RNA–Protein interactions for RNA: ENST00000399367.7

ITSN1-212, Transcript of intersectin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITSN1, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-212ENST00000399367 FOXD4L3Q6VB84 417 aaPredicted RBP18.44■□□□□ 0.54
ITSN1-212ENST00000399367 E9PSI1 815 aa18.44■□□□□ 0.54
ITSN1-212ENST00000399367 SYNE3Q6ZMZ3 975 aa18.44■□□□□ 0.54
ITSN1-212ENST00000399367 COG6Q9Y2V7 657 aa18.44■□□□□ 0.54
ITSN1-212ENST00000399367 FKBP5Q13451 457 aaPredicted RBP18.43■□□□□ 0.54
ITSN1-212ENST00000399367 WWC1Q8IX03 1113 aa18.43■□□□□ 0.54
ITSN1-212ENST00000399367 USP47Q96K76 1375 aa18.43■□□□□ 0.54
ITSN1-212ENST00000399367 CEP89Q96ST8 783 aa18.42■□□□□ 0.54
ITSN1-212ENST00000399367 DDX58O95786 925 aaKnown RBP18.42■□□□□ 0.54
ITSN1-212ENST00000399367 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
ITSN1-212ENST00000399367 DHX16O60231 1041 aaKnown RBP18.42■□□□□ 0.54
ITSN1-212ENST00000399367 ARID3AQ99856 593 aa18.41■□□□□ 0.54
ITSN1-212ENST00000399367 TCEAL9Q9UHQ7 104 aa18.41■□□□□ 0.54
ITSN1-212ENST00000399367 HMOX1P09601 288 aa18.41■□□□□ 0.54
ITSN1-212ENST00000399367 IFIT2P09913 472 aaKnown RBP18.41■□□□□ 0.54
ITSN1-212ENST00000399367 LRRFIP1Q32MZ4 808 aaKnown RBP18.4■□□□□ 0.54
ITSN1-212ENST00000399367 MCTP1Q6DN14 999 aa18.4■□□□□ 0.54
ITSN1-212ENST00000399367 ZNF644Q9H582 1327 aaPredicted RBP18.4■□□□□ 0.54
ITSN1-212ENST00000399367 TPD52L1Q16890 204 aaPredicted RBP18.39■□□□□ 0.53
ITSN1-212ENST00000399367 SAMD1Q6SPF0 538 aaPredicted RBP18.39■□□□□ 0.53
ITSN1-212ENST00000399367 AIMP1Q12904 312 aaKnown RBP18.38■□□□□ 0.53
ITSN1-212ENST00000399367 TSPYL4Q9UJ04 414 aa18.38■□□□□ 0.53
ITSN1-212ENST00000399367 A0A0U1RQG5 324 aaPredicted RBP18.38■□□□□ 0.53
ITSN1-212ENST00000399367 TMEM132EQ6IEE7 984 aa18.38■□□□□ 0.53
ITSN1-212ENST00000399367 GGNBP2Q9H3C7 697 aa18.38■□□□□ 0.53
ITSN1-212ENST00000399367 NLRP6P59044 892 aa18.37■□□□□ 0.53
ITSN1-212ENST00000399367 G3BP1Q13283 466 aaKnown RBP eCLIP18.37■□□□□ 0.53
ITSN1-212ENST00000399367 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
ITSN1-212ENST00000399367 GOLGA6L3A6NEY3 463 aa18.37■□□□□ 0.53
ITSN1-212ENST00000399367 RBM33Q96EV2 1170 aaKnown RBP18.37■□□□□ 0.53
ITSN1-212ENST00000399367 CABP2Q9NPB3 220 aa18.37■□□□□ 0.53
ITSN1-212ENST00000399367 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
ITSN1-212ENST00000399367 CPLX2Q6PUV4 134 aaKnown RBP18.36■□□□□ 0.53
ITSN1-212ENST00000399367 GAPVD1Q14C86 1478 aa18.35■□□□□ 0.53
ITSN1-212ENST00000399367 TPM3P06753 285 aa18.35■□□□□ 0.53
ITSN1-212ENST00000399367 DHX57Q6P158 1386 aaKnown RBP18.35■□□□□ 0.53
ITSN1-212ENST00000399367 RUFY2Q8WXA3 655 aa18.34■□□□□ 0.53
ITSN1-212ENST00000399367 CRBNQ96SW2 442 aa18.34■□□□□ 0.53
ITSN1-212ENST00000399367 RIC3Q7Z5B4 369 aa18.34■□□□□ 0.53
ITSN1-212ENST00000399367 EXOC6Q8TAG9 804 aa18.34■□□□□ 0.53
ITSN1-212ENST00000399367 ZKSCAN1P17029 563 aaPredicted RBP18.34■□□□□ 0.53
ITSN1-212ENST00000399367 CWC22Q9HCG8 908 aaKnown RBP18.34■□□□□ 0.53
ITSN1-212ENST00000399367 CENPQQ7L2Z9 268 aaPredicted RBP18.33■□□□□ 0.53
ITSN1-212ENST00000399367 API5Q9BZZ5 524 aaKnown RBP18.33■□□□□ 0.53
ITSN1-212ENST00000399367 CPLX1O14810 134 aa18.33■□□□□ 0.52
ITSN1-212ENST00000399367 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.52
ITSN1-212ENST00000399367 TRIM29Q14134 588 aa18.32■□□□□ 0.52
ITSN1-212ENST00000399367 ESCO1Q5FWF5 840 aa18.32■□□□□ 0.52
ITSN1-212ENST00000399367 CHMP4CQ96CF2 233 aa18.32■□□□□ 0.52
ITSN1-212ENST00000399367 ANO2Q9NQ90 1003 aa18.32■□□□□ 0.52
ITSN1-212ENST00000399367 FAM177BA6PVY3 158 aa18.32■□□□□ 0.52
ITSN1-212ENST00000399367 TRDNQ13061 729 aa18.32■□□□□ 0.52
ITSN1-212ENST00000399367 AFAP1Q8N556 730 aa18.32■□□□□ 0.52
ITSN1-212ENST00000399367 NEUROD6Q96NK8 337 aa18.32■□□□□ 0.52
ITSN1-212ENST00000399367 DDX19BQ9UMR2 479 aa18.32■□□□□ 0.52
ITSN1-212ENST00000399367 PHF14O94880 888 aa18.32■□□□□ 0.52
ITSN1-212ENST00000399367 PROSER2Q86WR7 435 aaPredicted RBP18.31■□□□□ 0.52
ITSN1-212ENST00000399367 TXNDC2Q86VQ3 553 aa18.3■□□□□ 0.52
ITSN1-212ENST00000399367 DZIP1LQ8IYY4 767 aaKnown RBP18.3■□□□□ 0.52
ITSN1-212ENST00000399367 ABTB2Q8N961 1025 aa18.3■□□□□ 0.52
ITSN1-212ENST00000399367 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.3■□□□□ 0.52
ITSN1-212ENST00000399367 NFXL1Q6ZNB6 911 aa18.3■□□□□ 0.52
ITSN1-212ENST00000399367 FYB1O15117 783 aa18.3■□□□□ 0.52
ITSN1-212ENST00000399367 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.52
ITSN1-212ENST00000399367 RRP1P56182 461 aaKnown RBP18.29■□□□□ 0.52
ITSN1-212ENST00000399367 MYOM3Q5VTT5 1437 aa18.29■□□□□ 0.52
ITSN1-212ENST00000399367 SLC4A3P48751 1232 aa18.29■□□□□ 0.52
ITSN1-212ENST00000399367 STRN4Q9NRL3 753 aa18.29■□□□□ 0.52
ITSN1-212ENST00000399367 TSR1Q2NL82 804 aaKnown RBP18.29■□□□□ 0.52
ITSN1-212ENST00000399367 RUNDC1Q96C34 613 aa18.28■□□□□ 0.52
ITSN1-212ENST00000399367 ATP6V1DQ9Y5K8 247 aa18.28■□□□□ 0.52
ITSN1-212ENST00000399367 FGD5Q6ZNL6 1462 aa18.28■□□□□ 0.52
ITSN1-212ENST00000399367 GNAI1P63096 354 aa18.28■□□□□ 0.52
ITSN1-212ENST00000399367 CCDC27Q2M243 656 aa18.28■□□□□ 0.52
ITSN1-212ENST00000399367 BECN2A8MW95 431 aa18.27■□□□□ 0.52
ITSN1-212ENST00000399367 REC8O95072 547 aa18.27■□□□□ 0.51
ITSN1-212ENST00000399367 FAM161AQ3B820 660 aa18.27■□□□□ 0.51
ITSN1-212ENST00000399367 ERICH2A1L162 156 aa18.26■□□□□ 0.51
ITSN1-212ENST00000399367 DDX49Q9Y6V7 483 aaKnown RBP18.26■□□□□ 0.51
ITSN1-212ENST00000399367 GOLGA6L19H0YKK7 550 aa18.26■□□□□ 0.51
ITSN1-212ENST00000399367 PPP1R1BQ9UD71 204 aaPredicted RBP18.26■□□□□ 0.51
ITSN1-212ENST00000399367 RBM42Q9BTD8 480 aaKnown RBP18.26■□□□□ 0.51
ITSN1-212ENST00000399367 GPRASP1Q5JY77 1395 aa18.25■□□□□ 0.51
ITSN1-212ENST00000399367 IGF1RP08069 1367 aa18.25■□□□□ 0.51
ITSN1-212ENST00000399367 WASHC4Q2M389 1173 aa18.25■□□□□ 0.51
ITSN1-212ENST00000399367 TPM2P07951 284 aa18.25■□□□□ 0.51
ITSN1-212ENST00000399367 NUTM2BA6NNL0 878 aaPredicted RBP18.24■□□□□ 0.51
ITSN1-212ENST00000399367 NUTM2EB1AL46 878 aaPredicted RBP18.24■□□□□ 0.51
ITSN1-212ENST00000399367 RNF20Q5VTR2 975 aa18.24■□□□□ 0.51
ITSN1-212ENST00000399367 NUTM2AQ8IVF1 878 aaPredicted RBP18.24■□□□□ 0.51
ITSN1-212ENST00000399367 MTMR7Q9Y216 660 aa18.24■□□□□ 0.51
ITSN1-212ENST00000399367 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
ITSN1-212ENST00000399367 CCDC43Q96MW1 224 aaKnown RBP18.23■□□□□ 0.51
ITSN1-212ENST00000399367 PCMTD1Q96MG8 357 aaPredicted RBP18.23■□□□□ 0.51
ITSN1-212ENST00000399367 MIA2Q96PC5 1412 aa18.23■□□□□ 0.51
ITSN1-212ENST00000399367 PDE4AP27815 886 aa18.23■□□□□ 0.51
ITSN1-212ENST00000399367 FOSBP53539 338 aa18.23■□□□□ 0.51
ITSN1-212ENST00000399367 GOLGA6L1Q8N7Z2 621 aa18.23■□□□□ 0.51
ITSN1-212ENST00000399367 CNKSR2Q8WXI2 1034 aa18.22■□□□□ 0.51
ITSN1-212ENST00000399367 ROCK1Q13464 1354 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms