RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 ABCA5Q8WWZ7 1642 aa17.2■□□□□ 0.34
RUNX3-203ENST00000399916 MCM4P33991 863 aa17.19■□□□□ 0.34
RUNX3-203ENST00000399916 DRC7Q8IY82 874 aa17.19■□□□□ 0.34
RUNX3-203ENST00000399916 IQGAP2Q13576 1575 aa17.18■□□□□ 0.34
RUNX3-203ENST00000399916 SUPT6HQ7KZ85 1726 aaKnown RBP17.18■□□□□ 0.34
RUNX3-203ENST00000399916 MTERF4Q7Z6M4 381 aaKnown RBP17.18■□□□□ 0.34
RUNX3-203ENST00000399916 ADAMTS12P58397 1594 aa17.17■□□□□ 0.34
RUNX3-203ENST00000399916 PDE3BQ13370 1112 aa17.17■□□□□ 0.34
RUNX3-203ENST00000399916 EHBP1L1Q8N3D4 1523 aa17.17■□□□□ 0.34
RUNX3-203ENST00000399916 SPDYE4A6NLX3 237 aa17.16■□□□□ 0.34
RUNX3-203ENST00000399916 RPRD2Q5VT52 1461 aaKnown RBP17.15■□□□□ 0.34
RUNX3-203ENST00000399916 CDK13Q14004 1512 aaKnown RBP17.15■□□□□ 0.34
RUNX3-203ENST00000399916 ERICH4A6NGS2 130 aa17.14■□□□□ 0.33
RUNX3-203ENST00000399916 PANK3Q9H999 370 aa17.14■□□□□ 0.33
RUNX3-203ENST00000399916 KNSTRNQ9Y448 316 aa17.14■□□□□ 0.33
RUNX3-203ENST00000399916 CSPP1Q1MSJ5 1256 aa17.13■□□□□ 0.33
RUNX3-203ENST00000399916 C20orf194Q5TEA3 1177 aa17.13■□□□□ 0.33
RUNX3-203ENST00000399916 ZSCAN30Q86W11 494 aa17.13■□□□□ 0.33
RUNX3-203ENST00000399916 PBRM1Q86U86 1689 aa17.13■□□□□ 0.33
RUNX3-203ENST00000399916 DHX29Q7Z478 1369 aaKnown RBP17.13■□□□□ 0.33
RUNX3-203ENST00000399916 COG6Q9Y2V7 657 aa17.12■□□□□ 0.33
RUNX3-203ENST00000399916 BRD4O60885 1362 aaPredicted RBP17.12■□□□□ 0.33
RUNX3-203ENST00000399916 CCDC146Q8IYE0 955 aa17.11■□□□□ 0.33
RUNX3-203ENST00000399916 RNF123Q5XPI4 1314 aa17.1■□□□□ 0.33
RUNX3-203ENST00000399916 TAF7LQ5H9L4 462 aa17.1■□□□□ 0.33
RUNX3-203ENST00000399916 ZNF592Q92610 1267 aa17.1■□□□□ 0.33
RUNX3-203ENST00000399916 DAPK1P53355 1430 aa17.1■□□□□ 0.33
RUNX3-203ENST00000399916 CAVIN1Q6NZI2 390 aaKnown RBP17.1■□□□□ 0.33
RUNX3-203ENST00000399916 BCL2L13Q9BXK5 485 aa17.1■□□□□ 0.33
RUNX3-203ENST00000399916 ANKRD30AQ9BXX3 1397 aa17.09■□□□□ 0.33
RUNX3-203ENST00000399916 KCNJ4P48050 445 aa17.09■□□□□ 0.33
RUNX3-203ENST00000399916 HNRNPMP52272 730 aaKnown RBP eCLIP17.08■□□□□ 0.33
RUNX3-203ENST00000399916 SKOR2Q2VWA4 1001 aaPredicted RBP17.08■□□□□ 0.33
RUNX3-203ENST00000399916 NBPF1Q3BBV0 1214 aa17.08■□□□□ 0.33
RUNX3-203ENST00000399916 NOL8Q76FK4 1167 aaKnown RBP17.08■□□□□ 0.33
RUNX3-203ENST00000399916 CCDC173Q0VFZ6 552 aa17.08■□□□□ 0.32
RUNX3-203ENST00000399916 KDM5BQ9UGL1 1544 aa17.08■□□□□ 0.32
RUNX3-203ENST00000399916 MIA2Q96PC5 1412 aa17.07■□□□□ 0.32
RUNX3-203ENST00000399916 KDM6BO15054 1643 aa17.07■□□□□ 0.32
RUNX3-203ENST00000399916 MCTP1Q6DN14 999 aa17.07■□□□□ 0.32
RUNX3-203ENST00000399916 TMF1P82094 1093 aa17.07■□□□□ 0.32
RUNX3-203ENST00000399916 ADAMTS8Q9UP79 889 aa17.07■□□□□ 0.32
RUNX3-203ENST00000399916 EPRSP07814 1512 aaKnown RBP17.06■□□□□ 0.32
RUNX3-203ENST00000399916 ABCC5O15440 1437 aa17.06■□□□□ 0.32
RUNX3-203ENST00000399916 UGGT2Q9NYU1 1516 aa17.05■□□□□ 0.32
RUNX3-203ENST00000399916 FAM177BA6PVY3 158 aa17.05■□□□□ 0.32
RUNX3-203ENST00000399916 GOLGA2Q08379 1002 aa17.04■□□□□ 0.32
RUNX3-203ENST00000399916 NUP160Q12769 1436 aa17.04■□□□□ 0.32
RUNX3-203ENST00000399916 NPHP1O15259 732 aa17.03■□□□□ 0.32
RUNX3-203ENST00000399916 KIAA1107Q9UPP5 1409 aa17.03■□□□□ 0.32
RUNX3-203ENST00000399916 C22orf23Q9BZE7 217 aa17.03■□□□□ 0.32
RUNX3-203ENST00000399916 SPATA31E1Q6ZUB1 1445 aa17.03■□□□□ 0.32
RUNX3-203ENST00000399916 PPP4R3BQ5MIZ7 849 aa17.03■□□□□ 0.32
RUNX3-203ENST00000399916 DENND4BO75064 1496 aaPredicted RBP17.02■□□□□ 0.32
RUNX3-203ENST00000399916 U2SURPO15042 1029 aaKnown RBP17.02■□□□□ 0.32
RUNX3-203ENST00000399916 PLB1Q6P1J6 1458 aa17.02■□□□□ 0.32
RUNX3-203ENST00000399916 APBB1O00213 710 aa17.02■□□□□ 0.32
RUNX3-203ENST00000399916 CCDC66A2RUB6 948 aa17.01■□□□□ 0.31
RUNX3-203ENST00000399916 RWDD1Q9H446 243 aaPredicted RBP17.01■□□□□ 0.31
RUNX3-203ENST00000399916 ANKRD50Q9ULJ7 1429 aa17.01■□□□□ 0.31
RUNX3-203ENST00000399916 CERS3Q8IU89 383 aa17■□□□□ 0.31
RUNX3-203ENST00000399916 TEX14Q8IWB6 1497 aa17■□□□□ 0.31
RUNX3-203ENST00000399916 MAGI3Q5TCQ9 1506 aa17■□□□□ 0.31
RUNX3-203ENST00000399916 MAPK8IP3Q9UPT6 1336 aa16.99■□□□□ 0.31
RUNX3-203ENST00000399916 EFCAB2Q5VUJ9 269 aa16.99■□□□□ 0.31
RUNX3-203ENST00000399916 PDCL2Q8N4E4 241 aa16.99■□□□□ 0.31
RUNX3-203ENST00000399916 ROCK1Q13464 1354 aa16.98■□□□□ 0.31
RUNX3-203ENST00000399916 FAM69CQ0P6D2 419 aa16.98■□□□□ 0.31
RUNX3-203ENST00000399916 APAF1O14727 1248 aa16.97■□□□□ 0.31
RUNX3-203ENST00000399916 CEP170Q5SW79 1584 aa16.96■□□□□ 0.31
RUNX3-203ENST00000399916 PANK1Q8TE04 598 aa16.96■□□□□ 0.31
RUNX3-203ENST00000399916 TBC1D2Q9BYX2 928 aa16.96■□□□□ 0.31
RUNX3-203ENST00000399916 HECW1Q76N89 1606 aa16.96■□□□□ 0.31
RUNX3-203ENST00000399916 RBM25P49756 843 aaKnown RBP16.95■□□□□ 0.3
RUNX3-203ENST00000399916 SMAP1Q8IYB5 467 aaPredicted RBP16.95■□□□□ 0.3
RUNX3-203ENST00000399916 TSC1Q92574 1164 aa16.95■□□□□ 0.3
RUNX3-203ENST00000399916 CCDC39Q9UFE4 941 aa16.95■□□□□ 0.3
RUNX3-203ENST00000399916 PMFBP1Q8TBY8 1022 aa16.95■□□□□ 0.3
RUNX3-203ENST00000399916 CTTNBP2Q8WZ74 1663 aa16.94■□□□□ 0.3
RUNX3-203ENST00000399916 PATL2C9JE40 543 aaKnown RBP16.94■□□□□ 0.3
RUNX3-203ENST00000399916 IRX3P78415 501 aaPredicted RBP16.94■□□□□ 0.3
RUNX3-203ENST00000399916 BCAR3O75815 825 aa16.94■□□□□ 0.3
RUNX3-203ENST00000399916 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
RUNX3-203ENST00000399916 ITPRIPQ8IWB1 547 aa16.94■□□□□ 0.3
RUNX3-203ENST00000399916 KIF3AQ9Y496 699 aa16.93■□□□□ 0.3
RUNX3-203ENST00000399916 TCOF1Q13428 1488 aaKnown RBP16.93■□□□□ 0.3
RUNX3-203ENST00000399916 PRPF40AO75400 957 aaKnown RBP16.93■□□□□ 0.3
RUNX3-203ENST00000399916 ESF1Q9H501 851 aaKnown RBP16.92■□□□□ 0.3
RUNX3-203ENST00000399916 SASS6Q6UVJ0 657 aa16.92■□□□□ 0.3
RUNX3-203ENST00000399916 CCDC144AA2RUR9 1427 aa16.92■□□□□ 0.3
RUNX3-203ENST00000399916 GOLGA6L6A8MZA4 724 aa16.92■□□□□ 0.3
RUNX3-203ENST00000399916 LRPPRCP42704 1394 aaKnown RBP16.92■□□□□ 0.3
RUNX3-203ENST00000399916 HMGN5P82970 282 aaKnown RBP16.91■□□□□ 0.3
RUNX3-203ENST00000399916 SYAP1Q96A49 352 aaPredicted RBP16.91■□□□□ 0.3
RUNX3-203ENST00000399916 SENP3Q9H4L4 574 aaPredicted RBP16.9■□□□□ 0.3
RUNX3-203ENST00000399916 TAOK2Q9UL54 1235 aa16.9■□□□□ 0.3
RUNX3-203ENST00000399916 CHGAP10645 457 aaKnown RBP16.9■□□□□ 0.3
RUNX3-203ENST00000399916 RRP7AQ9Y3A4 280 aaKnown RBP16.9■□□□□ 0.3
RUNX3-203ENST00000399916 CHD1O14646 1710 aa16.9■□□□□ 0.3
RUNX3-203ENST00000399916 DYNC1I1O14576 645 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms