RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 TOMM22Q9NS69 142 aa15.78■□□□□ 0.12
RNF43-201ENST00000407977 CDR1P51861 262 aa15.78■□□□□ 0.12
RNF43-201ENST00000407977 HMGN5P82970 282 aaKnown RBP15.78■□□□□ 0.12
RNF43-201ENST00000407977 BICD2Q8TD16 824 aa15.78■□□□□ 0.12
RNF43-201ENST00000407977 AMPHP49418 695 aa15.78■□□□□ 0.12
RNF43-201ENST00000407977 CCDC47Q96A33 483 aaKnown RBP15.78■□□□□ 0.12
RNF43-201ENST00000407977 LETM1O95202 739 aaPredicted RBP15.77■□□□□ 0.12
RNF43-201ENST00000407977 MNS1Q8NEH6 495 aa15.77■□□□□ 0.12
RNF43-201ENST00000407977 CCDC66A2RUB6 948 aa15.77■□□□□ 0.11
RNF43-201ENST00000407977 MARCH6O60337 910 aa15.77■□□□□ 0.11
RNF43-201ENST00000407977 TRIM29Q14134 588 aa15.77■□□□□ 0.11
RNF43-201ENST00000407977 KIF3BO15066 747 aa15.77■□□□□ 0.11
RNF43-201ENST00000407977 MCTP1Q6DN14 999 aa15.77■□□□□ 0.11
RNF43-201ENST00000407977 MBD3O95983 291 aa15.76■□□□□ 0.11
RNF43-201ENST00000407977 ZNF330Q9Y3S2 320 aaPredicted RBP15.76■□□□□ 0.11
RNF43-201ENST00000407977 SMC3Q9UQE7 1217 aa15.76■□□□□ 0.11
RNF43-201ENST00000407977 HSP90B2PQ58FF3 399 aa15.76■□□□□ 0.11
RNF43-201ENST00000407977 FOXD4L6Q3SYB3 417 aaPredicted RBP15.75■□□□□ 0.11
RNF43-201ENST00000407977 FOXD4L3Q6VB84 417 aaPredicted RBP15.75■□□□□ 0.11
RNF43-201ENST00000407977 IFT57Q9NWB7 429 aa15.75■□□□□ 0.11
RNF43-201ENST00000407977 CWC15Q9P013 229 aaKnown RBP15.75■□□□□ 0.11
RNF43-201ENST00000407977 AK7Q96M32 723 aa15.75■□□□□ 0.11
RNF43-201ENST00000407977 TMX4Q9H1E5 349 aaPredicted RBP15.75■□□□□ 0.11
RNF43-201ENST00000407977 EVC2Q86UK5 1308 aa15.75■□□□□ 0.11
RNF43-201ENST00000407977 MROH2BQ7Z745 1585 aa15.74■□□□□ 0.11
RNF43-201ENST00000407977 CCDC73Q6ZRK6 1079 aa15.74■□□□□ 0.11
RNF43-201ENST00000407977 STAC3Q96MF2 364 aa15.74■□□□□ 0.11
RNF43-201ENST00000407977 R3HCC1Q9Y3T6 440 aaKnown RBP15.74■□□□□ 0.11
RNF43-201ENST00000407977 MLECQ14165 292 aa15.73■□□□□ 0.11
RNF43-201ENST00000407977 HSP90AB4PQ58FF6 505 aa15.73■□□□□ 0.11
RNF43-201ENST00000407977 CCDC7Q96M83 1385 aa15.73■□□□□ 0.11
RNF43-201ENST00000407977 TRAK2O60296 914 aa15.73■□□□□ 0.11
RNF43-201ENST00000407977 FHOD3Q2V2M9 1422 aa15.73■□□□□ 0.11
RNF43-201ENST00000407977 ANO2Q9NQ90 1003 aa15.73■□□□□ 0.11
RNF43-201ENST00000407977 CNTLNQ9NXG0 1405 aa15.73■□□□□ 0.11
RNF43-201ENST00000407977 SMARCA2P51531 1590 aa15.73■□□□□ 0.11
RNF43-201ENST00000407977 CCDC173Q0VFZ6 552 aa15.73■□□□□ 0.11
RNF43-201ENST00000407977 NAT10Q9H0A0 1025 aaKnown RBP15.73■□□□□ 0.11
RNF43-201ENST00000407977 RUNDC1Q96C34 613 aa15.73■□□□□ 0.11
RNF43-201ENST00000407977 CPLX1O14810 134 aa15.72■□□□□ 0.11
RNF43-201ENST00000407977 NGDNQ8NEJ9 315 aaKnown RBP15.72■□□□□ 0.11
RNF43-201ENST00000407977 CDC45O75419 566 aa15.72■□□□□ 0.11
RNF43-201ENST00000407977 RUFY1Q96T51 708 aa15.72■□□□□ 0.11
RNF43-201ENST00000407977 BRD4O60885 1362 aaPredicted RBP15.72■□□□□ 0.11
RNF43-201ENST00000407977 HNRNPMP52272 730 aaKnown RBP eCLIP15.71■□□□□ 0.112e-6■■■□□ 19.1
RNF43-201ENST00000407977 ELL2O00472 640 aaPredicted RBP15.71■□□□□ 0.11
RNF43-201ENST00000407977 ERCC4Q92889 916 aaPredicted RBP15.71■□□□□ 0.11
RNF43-201ENST00000407977 TRAK1Q9UPV9 953 aa15.71■□□□□ 0.11
RNF43-201ENST00000407977 MCM2P49736 904 aa15.71■□□□□ 0.1
RNF43-201ENST00000407977 NEXNQ0ZGT2 675 aa15.71■□□□□ 0.1
RNF43-201ENST00000407977 COG3Q96JB2 828 aa15.71■□□□□ 0.1
RNF43-201ENST00000407977 IFIT2P09913 472 aaKnown RBP15.7■□□□□ 0.1
RNF43-201ENST00000407977 NCBP3Q53F19 620 aaKnown RBP15.7■□□□□ 0.1
RNF43-201ENST00000407977 DHX8Q14562 1220 aaKnown RBP15.7■□□□□ 0.1
RNF43-201ENST00000407977 VPS37CA5D8V6 355 aaPredicted RBP15.7■□□□□ 0.1
RNF43-201ENST00000407977 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.69■□□□□ 0.14e-7■■□□□ 13.6
RNF43-201ENST00000407977 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.69■□□□□ 0.1
RNF43-201ENST00000407977 CALRP27797 417 aaKnown RBP15.69■□□□□ 0.1
RNF43-201ENST00000407977 ERC2O15083 957 aa15.69■□□□□ 0.1
RNF43-201ENST00000407977 CCP110O43303 1012 aa15.69■□□□□ 0.1
RNF43-201ENST00000407977 DIAPH1O60610 1272 aaKnown RBP15.69■□□□□ 0.1
RNF43-201ENST00000407977 VGFO15240 615 aaPredicted RBP15.68■□□□□ 0.1
RNF43-201ENST00000407977 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
RNF43-201ENST00000407977 MIA2Q96PC5 1412 aa15.68■□□□□ 0.1
RNF43-201ENST00000407977 PDS5BQ9NTI5 1447 aa15.68■□□□□ 0.1
RNF43-201ENST00000407977 GNAI1P63096 354 aa15.68■□□□□ 0.1
RNF43-201ENST00000407977 PCMTD1Q96MG8 357 aaPredicted RBP15.68■□□□□ 0.1
RNF43-201ENST00000407977 TRDNQ13061 729 aa15.67■□□□□ 0.1
RNF43-201ENST00000407977 WASHC2CQ9Y4E1 1318 aa15.67■□□□□ 0.1
RNF43-201ENST00000407977 FRAT2O75474 233 aaPredicted RBP15.67■□□□□ 0.1
RNF43-201ENST00000407977 C9orf78Q9NZ63 289 aaPredicted RBP15.67■□□□□ 0.1
RNF43-201ENST00000407977 EID1Q9Y6B2 187 aa15.67■□□□□ 0.1
RNF43-201ENST00000407977 PDE4CQ08493 712 aa15.67■□□□□ 0.1
RNF43-201ENST00000407977 RIPK4P57078 832 aa15.66■□□□□ 0.1
RNF43-201ENST00000407977 KIF7Q2M1P5 1343 aa15.66■□□□□ 0.1
RNF43-201ENST00000407977 LNPKQ9C0E8 428 aa15.66■□□□□ 0.1
RNF43-201ENST00000407977 TEFQ10587 303 aa15.65■□□□□ 0.1
RNF43-201ENST00000407977 RRP12Q5JTH9 1297 aaKnown RBP15.65■□□□□ 0.1
RNF43-201ENST00000407977 DDX58O95786 925 aaKnown RBP15.64■□□□□ 0.09
RNF43-201ENST00000407977 RABEP1Q15276 862 aa15.64■□□□□ 0.09
RNF43-201ENST00000407977 SAFBQ15424 915 aaKnown RBP eCLIP15.64■□□□□ 0.09
RNF43-201ENST00000407977 DCTN1Q14203 1278 aa15.64■□□□□ 0.09
RNF43-201ENST00000407977 C1orf141Q5JVX7 400 aa15.64■□□□□ 0.09
RNF43-201ENST00000407977 TSPY26PQ9H489 355 aa15.64■□□□□ 0.09
RNF43-201ENST00000407977 TDRD9Q8NDG6 1382 aaKnown RBP15.64■□□□□ 0.09
RNF43-201ENST00000407977 PDCP20941 246 aa15.63■□□□□ 0.09
RNF43-201ENST00000407977 PSMA5P28066 241 aa15.63■□□□□ 0.09
RNF43-201ENST00000407977 G3BP1Q13283 466 aaKnown RBP eCLIP15.63■□□□□ 0.09
RNF43-201ENST00000407977 OLFM4Q6UX06 510 aa15.63■□□□□ 0.09
RNF43-201ENST00000407977 PKNOX2Q96KN3 472 aa15.63■□□□□ 0.09
RNF43-201ENST00000407977 PDE3AQ14432 1141 aa15.63■□□□□ 0.09
RNF43-201ENST00000407977 CWC22Q9HCG8 908 aaKnown RBP15.62■□□□□ 0.09
RNF43-201ENST00000407977 BRPF3Q9ULD4 1205 aa15.62■□□□□ 0.09
RNF43-201ENST00000407977 AMOTL1Q8IY63 956 aa15.62■□□□□ 0.09
RNF43-201ENST00000407977 VPS53Q5VIR6 699 aa15.62■□□□□ 0.09
RNF43-201ENST00000407977 RRP9O43818 475 aaKnown RBP15.62■□□□□ 0.09
RNF43-201ENST00000407977 CAVIN1Q6NZI2 390 aaKnown RBP15.62■□□□□ 0.09
RNF43-201ENST00000407977 WASHC2AQ641Q2 1341 aa15.62■□□□□ 0.09
RNF43-201ENST00000407977 NINLQ9Y2I6 1382 aa15.61■□□□□ 0.09
RNF43-201ENST00000407977 TRIM5Q9C035 493 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms