RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 ABCC3O15438 1527 aa24.17■■□□□ 1.46
CHTOP-205ENST00000403433 SYNMO15061 1565 aa24.17■■□□□ 1.46
CHTOP-205ENST00000403433 CDCA8Q53HL2 280 aa24.17■■□□□ 1.46
CHTOP-205ENST00000403433 NPATQ14207 1427 aa24.17■■□□□ 1.46
CHTOP-205ENST00000403433 DIP2CQ9Y2E4 1556 aa24.17■■□□□ 1.46
CHTOP-205ENST00000403433 CAMSAP1Q5T5Y3 1602 aa24.16■■□□□ 1.46
CHTOP-205ENST00000403433 ERICH6BQ5W0A0 696 aa24.16■■□□□ 1.46
CHTOP-205ENST00000403433 GGT6Q6P531 493 aa24.15■■□□□ 1.46
CHTOP-205ENST00000403433 IRX6P78412 446 aaPredicted RBP24.14■■□□□ 1.46
CHTOP-205ENST00000403433 NRXN1Q9ULB1 1477 aa24.14■■□□□ 1.45
CHTOP-205ENST00000403433 KDM5AP29375 1690 aaKnown RBP24.13■■□□□ 1.45
CHTOP-205ENST00000403433 RAPGEF3O95398 923 aa24.13■■□□□ 1.45
CHTOP-205ENST00000403433 TSHZ2Q9NRE2 1034 aa24.13■■□□□ 1.45
CHTOP-205ENST00000403433 CFAP65Q6ZU64 1925 aaKnown RBP24.12■■□□□ 1.45
CHTOP-205ENST00000403433 GLI2P10070 1586 aa24.12■■□□□ 1.45
CHTOP-205ENST00000403433 ADGRF5Q8IZF2 1346 aa24.12■■□□□ 1.45
CHTOP-205ENST00000403433 CC2D1BQ5T0F9 858 aaKnown RBP24.12■■□□□ 1.45
CHTOP-205ENST00000403433 PPLO60437 1756 aa24.11■■□□□ 1.45
CHTOP-205ENST00000403433 NUDCQ9Y266 331 aa24.1■■□□□ 1.45
CHTOP-205ENST00000403433 MYOM1P52179 1685 aa24.1■■□□□ 1.45
CHTOP-205ENST00000403433 CFAP70Q5T0N1 1121 aa24.1■■□□□ 1.45
CHTOP-205ENST00000403433 ZC3H13Q5T200 1668 aaKnown RBP24.09■■□□□ 1.45
CHTOP-205ENST00000403433 NOS1P29475 1434 aa24.08■■□□□ 1.45
CHTOP-205ENST00000403433 SETBP1Q9Y6X0 1596 aa24.07■■□□□ 1.44
CHTOP-205ENST00000403433 MYO3AQ8NEV4 1616 aa24.07■■□□□ 1.44
CHTOP-205ENST00000403433 CHGAP10645 457 aaKnown RBP24.07■■□□□ 1.44
CHTOP-205ENST00000403433 SLC24A1O60721 1099 aa24.06■■□□□ 1.44
CHTOP-205ENST00000403433 RIMBP3CA6NJZ7 1639 aa24.06■■□□□ 1.44
CHTOP-205ENST00000403433 RIMBP3BA6NNM3 1639 aa24.06■■□□□ 1.44
CHTOP-205ENST00000403433 RIMBP3Q9UFD9 1639 aa24.06■■□□□ 1.44
CHTOP-205ENST00000403433 SIGLEC1Q9BZZ2 1709 aa24.05■■□□□ 1.44
CHTOP-205ENST00000403433 CYB5RLQ6IPT4 315 aa24.04■■□□□ 1.44
CHTOP-205ENST00000403433 KNSTRNQ9Y448 316 aa24.04■■□□□ 1.44
CHTOP-205ENST00000403433 ZMYM4Q5VZL5 1548 aa24.03■■□□□ 1.44
CHTOP-205ENST00000403433 PIK3C2BO00750 1634 aa24.03■■□□□ 1.44
CHTOP-205ENST00000403433 PPP4R2Q9NY27 417 aa24.02■■□□□ 1.44
CHTOP-205ENST00000403433 PIK3C2GO75747 1445 aa24.02■■□□□ 1.44
CHTOP-205ENST00000403433 ASXL1Q8IXJ9 1541 aa24.02■■□□□ 1.44
CHTOP-205ENST00000403433 INSRP06213 1382 aa24.01■■□□□ 1.43
CHTOP-205ENST00000403433 ERVK-7P63135 1459 aa24.01■■□□□ 1.43
CHTOP-205ENST00000403433 RPGRIP1LQ68CZ1 1315 aa24■■□□□ 1.43
CHTOP-205ENST00000403433 YEATS2Q9ULM3 1422 aa24■■□□□ 1.43
CHTOP-205ENST00000403433 SENP3-EIF4A1A0A087X0R7 540 aa23.99■■□□□ 1.43
CHTOP-205ENST00000403433 ARHGAP31Q2M1Z3 1444 aa23.99■■□□□ 1.43
CHTOP-205ENST00000403433 DIP2BQ9P265 1576 aa23.98■■□□□ 1.43
CHTOP-205ENST00000403433 BLMP54132 1417 aaPredicted RBP23.97■■□□□ 1.43
CHTOP-205ENST00000403433 SBNO2Q9Y2G9 1366 aa23.97■■□□□ 1.43
CHTOP-205ENST00000403433 AMER1Q5JTC6 1135 aaPredicted RBP23.96■■□□□ 1.43
CHTOP-205ENST00000403433 QRICH2Q9H0J4 1663 aa23.95■■□□□ 1.42
CHTOP-205ENST00000403433 NPC1L1Q9UHC9 1359 aa23.95■■□□□ 1.42
CHTOP-205ENST00000403433 ADGRB1O14514 1584 aa23.94■■□□□ 1.42
CHTOP-205ENST00000403433 RNF123Q5XPI4 1314 aa23.94■■□□□ 1.42
CHTOP-205ENST00000403433 C14orf93Q9H972 538 aaKnown RBP23.93■■□□□ 1.42
CHTOP-205ENST00000403433 NEXMIFQ5QGS0 1516 aa23.93■■□□□ 1.42
CHTOP-205ENST00000403433 CENPJQ9HC77 1338 aaPredicted RBP23.93■■□□□ 1.42
CHTOP-205ENST00000403433 PPP2R1AP30153 589 aa23.91■■□□□ 1.42
CHTOP-205ENST00000403433 FAM69CQ0P6D2 419 aa23.91■■□□□ 1.42
CHTOP-205ENST00000403433 PDE3BQ13370 1112 aa23.91■■□□□ 1.42
CHTOP-205ENST00000403433 PREX1Q8TCU6 1659 aa23.91■■□□□ 1.42
CHTOP-205ENST00000403433 TSPOAP1O95153 1857 aa23.91■■□□□ 1.42
CHTOP-205ENST00000403433 TRAK1Q9UPV9 953 aa23.87■■□□□ 1.41
CHTOP-205ENST00000403433 VGFO15240 615 aaPredicted RBP23.86■■□□□ 1.41
CHTOP-205ENST00000403433 SALL2Q9Y467 1007 aaPredicted RBP23.86■■□□□ 1.41
CHTOP-205ENST00000403433 SLC52A1Q9NWF4 448 aa23.84■■□□□ 1.41
CHTOP-205ENST00000403433 MYO5BQ9ULV0 1848 aa23.84■■□□□ 1.41
CHTOP-205ENST00000403433 REREQ9P2R6 1566 aa23.84■■□□□ 1.41
CHTOP-205ENST00000403433 WDR43Q15061 677 aaKnown RBP eCLIP23.84■■□□□ 1.417e-6■■■■■ 27.3
CHTOP-205ENST00000403433 ARHGEF28Q8N1W1 1705 aaKnown RBP23.84■■□□□ 1.41
CHTOP-205ENST00000403433 B4GALNT3Q6L9W6 998 aa23.83■■□□□ 1.41
CHTOP-205ENST00000403433 TMEM132EQ6IEE7 984 aa23.82■■□□□ 1.4
CHTOP-205ENST00000403433 TMEM131LA2VDJ0 1609 aa23.81■■□□□ 1.4
CHTOP-205ENST00000403433 IDI1Q13907 227 aa23.81■■□□□ 1.4
CHTOP-205ENST00000403433 ZFYVE9O95405 1425 aa23.81■■□□□ 1.4
CHTOP-205ENST00000403433 ADAMTS8Q9UP79 889 aa23.8■■□□□ 1.4
CHTOP-205ENST00000403433 NUTM2DQ5VT03 806 aaPredicted RBP23.79■■□□□ 1.4
CHTOP-205ENST00000403433 AGLP35573 1532 aa23.78■■□□□ 1.4
CHTOP-205ENST00000403433 CARD14Q9BXL6 1004 aa23.78■■□□□ 1.4
CHTOP-205ENST00000403433 RCAN3Q9UKA8 241 aa23.78■■□□□ 1.4
CHTOP-205ENST00000403433 RBM19Q9Y4C8 960 aaKnown RBP23.76■■□□□ 1.39
CHTOP-205ENST00000403433 RRP1P56182 461 aaKnown RBP23.75■■□□□ 1.39
CHTOP-205ENST00000403433 USP32Q8NFA0 1604 aa23.74■■□□□ 1.39
CHTOP-205ENST00000403433 NSD3Q9BZ95 1437 aa23.73■■□□□ 1.39
CHTOP-205ENST00000403433 CDCA7LQ96GN5 454 aa23.73■■□□□ 1.39
CHTOP-205ENST00000403433 CLTCQ00610 1675 aaKnown RBP23.73■■□□□ 1.39
CHTOP-205ENST00000403433 TULP4Q9NRJ4 1543 aa23.72■■□□□ 1.39
CHTOP-205ENST00000403433 EVC2Q86UK5 1308 aa23.72■■□□□ 1.39
CHTOP-205ENST00000403433 CCDC136Q96JN2 1154 aa23.71■■□□□ 1.39
CHTOP-205ENST00000403433 PPP6R1Q9UPN7 881 aa23.71■■□□□ 1.39
CHTOP-205ENST00000403433 PUS7Q96PZ0 661 aaKnown RBP23.7■■□□□ 1.38
CHTOP-205ENST00000403433 ARHGEF40Q8TER5 1519 aa23.68■■□□□ 1.38
CHTOP-205ENST00000403433 SLC12A5Q9H2X9 1139 aa23.68■■□□□ 1.38
CHTOP-205ENST00000403433 KIF13AQ9H1H9 1805 aa23.68■■□□□ 1.38
CHTOP-205ENST00000403433 FBXO31Q5XUX0 539 aaPredicted RBP23.67■■□□□ 1.38
CHTOP-205ENST00000403433 PLEKHH1Q9ULM0 1364 aa23.66■■□□□ 1.38
CHTOP-205ENST00000403433 SPATA31D1Q6ZQQ2 1576 aa23.65■■□□□ 1.38
CHTOP-205ENST00000403433 POLR3AO14802 1390 aaPredicted RBP23.63■■□□□ 1.37
CHTOP-205ENST00000403433 MORC1Q86VD1 984 aa23.63■■□□□ 1.37
CHTOP-205ENST00000403433 STAG3Q9UJ98 1225 aa23.63■■□□□ 1.37
CHTOP-205ENST00000403433 ANKRD36BQ8N2N9 1353 aa23.63■■□□□ 1.37
CHTOP-205ENST00000403433 PTPRMP28827 1452 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms