RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 PLPPR3Q6T4P5 718 aa23.26■■□□□ 1.31
TNRC18-202ENST00000399434 CEP170BQ9Y4F5 1589 aaPredicted RBP23.26■■□□□ 1.31
TNRC18-202ENST00000399434 KDM2AQ9Y2K7 1162 aa23.25■■□□□ 1.31
TNRC18-202ENST00000399434 KIAA1210Q9ULL0 1709 aa23.24■■□□□ 1.31
TNRC18-202ENST00000399434 ZFYVE9O95405 1425 aa23.23■■□□□ 1.31
TNRC18-202ENST00000399434 ZNF326Q5BKZ1 582 aaKnown RBP23.21■■□□□ 1.31
TNRC18-202ENST00000399434 RPGRIP1LQ68CZ1 1315 aa23.21■■□□□ 1.31
TNRC18-202ENST00000399434 ADGRF5Q8IZF2 1346 aa23.2■■□□□ 1.3
TNRC18-202ENST00000399434 LAMC1P11047 1609 aa23.2■■□□□ 1.3
TNRC18-202ENST00000399434 PIK3C2GO75747 1445 aa23.19■■□□□ 1.3
TNRC18-202ENST00000399434 SETD1BQ9UPS6 1966 aaKnown RBP23.19■■□□□ 1.3
TNRC18-202ENST00000399434 RIMS2Q9UQ26 1411 aa23.18■■□□□ 1.3
TNRC18-202ENST00000399434 SLIT1O75093 1534 aa23.17■■□□□ 1.3
TNRC18-202ENST00000399434 ARHGAP23Q9P227 1491 aa23.16■■□□□ 1.3
TNRC18-202ENST00000399434 NRXN3Q9Y4C0 1643 aa23.16■■□□□ 1.3
TNRC18-202ENST00000399434 SETD1AO15047 1707 aaKnown RBP23.15■■□□□ 1.3
TNRC18-202ENST00000399434 STAC3Q96MF2 364 aa23.15■■□□□ 1.3
TNRC18-202ENST00000399434 TMEM2Q9UHN6 1383 aa23.14■■□□□ 1.29
TNRC18-202ENST00000399434 STAG3Q9UJ98 1225 aa23.14■■□□□ 1.29
TNRC18-202ENST00000399434 IQGAP1P46940 1657 aa23.13■■□□□ 1.29
TNRC18-202ENST00000399434 GPRASP1Q5JY77 1395 aa23.13■■□□□ 1.29
TNRC18-202ENST00000399434 NUTM2DQ5VT03 806 aaPredicted RBP23.12■■□□□ 1.29
TNRC18-202ENST00000399434 ASXL1Q8IXJ9 1541 aa23.11■■□□□ 1.29
TNRC18-202ENST00000399434 ADGRB1O14514 1584 aa23.1■■□□□ 1.29
TNRC18-202ENST00000399434 SETBP1Q9Y6X0 1596 aa23.1■■□□□ 1.29
TNRC18-202ENST00000399434 NBPF1Q3BBV0 1214 aa23.09■■□□□ 1.29
TNRC18-202ENST00000399434 ROCK2O75116 1388 aaKnown RBP23.08■■□□□ 1.28
TNRC18-202ENST00000399434 ALKQ9UM73 1620 aa23.07■■□□□ 1.28
TNRC18-202ENST00000399434 VGFO15240 615 aaPredicted RBP23.06■■□□□ 1.28
TNRC18-202ENST00000399434 CFAP70Q5T0N1 1121 aa23.05■■□□□ 1.28
TNRC18-202ENST00000399434 POLR1AO95602 1720 aaPredicted RBP23.03■■□□□ 1.28
TNRC18-202ENST00000399434 USP47Q96K76 1375 aa23.03■■□□□ 1.28
TNRC18-202ENST00000399434 LTKP29376 864 aa23.02■■□□□ 1.28
TNRC18-202ENST00000399434 C14orf93Q9H972 538 aaKnown RBP23.02■■□□□ 1.28
TNRC18-202ENST00000399434 SCAF11Q99590 1463 aaKnown RBP23.01■■□□□ 1.27
TNRC18-202ENST00000399434 THEMISQ8N1K5 641 aaPredicted RBP23■■□□□ 1.27
TNRC18-202ENST00000399434 ABCF1Q8NE71 845 aaKnown RBP eCLIP23■■□□□ 1.27
TNRC18-202ENST00000399434 CARD11Q9BXL7 1154 aa23■■□□□ 1.27
TNRC18-202ENST00000399434 HSPA5P11021 654 aaKnown RBP22.99■■□□□ 1.27
TNRC18-202ENST00000399434 PLEKHG1Q9ULL1 1385 aa22.99■■□□□ 1.27
TNRC18-202ENST00000399434 ARHGEF28Q8N1W1 1705 aaKnown RBP22.99■■□□□ 1.27
TNRC18-202ENST00000399434 ADAMTS13Q76LX8 1427 aa22.99■■□□□ 1.27
TNRC18-202ENST00000399434 LMTK3Q96Q04 1460 aa22.98■■□□□ 1.27
TNRC18-202ENST00000399434 SENP3Q9H4L4 574 aaPredicted RBP22.98■■□□□ 1.27
TNRC18-202ENST00000399434 MED14O60244 1454 aa22.97■■□□□ 1.27
TNRC18-202ENST00000399434 HIRIP3Q9BW71 556 aaPredicted RBP22.97■■□□□ 1.27
TNRC18-202ENST00000399434 ZNF316A6NFI3 1004 aaPredicted RBP22.96■■□□□ 1.27
TNRC18-202ENST00000399434 EIF4G2P78344 907 aaKnown RBP eCLIP22.96■■□□□ 1.271e-6■■□□□ 13.8
TNRC18-202ENST00000399434 TXNDC2Q86VQ3 553 aa22.94■■□□□ 1.26
TNRC18-202ENST00000399434 DIP2AQ14689 1571 aa22.94■■□□□ 1.26
TNRC18-202ENST00000399434 KNDC1Q76NI1 1749 aa22.92■■□□□ 1.26
TNRC18-202ENST00000399434 HDGFP51858 240 aaKnown RBP22.92■■□□□ 1.26
TNRC18-202ENST00000399434 TMEM132EQ6IEE7 984 aa22.92■■□□□ 1.26
TNRC18-202ENST00000399434 EID1Q9Y6B2 187 aa22.9■■□□□ 1.26
TNRC18-202ENST00000399434 METP08581 1390 aa22.89■■□□□ 1.26
TNRC18-202ENST00000399434 QRICH2Q9H0J4 1663 aa22.89■■□□□ 1.26
TNRC18-202ENST00000399434 YTHDC2Q9H6S0 1430 aaKnown RBP22.89■■□□□ 1.25
TNRC18-202ENST00000399434 STRCQ7RTU9 1775 aa22.86■■□□□ 1.25
TNRC18-202ENST00000399434 ST20-MTHFSA0A0A6YYL1 179 aa22.85■■□□□ 1.25
TNRC18-202ENST00000399434 XRN1Q8IZH2 1706 aaKnown RBP22.85■■□□□ 1.25
TNRC18-202ENST00000399434 CPS1P31327 1500 aa22.85■■□□□ 1.25
TNRC18-202ENST00000399434 DLC1Q96QB1 1528 aa22.85■■□□□ 1.25
TNRC18-202ENST00000399434 NPHP4O75161 1426 aaPredicted RBP22.84■■□□□ 1.25
TNRC18-202ENST00000399434 ANKLE2Q86XL3 938 aa22.84■■□□□ 1.25
TNRC18-202ENST00000399434 LRPPRCP42704 1394 aaKnown RBP22.84■■□□□ 1.25
TNRC18-202ENST00000399434 PTPRUQ92729 1446 aa22.83■■□□□ 1.25
TNRC18-202ENST00000399434 EIF3AQ14152 1382 aaKnown RBP22.83■■□□□ 1.24
TNRC18-202ENST00000399434 C11orf95C9JLR9 678 aaPredicted RBP22.82■■□□□ 1.24
TNRC18-202ENST00000399434 TESK2Q96S53 571 aa22.82■■□□□ 1.24
TNRC18-202ENST00000399434 TECPR2O15040 1411 aa22.82■■□□□ 1.24
TNRC18-202ENST00000399434 HSPA2P54652 639 aa22.81■■□□□ 1.24
TNRC18-202ENST00000399434 CHD2O14647 1828 aaKnown RBP22.8■■□□□ 1.24
TNRC18-202ENST00000399434 SLC26A8Q96RN1 970 aa22.8■■□□□ 1.24
TNRC18-202ENST00000399434 TRAK1Q9UPV9 953 aa22.8■■□□□ 1.24
TNRC18-202ENST00000399434 NCKAP5LQ9HCH0 1330 aa22.8■■□□□ 1.24
TNRC18-202ENST00000399434 BCANQ96GW7 911 aa22.79■■□□□ 1.24
TNRC18-202ENST00000399434 TBX22Q9Y458 520 aa22.79■■□□□ 1.24
TNRC18-202ENST00000399434 WASHC2AQ641Q2 1341 aa22.78■■□□□ 1.24
TNRC18-202ENST00000399434 ABCC11Q96J66 1382 aa22.78■■□□□ 1.24
TNRC18-202ENST00000399434 DISP3Q9P2K9 1392 aa22.77■■□□□ 1.24
TNRC18-202ENST00000399434 AEBP2Q6ZN18 517 aaPredicted RBP22.77■■□□□ 1.24
TNRC18-202ENST00000399434 STK26Q9P289 416 aa22.77■■□□□ 1.24
TNRC18-202ENST00000399434 CCDC7Q96M83 1385 aa22.76■■□□□ 1.23
TNRC18-202ENST00000399434 SBNO2Q9Y2G9 1366 aa22.76■■□□□ 1.23
TNRC18-202ENST00000399434 CENPJQ9HC77 1338 aaPredicted RBP22.75■■□□□ 1.23
TNRC18-202ENST00000399434 NWD1Q149M9 1564 aa22.75■■□□□ 1.23
TNRC18-202ENST00000399434 TULP4Q9NRJ4 1543 aa22.74■■□□□ 1.23
TNRC18-202ENST00000399434 KIF7Q2M1P5 1343 aa22.74■■□□□ 1.23
TNRC18-202ENST00000399434 PIK3R4Q99570 1358 aa22.73■■□□□ 1.23
TNRC18-202ENST00000399434 PLEKHH1Q9ULM0 1364 aa22.73■■□□□ 1.23
TNRC18-202ENST00000399434 ROBO2Q9HCK4 1378 aa22.72■■□□□ 1.23
TNRC18-202ENST00000399434 MYOM1P52179 1685 aa22.72■■□□□ 1.23
TNRC18-202ENST00000399434 PTCH1Q13635 1447 aa22.72■■□□□ 1.23
TNRC18-202ENST00000399434 FAM135BQ49AJ0 1406 aa22.71■■□□□ 1.23
TNRC18-202ENST00000399434 STRCP1A6NGW2 1772 aa22.71■■□□□ 1.23
TNRC18-202ENST00000399434 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.7■■□□□ 1.22
TNRC18-202ENST00000399434 PRAM1Q96QH2 718 aa22.69■■□□□ 1.22
TNRC18-202ENST00000399434 ADGRB2O60241 1585 aa22.67■■□□□ 1.22
TNRC18-202ENST00000399434 SIRT1Q96EB6 747 aa22.66■■□□□ 1.22
TNRC18-202ENST00000399434 WAPLQ7Z5K2 1190 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms