RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 UBAP1LF5GYI3 381 aa39.48■■■■□ 3.91
HDAC11-206ENST00000405025 LRRC7Q96NW7 1537 aa39.48■■■■□ 3.91
HDAC11-206ENST00000405025 SLC26A8Q96RN1 970 aa39.47■■■■□ 3.91
HDAC11-206ENST00000405025 PLEKHG1Q9ULL1 1385 aa39.44■■■■□ 3.9
HDAC11-206ENST00000405025 NUTM2DQ5VT03 806 aaPredicted RBP39.43■■■■□ 3.9
HDAC11-206ENST00000405025 SLC4A1APQ9BWU0 796 aaKnown RBP39.43■■■■□ 3.9
HDAC11-206ENST00000405025 PPP1R15AO75807 674 aaPredicted RBP39.42■■■■□ 3.9
HDAC11-206ENST00000405025 BCANQ96GW7 911 aa39.4■■■■□ 3.9
HDAC11-206ENST00000405025 HDGFP51858 240 aaKnown RBP39.37■■■■□ 3.89
HDAC11-206ENST00000405025 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.36■■■■□ 3.89
HDAC11-206ENST00000405025 XIRP1Q702N8 1843 aaKnown RBP39.35■■■■□ 3.89
HDAC11-206ENST00000405025 ALKQ9UM73 1620 aa39.35■■■■□ 3.89
HDAC11-206ENST00000405025 SETD5Q9C0A6 1442 aa39.33■■■■□ 3.89
HDAC11-206ENST00000405025 FOXD1Q16676 465 aa39.32■■■■□ 3.89
HDAC11-206ENST00000405025 NWD1Q149M9 1564 aa39.32■■■■□ 3.88
HDAC11-206ENST00000405025 KIF1BO60333 1816 aa39.31■■■■□ 3.88
HDAC11-206ENST00000405025 KCNA6P17658 529 aa39.3■■■■□ 3.88
HDAC11-206ENST00000405025 ADAMTS13Q76LX8 1427 aa39.3■■■■□ 3.88
HDAC11-206ENST00000405025 ZNF326Q5BKZ1 582 aaKnown RBP39.27■■■■□ 3.88
HDAC11-206ENST00000405025 NEXMIFQ5QGS0 1516 aa39.25■■■■□ 3.87
HDAC11-206ENST00000405025 TOM1O60784 492 aa39.25■■■■□ 3.87
HDAC11-206ENST00000405025 MPHOSPH9Q99550 1183 aa39.25■■■■□ 3.87
HDAC11-206ENST00000405025 CHD2O14647 1828 aaKnown RBP39.25■■■■□ 3.87
HDAC11-206ENST00000405025 PIP4K2BP78356 416 aa39.23■■■■□ 3.87
HDAC11-206ENST00000405025 DIP2AQ14689 1571 aa39.23■■■■□ 3.87
HDAC11-206ENST00000405025 NRXN3Q9Y4C0 1643 aa39.22■■■■□ 3.87
HDAC11-206ENST00000405025 TBX22Q9Y458 520 aa39.22■■■■□ 3.87
HDAC11-206ENST00000405025 NKTRP30414 1462 aaKnown RBP39.22■■■■□ 3.87
HDAC11-206ENST00000405025 RAB3GAP2Q9H2M9 1393 aa39.21■■■■□ 3.87
HDAC11-206ENST00000405025 SCAF1Q9H7N4 1312 aaKnown RBP39.21■■■■□ 3.87
HDAC11-206ENST00000405025 TMEM94Q12767 1356 aa39.21■■■■□ 3.87
HDAC11-206ENST00000405025 RBM33Q96EV2 1170 aaKnown RBP39.18■■■■□ 3.86
HDAC11-206ENST00000405025 SETBP1Q9Y6X0 1596 aa39.17■■■■□ 3.86
HDAC11-206ENST00000405025 PROSER2Q86WR7 435 aaPredicted RBP39.16■■■■□ 3.86
HDAC11-206ENST00000405025 PIK3R4Q99570 1358 aa39.08■■■■□ 3.85
HDAC11-206ENST00000405025 CCDC144AA2RUR9 1427 aa39.08■■■■□ 3.85
HDAC11-206ENST00000405025 PTPRUQ92729 1446 aa39.08■■■■□ 3.85
HDAC11-206ENST00000405025 ACIN1Q9UKV3 1341 aaKnown RBP39.07■■■■□ 3.84
HDAC11-206ENST00000405025 PPLO60437 1756 aa39.05■■■■□ 3.84
HDAC11-206ENST00000405025 HSPA1LP34931 641 aa39.05■■■■□ 3.84
HDAC11-206ENST00000405025 METP08581 1390 aa39.01■■■■□ 3.84
HDAC11-206ENST00000405025 XRN1Q8IZH2 1706 aaKnown RBP39■■■■□ 3.83
HDAC11-206ENST00000405025 SPATA31E1Q6ZUB1 1445 aa39■■■■□ 3.83
HDAC11-206ENST00000405025 RPGRIP1LQ68CZ1 1315 aa38.99■■■■□ 3.83
HDAC11-206ENST00000405025 AMOTL2Q9Y2J4 779 aa38.98■■■■□ 3.83
HDAC11-206ENST00000405025 SETD1AO15047 1707 aaKnown RBP38.96■■■■□ 3.83
HDAC11-206ENST00000405025 VGFO15240 615 aaPredicted RBP38.95■■■■□ 3.83
HDAC11-206ENST00000405025 MSH6P52701 1360 aa38.95■■■■□ 3.83
HDAC11-206ENST00000405025 IFT172Q9UG01 1749 aa38.92■■■■□ 3.82
HDAC11-206ENST00000405025 RGL3Q3MIN7 710 aa38.92■■■■□ 3.82
HDAC11-206ENST00000405025 NCOA3Q9Y6Q9 1424 aa38.89■■■■□ 3.82
HDAC11-206ENST00000405025 HRCP23327 699 aa38.86■■■■□ 3.81
HDAC11-206ENST00000405025 ROBO1Q9Y6N7 1651 aa38.85■■■■□ 3.81
HDAC11-206ENST00000405025 FAM135BQ49AJ0 1406 aa38.85■■■■□ 3.81
HDAC11-206ENST00000405025 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.85■■■■□ 3.81
HDAC11-206ENST00000405025 ADGRF5Q8IZF2 1346 aa38.85■■■■□ 3.81
HDAC11-206ENST00000405025 C14orf37Q86TY3 774 aa38.84■■■■□ 3.81
HDAC11-206ENST00000405025 ANKRD30BQ9BXX2 1392 aa38.81■■■■□ 3.8
HDAC11-206ENST00000405025 DISP3Q9P2K9 1392 aa38.78■■■■□ 3.8
HDAC11-206ENST00000405025 C19orf44Q9H6X5 657 aa38.76■■■■□ 3.8
HDAC11-206ENST00000405025 SLAIN2Q9P270 581 aa38.76■■■■□ 3.8
HDAC11-206ENST00000405025 PIK3C2GO75747 1445 aa38.71■■■■□ 3.79
HDAC11-206ENST00000405025 NALCNQ8IZF0 1738 aa38.7■■■■□ 3.79
HDAC11-206ENST00000405025 PTCH1Q13635 1447 aa38.7■■■■□ 3.79
HDAC11-206ENST00000405025 ROBO2Q9HCK4 1378 aa38.7■■■■□ 3.78
HDAC11-206ENST00000405025 ATF3P18847 181 aa38.68■■■■□ 3.78
HDAC11-206ENST00000405025 CADPS2Q86UW7 1296 aa38.68■■■■□ 3.78
HDAC11-206ENST00000405025 PRAG1Q86YV5 1406 aa38.68■■■■□ 3.78
HDAC11-206ENST00000405025 MED1Q15648 1581 aaPredicted RBP38.68■■■■□ 3.78
HDAC11-206ENST00000405025 ASXL1Q8IXJ9 1541 aa38.68■■■■□ 3.78
HDAC11-206ENST00000405025 ADGRL3Q9HAR2 1447 aa38.66■■■■□ 3.78
HDAC11-206ENST00000405025 DCCP43146 1447 aa38.65■■■■□ 3.78
HDAC11-206ENST00000405025 MYOM2P54296 1465 aa38.65■■■■□ 3.78
HDAC11-206ENST00000405025 NRXN1Q9ULB1 1477 aa38.64■■■■□ 3.78
HDAC11-206ENST00000405025 PHLPP1O60346 1717 aa38.6■■■■□ 3.77
HDAC11-206ENST00000405025 MST1RQ04912 1400 aa38.58■■■■□ 3.77
HDAC11-206ENST00000405025 TMEM132EQ6IEE7 984 aa38.57■■■■□ 3.76
HDAC11-206ENST00000405025 STK26Q9P289 416 aa38.54■■■■□ 3.76
HDAC11-206ENST00000405025 LRPPRCP42704 1394 aaKnown RBP38.54■■■■□ 3.76
HDAC11-206ENST00000405025 KNDC1Q76NI1 1749 aa38.53■■■■□ 3.76
HDAC11-206ENST00000405025 C14orf93Q9H972 538 aaKnown RBP38.52■■■■□ 3.76
HDAC11-206ENST00000405025 TECPR2O15040 1411 aa38.52■■■■□ 3.76
HDAC11-206ENST00000405025 LAMC1P11047 1609 aa38.52■■■■□ 3.76
HDAC11-206ENST00000405025 COL16A1Q07092 1604 aaPredicted RBP38.52■■■■□ 3.76
HDAC11-206ENST00000405025 CFAP70Q5T0N1 1121 aa38.5■■■■□ 3.75
HDAC11-206ENST00000405025 BRINP3Q76B58 766 aa38.5■■■■□ 3.75
HDAC11-206ENST00000405025 AHDC1Q5TGY3 1603 aaPredicted RBP38.49■■■■□ 3.75
HDAC11-206ENST00000405025 ILDR2Q71H61 639 aa38.49■■■■□ 3.75
HDAC11-206ENST00000405025 YTHDC2Q9H6S0 1430 aaKnown RBP38.48■■■■□ 3.75
HDAC11-206ENST00000405025 ABCC11Q96J66 1382 aa38.46■■■■□ 3.75
HDAC11-206ENST00000405025 DHX57Q6P158 1386 aaKnown RBP38.45■■■■□ 3.75
HDAC11-206ENST00000405025 WAPLQ7Z5K2 1190 aa38.44■■■■□ 3.74
HDAC11-206ENST00000405025 DCAF11Q8TEB1 546 aa38.44■■■■□ 3.74
HDAC11-206ENST00000405025 KDM2AQ9Y2K7 1162 aa38.44■■■■□ 3.74
HDAC11-206ENST00000405025 PLEKHH1Q9ULM0 1364 aa38.44■■■■□ 3.74
HDAC11-206ENST00000405025 C1orf167Q5SNV9 1468 aa38.41■■■■□ 3.74
HDAC11-206ENST00000405025 NHSL1Q5SYE7 1610 aa38.39■■■■□ 3.74
HDAC11-206ENST00000405025 CDC42BPGQ6DT37 1551 aa38.39■■■■□ 3.74
HDAC11-206ENST00000405025 ADGRB1O14514 1584 aa38.37■■■■□ 3.73
HDAC11-206ENST00000405025 JCADQ9P266 1359 aa38.35■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms