RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 ZC3H13Q5T200 1668 aaKnown RBP21.43■■□□□ 1.02
CDC42-203ENST00000400259 NPATQ14207 1427 aa21.43■■□□□ 1.02
CDC42-203ENST00000400259 PER1O15534 1290 aaPredicted RBP21.43■■□□□ 1.02
CDC42-203ENST00000400259 PPLO60437 1756 aa21.43■■□□□ 1.02
CDC42-203ENST00000400259 CFAP65Q6ZU64 1925 aaKnown RBP21.4■■□□□ 1.02
CDC42-203ENST00000400259 PNISRQ8TF01 805 aaKnown RBP21.4■■□□□ 1.02
CDC42-203ENST00000400259 LRPPRCP42704 1394 aaKnown RBP21.4■■□□□ 1.02
CDC42-203ENST00000400259 SYNMO15061 1565 aa21.4■■□□□ 1.02
CDC42-203ENST00000400259 EIF3AQ14152 1382 aaKnown RBP21.39■■□□□ 1.01
CDC42-203ENST00000400259 SIGLEC1Q9BZZ2 1709 aa21.39■■□□□ 1.01
CDC42-203ENST00000400259 PIK3C2BO00750 1634 aa21.38■■□□□ 1.01
CDC42-203ENST00000400259 MYO3AQ8NEV4 1616 aa21.38■■□□□ 1.01
CDC42-203ENST00000400259 SETBP1Q9Y6X0 1596 aa21.38■■□□□ 1.01
CDC42-203ENST00000400259 MYOM1P52179 1685 aa21.37■■□□□ 1.01
CDC42-203ENST00000400259 TMC1Q8TDI8 760 aa21.37■■□□□ 1.01
CDC42-203ENST00000400259 ZMYM4Q5VZL5 1548 aa21.37■■□□□ 1.01
CDC42-203ENST00000400259 DIP2BQ9P265 1576 aa21.36■■□□□ 1.01
CDC42-203ENST00000400259 RAPGEF3O95398 923 aa21.36■■□□□ 1.01
CDC42-203ENST00000400259 KDM5AP29375 1690 aaKnown RBP21.36■■□□□ 1.01
CDC42-203ENST00000400259 NOS1P29475 1434 aa21.35■■□□□ 1.01
CDC42-203ENST00000400259 ARHGAP31Q2M1Z3 1444 aa21.34■■□□□ 1.01
CDC42-203ENST00000400259 CNGB1Q14028 1251 aaPredicted RBP21.34■■□□□ 1.01
CDC42-203ENST00000400259 CDCA8Q53HL2 280 aa21.33■■□□□ 1.01
CDC42-203ENST00000400259 NLRP13Q86W25 1043 aa21.33■■□□□ 1.01
CDC42-203ENST00000400259 ADGRF5Q8IZF2 1346 aa21.33■■□□□ 1
CDC42-203ENST00000400259 GGT6Q6P531 493 aa21.32■■□□□ 1
CDC42-203ENST00000400259 PANK3Q9H999 370 aa21.32■■□□□ 1
CDC42-203ENST00000400259 SMG6Q86US8 1419 aaKnown RBP21.32■■□□□ 1
CDC42-203ENST00000400259 CYB5RLQ6IPT4 315 aa21.31■■□□□ 1
CDC42-203ENST00000400259 TSHZ2Q9NRE2 1034 aa21.31■■□□□ 1
CDC42-203ENST00000400259 SLC24A1O60721 1099 aa21.3■■□□□ 1
CDC42-203ENST00000400259 PIK3C2GO75747 1445 aa21.29■■□□□ 1
CDC42-203ENST00000400259 YEATS2Q9ULM3 1422 aa21.29■■□□□ 1
CDC42-203ENST00000400259 ERICH6BQ5W0A0 696 aa21.29■■□□□ 1
CDC42-203ENST00000400259 INSRP06213 1382 aa21.28■■□□□ 1
CDC42-203ENST00000400259 RPGRIP1LQ68CZ1 1315 aa21.28■■□□□ 1
CDC42-203ENST00000400259 CFAP70Q5T0N1 1121 aa21.28■■□□□ 1
CDC42-203ENST00000400259 SBNO2Q9Y2G9 1366 aa21.27■■□□□ 1
CDC42-203ENST00000400259 REREQ9P2R6 1566 aa21.26■□□□□ 0.99
CDC42-203ENST00000400259 ERVK-7P63135 1459 aa21.25■□□□□ 0.99
CDC42-203ENST00000400259 ADGRB1O14514 1584 aa21.25■□□□□ 0.99
CDC42-203ENST00000400259 PREX1Q8TCU6 1659 aa21.24■□□□□ 0.99
CDC42-203ENST00000400259 NEXMIFQ5QGS0 1516 aa21.24■□□□□ 0.99
CDC42-203ENST00000400259 TSPOAP1O95153 1857 aa21.23■□□□□ 0.99
CDC42-203ENST00000400259 ASXL1Q8IXJ9 1541 aa21.23■□□□□ 0.99
CDC42-203ENST00000400259 NPC1L1Q9UHC9 1359 aa21.22■□□□□ 0.99
CDC42-203ENST00000400259 QRICH2Q9H0J4 1663 aa21.22■□□□□ 0.99
CDC42-203ENST00000400259 NUDCQ9Y266 331 aa21.21■□□□□ 0.99
CDC42-203ENST00000400259 IRX6P78412 446 aaPredicted RBP21.21■□□□□ 0.99
CDC42-203ENST00000400259 CC2D1BQ5T0F9 858 aaKnown RBP21.21■□□□□ 0.99
CDC42-203ENST00000400259 C14orf93Q9H972 538 aaKnown RBP21.2■□□□□ 0.98
CDC42-203ENST00000400259 MYO5BQ9ULV0 1848 aa21.19■□□□□ 0.98
CDC42-203ENST00000400259 FAM69CQ0P6D2 419 aa21.18■□□□□ 0.98
CDC42-203ENST00000400259 AGLP35573 1532 aa21.18■□□□□ 0.98
CDC42-203ENST00000400259 BLMP54132 1417 aaPredicted RBP21.18■□□□□ 0.98
CDC42-203ENST00000400259 CHGAP10645 457 aaKnown RBP21.18■□□□□ 0.98
CDC42-203ENST00000400259 AMER1Q5JTC6 1135 aaPredicted RBP21.18■□□□□ 0.98
CDC42-203ENST00000400259 KNSTRNQ9Y448 316 aa21.18■□□□□ 0.98
CDC42-203ENST00000400259 ZFYVE9O95405 1425 aa21.17■□□□□ 0.98
CDC42-203ENST00000400259 TMEM131LA2VDJ0 1609 aa21.16■□□□□ 0.98
CDC42-203ENST00000400259 ARHGEF28Q8N1W1 1705 aaKnown RBP21.16■□□□□ 0.98
CDC42-203ENST00000400259 RNF123Q5XPI4 1314 aa21.15■□□□□ 0.98
CDC42-203ENST00000400259 KIF13AQ9H1H9 1805 aa21.14■□□□□ 0.98
CDC42-203ENST00000400259 SLC52A1Q9NWF4 448 aa21.14■□□□□ 0.97
CDC42-203ENST00000400259 CENPJQ9HC77 1338 aaPredicted RBP21.13■□□□□ 0.97
CDC42-203ENST00000400259 VGFO15240 615 aaPredicted RBP21.11■□□□□ 0.97
CDC42-203ENST00000400259 PPP4R2Q9NY27 417 aa21.1■□□□□ 0.97
CDC42-203ENST00000400259 PPP2R1AP30153 589 aa21.09■□□□□ 0.97
CDC42-203ENST00000400259 PDE3BQ13370 1112 aa21.09■□□□□ 0.97
CDC42-203ENST00000400259 IDI1Q13907 227 aa21.09■□□□□ 0.97
CDC42-203ENST00000400259 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
CDC42-203ENST00000400259 SENP3-EIF4A1A0A087X0R7 540 aa21.08■□□□□ 0.96
CDC42-203ENST00000400259 USP32Q8NFA0 1604 aa21.07■□□□□ 0.96
CDC42-203ENST00000400259 CLTCQ00610 1675 aaKnown RBP21.07■□□□□ 0.96
CDC42-203ENST00000400259 ARHGEF40Q8TER5 1519 aa21.06■□□□□ 0.96
CDC42-203ENST00000400259 TRAK1Q9UPV9 953 aa21.05■□□□□ 0.96
CDC42-203ENST00000400259 PUS7Q96PZ0 661 aaKnown RBP21.03■□□□□ 0.96
CDC42-203ENST00000400259 SPATA31D1Q6ZQQ2 1576 aa21.03■□□□□ 0.96
CDC42-203ENST00000400259 TMEM132EQ6IEE7 984 aa21.02■□□□□ 0.96
CDC42-203ENST00000400259 CARD14Q9BXL6 1004 aa21.02■□□□□ 0.95
CDC42-203ENST00000400259 TULP4Q9NRJ4 1543 aa21.01■□□□□ 0.95
CDC42-203ENST00000400259 ADAMTS8Q9UP79 889 aa20.98■□□□□ 0.95
CDC42-203ENST00000400259 NUTM2DQ5VT03 806 aaPredicted RBP20.95■□□□□ 0.95
CDC42-203ENST00000400259 WDR43Q15061 677 aaKnown RBP eCLIP20.95■□□□□ 0.94
CDC42-203ENST00000400259 FBXO31Q5XUX0 539 aaPredicted RBP20.95■□□□□ 0.94
CDC42-203ENST00000400259 ALKQ9UM73 1620 aa20.95■□□□□ 0.94
CDC42-203ENST00000400259 PTPRMP28827 1452 aa20.95■□□□□ 0.94
CDC42-203ENST00000400259 EVC2Q86UK5 1308 aa20.95■□□□□ 0.94
CDC42-203ENST00000400259 NSD3Q9BZ95 1437 aa20.95■□□□□ 0.94
CDC42-203ENST00000400259 SETD1AO15047 1707 aaKnown RBP20.93■□□□□ 0.94
CDC42-203ENST00000400259 RBM19Q9Y4C8 960 aaKnown RBP20.92■□□□□ 0.94
CDC42-203ENST00000400259 A2ML1A8K2U0 1454 aa20.91■□□□□ 0.94
CDC42-203ENST00000400259 RCAN3Q9UKA8 241 aa20.91■□□□□ 0.94
CDC42-203ENST00000400259 POLR3AO14802 1390 aaPredicted RBP20.91■□□□□ 0.94
CDC42-203ENST00000400259 SALL2Q9Y467 1007 aaPredicted RBP20.9■□□□□ 0.94
CDC42-203ENST00000400259 SHPRHQ149N8 1683 aa20.9■□□□□ 0.94
CDC42-203ENST00000400259 NINLQ9Y2I6 1382 aa20.9■□□□□ 0.94
CDC42-203ENST00000400259 YTHDC2Q9H6S0 1430 aaKnown RBP20.9■□□□□ 0.94
CDC42-203ENST00000400259 SLC12A5Q9H2X9 1139 aa20.9■□□□□ 0.94
CDC42-203ENST00000400259 ANKRD36BQ8N2N9 1353 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms