RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 CEBPAP49715 358 aaPredicted RBP32.49■■■□□ 2.79
TRIOBP-203ENST00000403663 C3P01024 1663 aa32.48■■■□□ 2.79
TRIOBP-203ENST00000403663 MADDQ8WXG6 1647 aa32.46■■■□□ 2.79
TRIOBP-203ENST00000403663 MSH5O43196 834 aa32.45■■■□□ 2.79
TRIOBP-203ENST00000403663 SLC52A1Q9NWF4 448 aa32.45■■■□□ 2.79
TRIOBP-203ENST00000403663 TMEM131LA2VDJ0 1609 aa32.44■■■□□ 2.78
TRIOBP-203ENST00000403663 TRPM1Q7Z4N2 1603 aa32.44■■■□□ 2.78
TRIOBP-203ENST00000403663 ANP32CO43423 234 aa32.43■■■□□ 2.78
TRIOBP-203ENST00000403663 PLPPR3Q6T4P5 718 aa32.43■■■□□ 2.78
TRIOBP-203ENST00000403663 RALGAPBQ86X10 1494 aa32.42■■■□□ 2.78
TRIOBP-203ENST00000403663 PPLO60437 1756 aa32.42■■■□□ 2.78
TRIOBP-203ENST00000403663 RIMS1Q86UR5 1692 aaKnown RBP32.4■■■□□ 2.78
TRIOBP-203ENST00000403663 ADAMTSL3P82987 1691 aa32.39■■■□□ 2.78
TRIOBP-203ENST00000403663 ADGRF5Q8IZF2 1346 aa32.37■■■□□ 2.77
TRIOBP-203ENST00000403663 NBPF1Q3BBV0 1214 aa32.37■■■□□ 2.77
TRIOBP-203ENST00000403663 NUTM2DQ5VT03 806 aaPredicted RBP32.35■■■□□ 2.77
TRIOBP-203ENST00000403663 TNRQ92752 1358 aa32.35■■■□□ 2.77
TRIOBP-203ENST00000403663 HSPA5P11021 654 aaKnown RBP32.34■■■□□ 2.77
TRIOBP-203ENST00000403663 NEXMIFQ5QGS0 1516 aa32.34■■■□□ 2.77
TRIOBP-203ENST00000403663 MYOM2P54296 1465 aa32.34■■■□□ 2.77
TRIOBP-203ENST00000403663 FANCIQ9NVI1 1328 aa32.31■■■□□ 2.76
TRIOBP-203ENST00000403663 ROCK2O75116 1388 aaKnown RBP32.31■■■□□ 2.76
TRIOBP-203ENST00000403663 EIF4G2P78344 907 aaKnown RBP eCLIP32.29■■■□□ 2.76
TRIOBP-203ENST00000403663 CARD11Q9BXL7 1154 aa32.29■■■□□ 2.76
TRIOBP-203ENST00000403663 A2ML1A8K2U0 1454 aa32.29■■■□□ 2.76
TRIOBP-203ENST00000403663 STAG3Q9UJ98 1225 aa32.28■■■□□ 2.76
TRIOBP-203ENST00000403663 NRXN1Q9ULB1 1477 aa32.28■■■□□ 2.76
TRIOBP-203ENST00000403663 RPGRIP1LQ68CZ1 1315 aa32.26■■■□□ 2.75
TRIOBP-203ENST00000403663 STAC3Q96MF2 364 aa32.26■■■□□ 2.75
TRIOBP-203ENST00000403663 USP47Q96K76 1375 aa32.25■■■□□ 2.75
TRIOBP-203ENST00000403663 SENP3Q9H4L4 574 aaPredicted RBP32.25■■■□□ 2.75
TRIOBP-203ENST00000403663 UBR1Q8IWV7 1749 aa32.22■■■□□ 2.75
TRIOBP-203ENST00000403663 GPRASP1Q5JY77 1395 aa32.22■■■□□ 2.75
TRIOBP-203ENST00000403663 CFAP70Q5T0N1 1121 aa32.22■■■□□ 2.75
TRIOBP-203ENST00000403663 PIK3C2GO75747 1445 aa32.21■■■□□ 2.75
TRIOBP-203ENST00000403663 KIAA1210Q9ULL0 1709 aa32.19■■■□□ 2.74
TRIOBP-203ENST00000403663 LAMC1P11047 1609 aa32.18■■■□□ 2.74
TRIOBP-203ENST00000403663 MYO3AQ8NEV4 1616 aa32.16■■■□□ 2.74
TRIOBP-203ENST00000403663 NLRP1Q9C000 1473 aa32.16■■■□□ 2.74
TRIOBP-203ENST00000403663 VGFO15240 615 aaPredicted RBP32.15■■■□□ 2.74
TRIOBP-203ENST00000403663 KDM5AP29375 1690 aaKnown RBP32.14■■■□□ 2.74
TRIOBP-203ENST00000403663 RIMS2Q9UQ26 1411 aa32.13■■■□□ 2.73
TRIOBP-203ENST00000403663 C11orf95C9JLR9 678 aaPredicted RBP32.12■■■□□ 2.73
TRIOBP-203ENST00000403663 ZFYVE9O95405 1425 aa32.12■■■□□ 2.73
TRIOBP-203ENST00000403663 IQGAP1P46940 1657 aa32.11■■■□□ 2.73
TRIOBP-203ENST00000403663 ST20-MTHFSA0A0A6YYL1 179 aa32.1■■■□□ 2.73
TRIOBP-203ENST00000403663 C14orf93Q9H972 538 aaKnown RBP32.09■■■□□ 2.73
TRIOBP-203ENST00000403663 PTPRMP28827 1452 aa32.08■■■□□ 2.73
TRIOBP-203ENST00000403663 ERICH6Q7L0X2 663 aa32.06■■■□□ 2.72
TRIOBP-203ENST00000403663 HNRNPUQ00839 825 aaKnown RBP eCLIP32.05■■■□□ 2.72
TRIOBP-203ENST00000403663 TMEM132EQ6IEE7 984 aa32.05■■■□□ 2.72
TRIOBP-203ENST00000403663 WASHC2AQ641Q2 1341 aa32.05■■■□□ 2.72
TRIOBP-203ENST00000403663 ADGRB1O14514 1584 aa32.05■■■□□ 2.72
TRIOBP-203ENST00000403663 TMEM2Q9UHN6 1383 aa32.05■■■□□ 2.72
TRIOBP-203ENST00000403663 IRX6P78412 446 aaPredicted RBP32.04■■■□□ 2.72
TRIOBP-203ENST00000403663 SETBP1Q9Y6X0 1596 aa32.03■■■□□ 2.72
TRIOBP-203ENST00000403663 CEP170BQ9Y4F5 1589 aaPredicted RBP32.02■■■□□ 2.72
TRIOBP-203ENST00000403663 SCAF11Q99590 1463 aaKnown RBP32.01■■■□□ 2.72
TRIOBP-203ENST00000403663 ASXL1Q8IXJ9 1541 aa32■■■□□ 2.71
TRIOBP-203ENST00000403663 SETD1BQ9UPS6 1966 aaKnown RBP31.99■■■□□ 2.71
TRIOBP-203ENST00000403663 POLR1AO95602 1720 aaPredicted RBP31.99■■■□□ 2.71
TRIOBP-203ENST00000403663 NRXN3Q9Y4C0 1643 aa31.99■■■□□ 2.71
TRIOBP-203ENST00000403663 ALKQ9UM73 1620 aa31.98■■■□□ 2.71
TRIOBP-203ENST00000403663 LTKP29376 864 aa31.98■■■□□ 2.71
TRIOBP-203ENST00000403663 ERICH6BQ5W0A0 696 aa31.97■■■□□ 2.71
TRIOBP-203ENST00000403663 KIF7Q2M1P5 1343 aa31.95■■■□□ 2.71
TRIOBP-203ENST00000403663 CCDC7Q96M83 1385 aa31.95■■■□□ 2.71
TRIOBP-203ENST00000403663 SETD1AO15047 1707 aaKnown RBP31.95■■■□□ 2.7
TRIOBP-203ENST00000403663 ZNF142P52746 1687 aaPredicted RBP31.95■■■□□ 2.7
TRIOBP-203ENST00000403663 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.94■■■□□ 2.7
TRIOBP-203ENST00000403663 TESK2Q96S53 571 aa31.94■■■□□ 2.7
TRIOBP-203ENST00000403663 SLIT1O75093 1534 aa31.93■■■□□ 2.7
TRIOBP-203ENST00000403663 ARHGAP23Q9P227 1491 aa31.93■■■□□ 2.7
TRIOBP-203ENST00000403663 KDM4FA0A1W2PPD8 638 aa31.92■■■□□ 2.7
TRIOBP-203ENST00000403663 TRAK1Q9UPV9 953 aa31.92■■■□□ 2.7
TRIOBP-203ENST00000403663 TXNDC2Q86VQ3 553 aa31.9■■■□□ 2.7
TRIOBP-203ENST00000403663 THEMISQ8N1K5 641 aaPredicted RBP31.9■■■□□ 2.7
TRIOBP-203ENST00000403663 PPP4R2Q9NY27 417 aa31.89■■■□□ 2.7
TRIOBP-203ENST00000403663 HDGFP51858 240 aaKnown RBP31.86■■■□□ 2.69
TRIOBP-203ENST00000403663 POLR3GLQ9BT43 218 aa31.86■■■□□ 2.69
TRIOBP-203ENST00000403663 DISP3Q9P2K9 1392 aa31.86■■■□□ 2.69
TRIOBP-203ENST00000403663 STK26Q9P289 416 aa31.86■■■□□ 2.69
TRIOBP-203ENST00000403663 ARHGEF28Q8N1W1 1705 aaKnown RBP31.85■■■□□ 2.69
TRIOBP-203ENST00000403663 EIF3AQ14152 1382 aaKnown RBP31.83■■■□□ 2.69
TRIOBP-203ENST00000403663 EID1Q9Y6B2 187 aa31.82■■■□□ 2.68
TRIOBP-203ENST00000403663 METP08581 1390 aa31.82■■■□□ 2.68
TRIOBP-203ENST00000403663 PLEKHG1Q9ULL1 1385 aa31.81■■■□□ 2.68
TRIOBP-203ENST00000403663 ADAMTS13Q76LX8 1427 aa31.81■■■□□ 2.68
TRIOBP-203ENST00000403663 YTHDC2Q9H6S0 1430 aaKnown RBP31.81■■■□□ 2.68
TRIOBP-203ENST00000403663 QRICH2Q9H0J4 1663 aa31.79■■■□□ 2.68
TRIOBP-203ENST00000403663 CENPJQ9HC77 1338 aaPredicted RBP31.76■■■□□ 2.68
TRIOBP-203ENST00000403663 SLC26A8Q96RN1 970 aa31.76■■■□□ 2.67
TRIOBP-203ENST00000403663 DEKP35659 375 aaKnown RBP31.74■■■□□ 2.67
TRIOBP-203ENST00000403663 TMF1P82094 1093 aa31.73■■■□□ 2.67
TRIOBP-203ENST00000403663 SAFB2Q14151 953 aaKnown RBP eCLIP31.72■■■□□ 2.67
TRIOBP-203ENST00000403663 MED14O60244 1454 aa31.72■■■□□ 2.67
TRIOBP-203ENST00000403663 LRPPRCP42704 1394 aaKnown RBP31.7■■■□□ 2.66
TRIOBP-203ENST00000403663 CCDC184Q52MB2 194 aa31.67■■■□□ 2.66
TRIOBP-203ENST00000403663 PRAM1Q96QH2 718 aa31.67■■■□□ 2.66
TRIOBP-203ENST00000403663 B4GALNT3Q6L9W6 998 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms