RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 SYNMO15061 1565 aa16.28■□□□□ 0.2
SMS-202ENST00000404933 SCAF11Q99590 1463 aaKnown RBP16.28■□□□□ 0.2
SMS-202ENST00000404933 NRXN1Q9ULB1 1477 aa16.28■□□□□ 0.2
SMS-202ENST00000404933 COL17A1Q9UMD9 1497 aaPredicted RBP16.28■□□□□ 0.2
SMS-202ENST00000404933 ARHGEF40Q8TER5 1519 aa16.27■□□□□ 0.2
SMS-202ENST00000404933 CHGAP10645 457 aaKnown RBP16.27■□□□□ 0.2
SMS-202ENST00000404933 RPGRIP1LQ68CZ1 1315 aa16.27■□□□□ 0.19
SMS-202ENST00000404933 PREX1Q8TCU6 1659 aa16.27■□□□□ 0.19
SMS-202ENST00000404933 TESK2Q96S53 571 aa16.26■□□□□ 0.19
SMS-202ENST00000404933 TMF1P82094 1093 aa16.25■□□□□ 0.19
SMS-202ENST00000404933 ADGRF5Q8IZF2 1346 aa16.25■□□□□ 0.19
SMS-202ENST00000404933 EIF3AQ14152 1382 aaKnown RBP16.25■□□□□ 0.19
SMS-202ENST00000404933 SLC52A1Q9NWF4 448 aa16.24■□□□□ 0.19
SMS-202ENST00000404933 DISP3Q9P2K9 1392 aa16.22■□□□□ 0.19
SMS-202ENST00000404933 SETBP1Q9Y6X0 1596 aa16.22■□□□□ 0.19
SMS-202ENST00000404933 CFAP70Q5T0N1 1121 aa16.22■□□□□ 0.19
SMS-202ENST00000404933 CLTCQ00610 1675 aaKnown RBP16.21■□□□□ 0.19
SMS-202ENST00000404933 PIK3C2GO75747 1445 aa16.2■□□□□ 0.18
SMS-202ENST00000404933 SLC24A1O60721 1099 aa16.19■□□□□ 0.18
SMS-202ENST00000404933 KTN1Q86UP2 1357 aaKnown RBP16.19■□□□□ 0.18
SMS-202ENST00000404933 IDI1Q13907 227 aa16.19■□□□□ 0.18
SMS-202ENST00000404933 CDCA8Q53HL2 280 aa16.19■□□□□ 0.18
SMS-202ENST00000404933 NEXMIFQ5QGS0 1516 aa16.19■□□□□ 0.18
SMS-202ENST00000404933 ERVK-7P63135 1459 aa16.18■□□□□ 0.18
SMS-202ENST00000404933 VGFO15240 615 aaPredicted RBP16.17■□□□□ 0.18
SMS-202ENST00000404933 MRS2Q9HD23 443 aa16.17■□□□□ 0.18
SMS-202ENST00000404933 TMEM131LA2VDJ0 1609 aa16.17■□□□□ 0.18
SMS-202ENST00000404933 MYO5BQ9ULV0 1848 aa16.17■□□□□ 0.18
SMS-202ENST00000404933 C14orf93Q9H972 538 aaKnown RBP16.17■□□□□ 0.18
SMS-202ENST00000404933 MYO3AQ8NEV4 1616 aa16.16■□□□□ 0.18
SMS-202ENST00000404933 ZFYVE9O95405 1425 aa16.15■□□□□ 0.18
SMS-202ENST00000404933 CCDC184Q52MB2 194 aa16.15■□□□□ 0.18
SMS-202ENST00000404933 SUPT16HQ9Y5B9 1047 aaKnown RBP16.15■□□□□ 0.18
SMS-202ENST00000404933 RALBP1Q15311 655 aa16.14■□□□□ 0.17
SMS-202ENST00000404933 SPATA31D1Q6ZQQ2 1576 aa16.14■□□□□ 0.17
SMS-202ENST00000404933 FBXO31Q5XUX0 539 aaPredicted RBP16.13■□□□□ 0.17
SMS-202ENST00000404933 ADGRB1O14514 1584 aa16.13■□□□□ 0.17
SMS-202ENST00000404933 KDM5AP29375 1690 aaKnown RBP16.13■□□□□ 0.17
SMS-202ENST00000404933 MLECQ14165 292 aa16.12■□□□□ 0.17
SMS-202ENST00000404933 SBNO2Q9Y2G9 1366 aa16.12■□□□□ 0.17
SMS-202ENST00000404933 PER1O15534 1290 aaPredicted RBP16.12■□□□□ 0.17
SMS-202ENST00000404933 ESF1Q9H501 851 aaKnown RBP16.12■□□□□ 0.17
SMS-202ENST00000404933 CNGB1Q14028 1251 aaPredicted RBP16.1■□□□□ 0.17
SMS-202ENST00000404933 PANK3Q9H999 370 aa16.1■□□□□ 0.17
SMS-202ENST00000404933 HNRNPUQ00839 825 aaKnown RBP eCLIP16.1■□□□□ 0.17
SMS-202ENST00000404933 MYBBP1AQ9BQG0 1328 aaKnown RBP16.09■□□□□ 0.17
SMS-202ENST00000404933 CENPJQ9HC77 1338 aaPredicted RBP16.09■□□□□ 0.17
SMS-202ENST00000404933 FAM9BQ8IZU0 186 aa16.08■□□□□ 0.17
SMS-202ENST00000404933 PARD3Q8TEW0 1356 aa16.08■□□□□ 0.16
SMS-202ENST00000404933 MYOM1P52179 1685 aa16.08■□□□□ 0.16
SMS-202ENST00000404933 QRICH2Q9H0J4 1663 aa16.08■□□□□ 0.16
SMS-202ENST00000404933 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.16
SMS-202ENST00000404933 NUTM2DQ5VT03 806 aaPredicted RBP16.07■□□□□ 0.16
SMS-202ENST00000404933 BRD4O60885 1362 aaPredicted RBP16.07■□□□□ 0.16
SMS-202ENST00000404933 ZMYM3Q14202 1370 aa16.07■□□□□ 0.16
SMS-202ENST00000404933 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
SMS-202ENST00000404933 TRAK1Q9UPV9 953 aa16.06■□□□□ 0.16
SMS-202ENST00000404933 TMEM132EQ6IEE7 984 aa16.05■□□□□ 0.16
SMS-202ENST00000404933 TMC1Q8TDI8 760 aa16.05■□□□□ 0.16
SMS-202ENST00000404933 ARHGEF28Q8N1W1 1705 aaKnown RBP16.04■□□□□ 0.16
SMS-202ENST00000404933 A2ML1A8K2U0 1454 aa16.04■□□□□ 0.16
SMS-202ENST00000404933 TRHP20396 242 aaPredicted RBP16.03■□□□□ 0.16
SMS-202ENST00000404933 NLRP13Q86W25 1043 aa16.03■□□□□ 0.16
SMS-202ENST00000404933 KNSTRNQ9Y448 316 aa16.03■□□□□ 0.16
SMS-202ENST00000404933 CC2D1BQ5T0F9 858 aaKnown RBP16.01■□□□□ 0.15
SMS-202ENST00000404933 PNISRQ8TF01 805 aaKnown RBP16.01■□□□□ 0.15
SMS-202ENST00000404933 ASXL1Q8IXJ9 1541 aa16■□□□□ 0.15
SMS-202ENST00000404933 RIMS2Q9UQ26 1411 aa16■□□□□ 0.15
SMS-202ENST00000404933 ALKQ9UM73 1620 aa16■□□□□ 0.15
SMS-202ENST00000404933 ZBED9Q6R2W3 1325 aa15.99■□□□□ 0.15
SMS-202ENST00000404933 TNRQ92752 1358 aa15.99■□□□□ 0.15
SMS-202ENST00000404933 NPC1L1Q9UHC9 1359 aa15.98■□□□□ 0.15
SMS-202ENST00000404933 PUS7Q96PZ0 661 aaKnown RBP15.98■□□□□ 0.15
SMS-202ENST00000404933 AMER1Q5JTC6 1135 aaPredicted RBP15.97■□□□□ 0.15
SMS-202ENST00000404933 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.96■□□□□ 0.15
SMS-202ENST00000404933 LRPPRCP42704 1394 aaKnown RBP15.96■□□□□ 0.15
SMS-202ENST00000404933 EVC2Q86UK5 1308 aa15.96■□□□□ 0.15
SMS-202ENST00000404933 YTHDC2Q9H6S0 1430 aaKnown RBP15.96■□□□□ 0.15
SMS-202ENST00000404933 TSHZ2Q9NRE2 1034 aa15.95■□□□□ 0.14
SMS-202ENST00000404933 HDGFP51858 240 aaKnown RBP15.94■□□□□ 0.14
SMS-202ENST00000404933 PTPRMP28827 1452 aa15.94■□□□□ 0.14
SMS-202ENST00000404933 STK26Q9P289 416 aa15.94■□□□□ 0.14
SMS-202ENST00000404933 SETD1AO15047 1707 aaKnown RBP15.94■□□□□ 0.14
SMS-202ENST00000404933 UBR1Q8IWV7 1749 aa15.94■□□□□ 0.14
SMS-202ENST00000404933 TULP4Q9NRJ4 1543 aa15.93■□□□□ 0.14
SMS-202ENST00000404933 FER1L4A9Z1Z3 1794 aa15.93■□□□□ 0.14
SMS-202ENST00000404933 NLRP1Q9C000 1473 aa15.92■□□□□ 0.14
SMS-202ENST00000404933 SENP3Q9H4L4 574 aaPredicted RBP15.91■□□□□ 0.14
SMS-202ENST00000404933 C3P01024 1663 aa15.91■□□□□ 0.14
SMS-202ENST00000404933 DLC1Q96QB1 1528 aa15.91■□□□□ 0.14
SMS-202ENST00000404933 INSRP06213 1382 aa15.9■□□□□ 0.14
SMS-202ENST00000404933 NRXN3Q9Y4C0 1643 aa15.9■□□□□ 0.14
SMS-202ENST00000404933 NEFLP07196 543 aa15.89■□□□□ 0.13
SMS-202ENST00000404933 PPP2R1AP30153 589 aa15.89■□□□□ 0.13
SMS-202ENST00000404933 CARD14Q9BXL6 1004 aa15.89■□□□□ 0.13
SMS-202ENST00000404933 POGKQ9P215 609 aa15.89■□□□□ 0.13
SMS-202ENST00000404933 PRAM1Q96QH2 718 aa15.89■□□□□ 0.13
SMS-202ENST00000404933 TMEM2Q9UHN6 1383 aa15.88■□□□□ 0.13
SMS-202ENST00000404933 SLC12A5Q9H2X9 1139 aa15.88■□□□□ 0.13
SMS-202ENST00000404933 NINLQ9Y2I6 1382 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms