RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 SPAG9O60271 1321 aaKnown RBP20.03■□□□□ 0.8
LYSMD4-204ENST00000409796 CLTCL1P53675 1640 aa20.03■□□□□ 0.8
LYSMD4-204ENST00000409796 NPM2Q86SE8 214 aaKnown RBP20.02■□□□□ 0.8
LYSMD4-204ENST00000409796 AMER1Q5JTC6 1135 aaPredicted RBP20.02■□□□□ 0.8
LYSMD4-204ENST00000409796 SYNMO15061 1565 aa20.01■□□□□ 0.79
LYSMD4-204ENST00000409796 MS4A1P11836 297 aa20.01■□□□□ 0.79
LYSMD4-204ENST00000409796 SCAF11Q99590 1463 aaKnown RBP20.01■□□□□ 0.79
LYSMD4-204ENST00000409796 AFAP1Q8N556 730 aa20.01■□□□□ 0.79
LYSMD4-204ENST00000409796 BACH2Q9BYV9 841 aa20.01■□□□□ 0.79
LYSMD4-204ENST00000409796 ZFYVE16Q7Z3T8 1539 aa20.01■□□□□ 0.79
LYSMD4-204ENST00000409796 UHRF1BP1LA0JNW5 1464 aa20.01■□□□□ 0.79
LYSMD4-204ENST00000409796 PTPRTO14522 1441 aa20■□□□□ 0.79
LYSMD4-204ENST00000409796 PLEKHH1Q9ULM0 1364 aa19.99■□□□□ 0.79
LYSMD4-204ENST00000409796 RTEL1-TNFRSF6BF6WH68 1400 aa19.99■□□□□ 0.79
LYSMD4-204ENST00000409796 SCAPERQ9BY12 1400 aa19.99■□□□□ 0.79
LYSMD4-204ENST00000409796 MYOM1P52179 1685 aa19.99■□□□□ 0.79
LYSMD4-204ENST00000409796 WDR43Q15061 677 aaKnown RBP eCLIP19.99■□□□□ 0.79
LYSMD4-204ENST00000409796 DEPDC5O75140 1603 aa19.99■□□□□ 0.79
LYSMD4-204ENST00000409796 C20orf194Q5TEA3 1177 aa19.98■□□□□ 0.79
LYSMD4-204ENST00000409796 TET3O43151 1660 aa19.97■□□□□ 0.79
LYSMD4-204ENST00000409796 CDCA8Q53HL2 280 aa19.97■□□□□ 0.79
LYSMD4-204ENST00000409796 ASXL1Q8IXJ9 1541 aa19.97■□□□□ 0.79
LYSMD4-204ENST00000409796 SKAP1Q86WV1 359 aa19.97■□□□□ 0.79
LYSMD4-204ENST00000409796 DUSP27Q5VZP5 1158 aa19.95■□□□□ 0.78
LYSMD4-204ENST00000409796 STAC3Q96MF2 364 aa19.95■□□□□ 0.78
LYSMD4-204ENST00000409796 ZNF521Q96K83 1311 aa19.94■□□□□ 0.78
LYSMD4-204ENST00000409796 ARAP3Q8WWN8 1544 aa19.94■□□□□ 0.78
LYSMD4-204ENST00000409796 PIK3C2GO75747 1445 aa19.93■□□□□ 0.78
LYSMD4-204ENST00000409796 KIAA1210Q9ULL0 1709 aa19.93■□□□□ 0.78
LYSMD4-204ENST00000409796 KDM5AP29375 1690 aaKnown RBP19.92■□□□□ 0.78
LYSMD4-204ENST00000409796 VWDEQ8N2E2 1590 aa19.91■□□□□ 0.78
LYSMD4-204ENST00000409796 GOLGA2Q08379 1002 aa19.91■□□□□ 0.78
LYSMD4-204ENST00000409796 EIF3AQ14152 1382 aaKnown RBP19.91■□□□□ 0.78
LYSMD4-204ENST00000409796 ATP7AQ04656 1500 aa19.91■□□□□ 0.78
LYSMD4-204ENST00000409796 INO80Q9ULG1 1556 aaPredicted RBP19.9■□□□□ 0.78
LYSMD4-204ENST00000409796 KANK1Q14678 1352 aa19.9■□□□□ 0.78
LYSMD4-204ENST00000409796 NPC1L1Q9UHC9 1359 aa19.9■□□□□ 0.78
LYSMD4-204ENST00000409796 RTL5Q5HYW3 569 aaPredicted RBP19.89■□□□□ 0.78
LYSMD4-204ENST00000409796 KDM2BQ8NHM5 1336 aa19.89■□□□□ 0.77
LYSMD4-204ENST00000409796 KIF3BO15066 747 aa19.88■□□□□ 0.77
LYSMD4-204ENST00000409796 CCDC146Q8IYE0 955 aa19.88■□□□□ 0.77
LYSMD4-204ENST00000409796 ABCA6Q8N139 1617 aa19.87■□□□□ 0.77
LYSMD4-204ENST00000409796 UGGT1Q9NYU2 1555 aa19.87■□□□□ 0.77
LYSMD4-204ENST00000409796 SLFN5Q08AF3 891 aa19.87■□□□□ 0.77
LYSMD4-204ENST00000409796 CFAP70Q5T0N1 1121 aa19.87■□□□□ 0.77
LYSMD4-204ENST00000409796 ABCA9Q8IUA7 1624 aa19.87■□□□□ 0.77
LYSMD4-204ENST00000409796 MAP3K4Q9Y6R4 1608 aa19.87■□□□□ 0.77
LYSMD4-204ENST00000409796 FANCAO15360 1455 aa19.85■□□□□ 0.77
LYSMD4-204ENST00000409796 NEURL4Q96JN8 1562 aa19.85■□□□□ 0.77
LYSMD4-204ENST00000409796 ERVK-7P63135 1459 aa19.85■□□□□ 0.77
LYSMD4-204ENST00000409796 MROH1Q8NDA8 1641 aa19.85■□□□□ 0.77
LYSMD4-204ENST00000409796 KIF1BO60333 1816 aa19.84■□□□□ 0.77
LYSMD4-204ENST00000409796 ADGRF5Q8IZF2 1346 aa19.84■□□□□ 0.77
LYSMD4-204ENST00000409796 CENPQQ7L2Z9 268 aaPredicted RBP19.83■□□□□ 0.77
LYSMD4-204ENST00000409796 LAS1LQ9Y4W2 734 aaKnown RBP19.83■□□□□ 0.77
LYSMD4-204ENST00000409796 MYOM2P54296 1465 aa19.83■□□□□ 0.76
LYSMD4-204ENST00000409796 TRMT2AQ8IZ69 625 aaKnown RBP19.83■□□□□ 0.76
LYSMD4-204ENST00000409796 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.83■□□□□ 0.76
LYSMD4-204ENST00000409796 APAF1O14727 1248 aa19.82■□□□□ 0.76
LYSMD4-204ENST00000409796 SPINK5Q9NQ38 1064 aaPredicted RBP19.82■□□□□ 0.76
LYSMD4-204ENST00000409796 IFT172Q9UG01 1749 aa19.82■□□□□ 0.76
LYSMD4-204ENST00000409796 IL27Q8NEV9 243 aa19.8■□□□□ 0.76
LYSMD4-204ENST00000409796 CARD14Q9BXL6 1004 aa19.8■□□□□ 0.76
LYSMD4-204ENST00000409796 MROH2AA6NES4 1674 aa19.8■□□□□ 0.76
LYSMD4-204ENST00000409796 ADGRL1O94910 1474 aa19.8■□□□□ 0.76
LYSMD4-204ENST00000409796 EFCAB6Q5THR3 1501 aa19.78■□□□□ 0.76
LYSMD4-204ENST00000409796 NKTRP30414 1462 aaKnown RBP19.78■□□□□ 0.76
LYSMD4-204ENST00000409796 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
LYSMD4-204ENST00000409796 DDRGK1Q96HY6 314 aa19.77■□□□□ 0.75
LYSMD4-204ENST00000409796 PPRC1Q5VV67 1664 aaKnown RBP19.76■□□□□ 0.75
LYSMD4-204ENST00000409796 MYO3AQ8NEV4 1616 aa19.76■□□□□ 0.75
LYSMD4-204ENST00000409796 BCAR3O75815 825 aa19.75■□□□□ 0.75
LYSMD4-204ENST00000409796 NEFMP07197 916 aa19.75■□□□□ 0.75
LYSMD4-204ENST00000409796 DMRT2Q9Y5R5 561 aa19.75■□□□□ 0.75
LYSMD4-204ENST00000409796 AEBP2Q6ZN18 517 aaPredicted RBP19.74■□□□□ 0.75
LYSMD4-204ENST00000409796 KIDINS220Q9ULH0 1771 aa19.74■□□□□ 0.75
LYSMD4-204ENST00000409796 E9PSI1 815 aa19.74■□□□□ 0.75
LYSMD4-204ENST00000409796 NRXN1Q9ULB1 1477 aa19.74■□□□□ 0.75
LYSMD4-204ENST00000409796 PPM1GO15355 546 aaPredicted RBP19.72■□□□□ 0.75
LYSMD4-204ENST00000409796 FAM161AQ3B820 660 aa19.72■□□□□ 0.75
LYSMD4-204ENST00000409796 C8orf34Q49A92 452 aa19.72■□□□□ 0.75
LYSMD4-204ENST00000409796 SBNO2Q9Y2G9 1366 aa19.71■□□□□ 0.75
LYSMD4-204ENST00000409796 NOS1P29475 1434 aa19.71■□□□□ 0.75
LYSMD4-204ENST00000409796 RTN4Q9NQC3 1192 aaKnown RBP19.71■□□□□ 0.75
LYSMD4-204ENST00000409796 USP35Q9P2H5 1018 aa19.71■□□□□ 0.75
LYSMD4-204ENST00000409796 CFAP65Q6ZU64 1925 aaKnown RBP19.7■□□□□ 0.74
LYSMD4-204ENST00000409796 CENPJQ9HC77 1338 aaPredicted RBP19.7■□□□□ 0.74
LYSMD4-204ENST00000409796 POLR3AO14802 1390 aaPredicted RBP19.7■□□□□ 0.74
LYSMD4-204ENST00000409796 RGS3P49796 1198 aa19.69■□□□□ 0.74
LYSMD4-204ENST00000409796 ADGRB3O60242 1522 aa19.69■□□□□ 0.74
LYSMD4-204ENST00000409796 LMTK2Q8IWU2 1503 aa19.69■□□□□ 0.74
LYSMD4-204ENST00000409796 NGEFQ8N5V2 710 aa19.69■□□□□ 0.74
LYSMD4-204ENST00000409796 SETBP1Q9Y6X0 1596 aa19.68■□□□□ 0.74
LYSMD4-204ENST00000409796 CHGAP10645 457 aaKnown RBP19.68■□□□□ 0.74
LYSMD4-204ENST00000409796 SHPRHQ149N8 1683 aa19.68■□□□□ 0.74
LYSMD4-204ENST00000409796 ZC3H13Q5T200 1668 aaKnown RBP19.68■□□□□ 0.74
LYSMD4-204ENST00000409796 NSD3Q9BZ95 1437 aa19.67■□□□□ 0.74
LYSMD4-204ENST00000409796 SLC4A3P48751 1232 aa19.67■□□□□ 0.74
LYSMD4-204ENST00000409796 ASXL2Q76L83 1435 aa19.67■□□□□ 0.74
LYSMD4-204ENST00000409796 TRAK1Q9UPV9 953 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms