□□ 0.95
COPS7B-206ENST00000410017 GLIPR1L2Q4G1C9 344 aa20.96■□□□□ 0.95
COPS7B-206ENST00000410017 NCBP3Q53F19 620 aaKnown RBP20.95■□□□□ 0.94
COPS7B-206ENST00000410017 WDR63Q8IWG1 891 aa20.95■□□□□ 0.94
COPS7B-206ENST00000410017 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
COPS7B-206ENST00000410017 MRE11P49959 708 aa20.95■□□□□ 0.94
COPS7B-206ENST00000410017 PTPRTO14522 1441 aa20.95■□□□□ 0.94
COPS7B-206ENST00000410017 PNNQ9H307 717 aaKnown RBP20.94■□□□□ 0.94
COPS7B-206ENST00000410017 KANK1Q14678 1352 aa20.94■□□□□ 0.94
COPS7B-206ENST00000410017 CEP152O94986 1710 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms