RNA–Protein interactions for RNA: ENST00000404876.1

TCF20-203, Transcript of transcription factor 20, humanhuman

TSL 3 BASIC

Gene TCF20, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF20-203ENST00000404876 ADGRB3O60242 1522 aa25.28■■□□□ 1.64
TCF20-203ENST00000404876 C14orf37Q86TY3 774 aa25.27■■□□□ 1.64
TCF20-203ENST00000404876 SLC52A1Q9NWF4 448 aa25.27■■□□□ 1.64
TCF20-203ENST00000404876 NCOA3Q9Y6Q9 1424 aa25.27■■□□□ 1.64
TCF20-203ENST00000404876 LMTK2Q8IWU2 1503 aa25.27■■□□□ 1.64
TCF20-203ENST00000404876 CHD2O14647 1828 aaKnown RBP25.26■■□□□ 1.63
TCF20-203ENST00000404876 CDK12Q9NYV4 1490 aaPredicted RBP25.25■■□□□ 1.63
TCF20-203ENST00000404876 SHPRHQ149N8 1683 aa25.24■■□□□ 1.63
TCF20-203ENST00000404876 NOS1P29475 1434 aa25.24■■□□□ 1.63
TCF20-203ENST00000404876 HDGFP51858 240 aaKnown RBP25.24■■□□□ 1.63
TCF20-203ENST00000404876 PLEKHG1Q9ULL1 1385 aa25.23■■□□□ 1.63
TCF20-203ENST00000404876 PPP1R15AO75807 674 aaPredicted RBP25.23■■□□□ 1.63
TCF20-203ENST00000404876 CADPS2Q86UW7 1296 aa25.23■■□□□ 1.63
TCF20-203ENST00000404876 AHDC1Q5TGY3 1603 aaPredicted RBP25.23■■□□□ 1.63
TCF20-203ENST00000404876 ABCC5O15440 1437 aa25.21■■□□□ 1.63
TCF20-203ENST00000404876 ATF3P18847 181 aa25.21■■□□□ 1.63
TCF20-203ENST00000404876 CROCC2H7BZ55 1655 aa25.2■■□□□ 1.63
TCF20-203ENST00000404876 C19orf44Q9H6X5 657 aa25.2■■□□□ 1.62
TCF20-203ENST00000404876 NUTM2BA6NNL0 878 aaPredicted RBP25.19■■□□□ 1.62
TCF20-203ENST00000404876 NUTM2EB1AL46 878 aaPredicted RBP25.19■■□□□ 1.62
TCF20-203ENST00000404876 KANK4Q5T7N3 995 aaPredicted RBP25.19■■□□□ 1.62
TCF20-203ENST00000404876 NUTM2AQ8IVF1 878 aaPredicted RBP25.19■■□□□ 1.62
TCF20-203ENST00000404876 TBX22Q9Y458 520 aa25.19■■□□□ 1.62
TCF20-203ENST00000404876 ZFYVE9O95405 1425 aa25.18■■□□□ 1.62
TCF20-203ENST00000404876 AFF2P51816 1311 aa25.15■■□□□ 1.62
TCF20-203ENST00000404876 RIMS2Q9UQ26 1411 aa25.15■■□□□ 1.62
TCF20-203ENST00000404876 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.15■■□□□ 1.62
TCF20-203ENST00000404876 VPS8Q8N3P4 1428 aa25.14■■□□□ 1.62
TCF20-203ENST00000404876 ANKRD30AQ9BXX3 1397 aa25.14■■□□□ 1.61
TCF20-203ENST00000404876 DAPK1P53355 1430 aa25.12■■□□□ 1.61
TCF20-203ENST00000404876 BRINP3Q76B58 766 aa25.12■■□□□ 1.61
TCF20-203ENST00000404876 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.11■■□□□ 1.61
TCF20-203ENST00000404876 DIP2AQ14689 1571 aa25.1■■□□□ 1.61
TCF20-203ENST00000404876 MYO5BQ9ULV0 1848 aa25.09■■□□□ 1.61
TCF20-203ENST00000404876 RPRD2Q5VT52 1461 aaKnown RBP25.09■■□□□ 1.61
TCF20-203ENST00000404876 PTPN23Q9H3S7 1636 aa25.09■■□□□ 1.61
TCF20-203ENST00000404876 RBM6P78332 1123 aaKnown RBP25.09■■□□□ 1.61
TCF20-203ENST00000404876 CHIC2Q9UKJ5 165 aa25.09■■□□□ 1.61
TCF20-203ENST00000404876 PIK3R4Q99570 1358 aa25.08■■□□□ 1.61
TCF20-203ENST00000404876 RGS12O14924 1447 aa25.07■■□□□ 1.6
TCF20-203ENST00000404876 QTRT2Q9H974 415 aaKnown RBP25.07■■□□□ 1.6
TCF20-203ENST00000404876 NUTM2DQ5VT03 806 aaPredicted RBP25.06■■□□□ 1.6
TCF20-203ENST00000404876 GCC2Q8IWJ2 1684 aa25.06■■□□□ 1.6
TCF20-203ENST00000404876 FOXD1Q16676 465 aa25.05■■□□□ 1.6
TCF20-203ENST00000404876 SRCAPQ6ZRS2 3230 aa25.05■■□□□ 1.6
TCF20-203ENST00000404876 TMEM131LA2VDJ0 1609 aa25.04■■□□□ 1.6
TCF20-203ENST00000404876 ADAMTS13Q76LX8 1427 aa25.04■■□□□ 1.6
TCF20-203ENST00000404876 SETD5Q9C0A6 1442 aa25.04■■□□□ 1.6
TCF20-203ENST00000404876 C8orf37Q96NL8 207 aa25.04■■□□□ 1.6
TCF20-203ENST00000404876 CHGAP10645 457 aaKnown RBP25.03■■□□□ 1.6
TCF20-203ENST00000404876 LRRC59Q96AG4 307 aaKnown RBP25.03■■□□□ 1.6
TCF20-203ENST00000404876 DCCP43146 1447 aa25.02■■□□□ 1.6
TCF20-203ENST00000404876 AMOTL2Q9Y2J4 779 aa25.01■■□□□ 1.59
TCF20-203ENST00000404876 ASXL1Q8IXJ9 1541 aa25.01■■□□□ 1.59
TCF20-203ENST00000404876 NGLY1Q96IV0 654 aa25■■□□□ 1.59
TCF20-203ENST00000404876 ATAD2Q6PL18 1390 aa24.98■■□□□ 1.59
TCF20-203ENST00000404876 ZRANB1Q9UGI0 708 aa24.98■■□□□ 1.59
TCF20-203ENST00000404876 TRPM2O94759 1503 aa24.97■■□□□ 1.59
TCF20-203ENST00000404876 NHSL1Q5SYE7 1610 aa24.95■■□□□ 1.58
TCF20-203ENST00000404876 PNPLA6Q8IY17 1366 aa24.93■■□□□ 1.58
TCF20-203ENST00000404876 MST1RQ04912 1400 aa24.93■■□□□ 1.58
TCF20-203ENST00000404876 PTPRUQ92729 1446 aa24.93■■□□□ 1.58
TCF20-203ENST00000404876 ANKRD50Q9ULJ7 1429 aa24.92■■□□□ 1.58
TCF20-203ENST00000404876 ADGRL2O95490 1459 aa24.91■■□□□ 1.58
TCF20-203ENST00000404876 APLP2Q06481 763 aa24.91■■□□□ 1.58
TCF20-203ENST00000404876 ADAMTS2O95450 1211 aa24.89■■□□□ 1.58
TCF20-203ENST00000404876 DDX17Q92841 729 aaKnown RBP24.88■■□□□ 1.57
TCF20-203ENST00000404876 TRPC5Q9UL62 973 aaPredicted RBP24.86■■□□□ 1.57
TCF20-203ENST00000404876 UNC13BO14795 1591 aa24.85■■□□□ 1.57
TCF20-203ENST00000404876 USP21Q9UK80 565 aa24.85■■□□□ 1.57
TCF20-203ENST00000404876 XRN1Q8IZH2 1706 aaKnown RBP24.83■■□□□ 1.57
TCF20-203ENST00000404876 CCDC125Q86Z20 511 aa24.83■■□□□ 1.57
TCF20-203ENST00000404876 SETBP1Q9Y6X0 1596 aa24.81■■□□□ 1.56
TCF20-203ENST00000404876 ADGRL3Q9HAR2 1447 aa24.8■■□□□ 1.56
TCF20-203ENST00000404876 E9PCH4 1651 aa24.8■■□□□ 1.56
TCF20-203ENST00000404876 FAM50AQ14320 339 aaKnown RBP24.77■■□□□ 1.56
TCF20-203ENST00000404876 FNBP4Q8N3X1 1017 aaPredicted RBP24.77■■□□□ 1.56
TCF20-203ENST00000404876 LOC105371045A0A1W2PR82 267 aa24.76■■□□□ 1.55
TCF20-203ENST00000404876 PTCH1Q13635 1447 aa24.76■■□□□ 1.55
TCF20-203ENST00000404876 NRXN3Q9Y4C0 1643 aa24.75■■□□□ 1.55
TCF20-203ENST00000404876 METP08581 1390 aa24.75■■□□□ 1.55
TCF20-203ENST00000404876 ATRNO75882 1429 aa24.75■■□□□ 1.55
TCF20-203ENST00000404876 C1orf167Q5SNV9 1468 aa24.73■■□□□ 1.55
TCF20-203ENST00000404876 SOS2Q07890 1332 aaPredicted RBP24.73■■□□□ 1.55
TCF20-203ENST00000404876 LAMC1P11047 1609 aa24.71■■□□□ 1.55
TCF20-203ENST00000404876 NALCNQ8IZF0 1738 aa24.7■■□□□ 1.54
TCF20-203ENST00000404876 ZNF326Q5BKZ1 582 aaKnown RBP24.7■■□□□ 1.54
TCF20-203ENST00000404876 IQGAP3Q86VI3 1631 aa24.68■■□□□ 1.54
TCF20-203ENST00000404876 EP400Q96L91 3159 aa24.68■■□□□ 1.54
TCF20-203ENST00000404876 ORAI2Q96SN7 254 aa24.67■■□□□ 1.54
TCF20-203ENST00000404876 NUP155O75694 1391 aa24.65■■□□□ 1.54
TCF20-203ENST00000404876 GJD4Q96KN9 370 aaPredicted RBP24.63■■□□□ 1.53
TCF20-203ENST00000404876 COL22A1Q8NFW1 1626 aaPredicted RBP24.63■■□□□ 1.53
TCF20-203ENST00000404876 BCL9LQ86UU0 1499 aa24.62■■□□□ 1.53
TCF20-203ENST00000404876 BLMP54132 1417 aaPredicted RBP24.61■■□□□ 1.53
TCF20-203ENST00000404876 MYOM2P54296 1465 aa24.59■■□□□ 1.53
TCF20-203ENST00000404876 ROCK1Q13464 1354 aa24.57■■□□□ 1.52
TCF20-203ENST00000404876 SF3B2Q13435 895 aaKnown RBP24.57■■□□□ 1.52
TCF20-203ENST00000404876 NPHP3Q7Z494 1330 aa24.57■■□□□ 1.52
TCF20-203ENST00000404876 SPHKAPQ2M3C7 1700 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms