RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ST20-MTHFSA0A0A6YYL1 179 aa10.24□□□□□ -0.77
SPTLC3-201ENST00000399002 DIAPH3Q9NSV4 1193 aa10.24□□□□□ -0.77
SPTLC3-201ENST00000399002 NEXNQ0ZGT2 675 aa10.23□□□□□ -0.77
SPTLC3-201ENST00000399002 TRHP20396 242 aaPredicted RBP10.23□□□□□ -0.77
SPTLC3-201ENST00000399002 NUCB2P80303 420 aa10.23□□□□□ -0.77
SPTLC3-201ENST00000399002 CHMP5Q9NZZ3 219 aa10.23□□□□□ -0.77
SPTLC3-201ENST00000399002 CCDC7Q96M83 1385 aa10.23□□□□□ -0.77
SPTLC3-201ENST00000399002 DDX58O95786 925 aaKnown RBP10.23□□□□□ -0.77
SPTLC3-201ENST00000399002 ZKSCAN1P17029 563 aaPredicted RBP10.23□□□□□ -0.77
SPTLC3-201ENST00000399002 INTS3Q68E01 1043 aaKnown RBP10.23□□□□□ -0.77
SPTLC3-201ENST00000399002 HECW1Q76N89 1606 aa10.23□□□□□ -0.77
SPTLC3-201ENST00000399002 DIAPH1O60610 1272 aaKnown RBP10.22□□□□□ -0.77
SPTLC3-201ENST00000399002 TRIM29Q14134 588 aa10.22□□□□□ -0.77
SPTLC3-201ENST00000399002 ANKRD45Q5TZF3 282 aa10.22□□□□□ -0.77
SPTLC3-201ENST00000399002 ANKRD20A12PQ8NF67 263 aa10.22□□□□□ -0.77
SPTLC3-201ENST00000399002 CRBNQ96SW2 442 aa10.22□□□□□ -0.77
SPTLC3-201ENST00000399002 DDX49Q9Y6V7 483 aaKnown RBP10.22□□□□□ -0.77
SPTLC3-201ENST00000399002 G3V3G9 751 aa10.22□□□□□ -0.77
SPTLC3-201ENST00000399002 DCAF8Q5TAQ9 597 aa10.22□□□□□ -0.77
SPTLC3-201ENST00000399002 LETM1O95202 739 aaPredicted RBP10.22□□□□□ -0.77
SPTLC3-201ENST00000399002 DZIP1LQ8IYY4 767 aaKnown RBP10.21□□□□□ -0.77
SPTLC3-201ENST00000399002 GNAI1P63096 354 aa10.21□□□□□ -0.77
SPTLC3-201ENST00000399002 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.21□□□□□ -0.77
SPTLC3-201ENST00000399002 NOL10Q9BSC4 688 aaKnown RBP10.21□□□□□ -0.77
SPTLC3-201ENST00000399002 BECN2A8MW95 431 aa10.21□□□□□ -0.78
SPTLC3-201ENST00000399002 MARCH6O60337 910 aa10.2□□□□□ -0.78
SPTLC3-201ENST00000399002 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.2□□□□□ -0.78
SPTLC3-201ENST00000399002 ERC2O15083 957 aa10.2□□□□□ -0.78
SPTLC3-201ENST00000399002 TRAK1Q9UPV9 953 aa10.2□□□□□ -0.78
SPTLC3-201ENST00000399002 WASHC2AQ641Q2 1341 aa10.2□□□□□ -0.78
SPTLC3-201ENST00000399002 RILPL2Q969X0 211 aa10.2□□□□□ -0.78
SPTLC3-201ENST00000399002 CLUAP1Q96AJ1 413 aa10.2□□□□□ -0.78
SPTLC3-201ENST00000399002 NCOA2Q15596 1464 aa10.19□□□□□ -0.78
SPTLC3-201ENST00000399002 DHX8Q14562 1220 aaKnown RBP10.19□□□□□ -0.78
SPTLC3-201ENST00000399002 HSP90AA2PQ14568 343 aaPredicted RBP10.19□□□□□ -0.78
SPTLC3-201ENST00000399002 ANO8Q9HCE9 1232 aaPredicted RBP10.19□□□□□ -0.78
SPTLC3-201ENST00000399002 TTC5Q8N0Z6 440 aa10.19□□□□□ -0.78
SPTLC3-201ENST00000399002 TEX35Q5T0J7 233 aa10.19□□□□□ -0.78
SPTLC3-201ENST00000399002 ZNF330Q9Y3S2 320 aaPredicted RBP10.19□□□□□ -0.78
SPTLC3-201ENST00000399002 HFM1A2PYH4 1435 aa10.19□□□□□ -0.78
SPTLC3-201ENST00000399002 EXOC6Q8TAG9 804 aa10.18□□□□□ -0.78
SPTLC3-201ENST00000399002 IFIT2P09913 472 aaKnown RBP10.18□□□□□ -0.78
SPTLC3-201ENST00000399002 KIF7Q2M1P5 1343 aa10.18□□□□□ -0.78
SPTLC3-201ENST00000399002 ANO2Q9NQ90 1003 aa10.18□□□□□ -0.78
SPTLC3-201ENST00000399002 ACBD3Q9H3P7 528 aa10.18□□□□□ -0.78
SPTLC3-201ENST00000399002 TEFQ10587 303 aa10.17□□□□□ -0.78
SPTLC3-201ENST00000399002 MTERF4Q7Z6M4 381 aaKnown RBP10.17□□□□□ -0.78
SPTLC3-201ENST00000399002 IGF1RP08069 1367 aa10.17□□□□□ -0.78
SPTLC3-201ENST00000399002 TOMM22Q9NS69 142 aa10.17□□□□□ -0.78
SPTLC3-201ENST00000399002 NCAPD3P42695 1498 aa10.17□□□□□ -0.78
SPTLC3-201ENST00000399002 IPO7O95373 1038 aaKnown RBP10.16□□□□□ -0.78
SPTLC3-201ENST00000399002 FOXD4L1Q9NU39 408 aa10.16□□□□□ -0.78
SPTLC3-201ENST00000399002 ARHGAP5Q13017 1502 aa10.16□□□□□ -0.78
SPTLC3-201ENST00000399002 SUPT6HQ7KZ85 1726 aaKnown RBP10.16□□□□□ -0.78
SPTLC3-201ENST00000399002 CDC45O75419 566 aa10.16□□□□□ -0.78
SPTLC3-201ENST00000399002 ANKRD50Q9ULJ7 1429 aa10.16□□□□□ -0.78
SPTLC3-201ENST00000399002 FRAT2O75474 233 aaPredicted RBP10.16□□□□□ -0.78
SPTLC3-201ENST00000399002 NOL8Q76FK4 1167 aaKnown RBP10.16□□□□□ -0.78
SPTLC3-201ENST00000399002 CCDC39Q9UFE4 941 aa10.16□□□□□ -0.78
SPTLC3-201ENST00000399002 RUSC2Q8N2Y8 1516 aa10.16□□□□□ -0.78
SPTLC3-201ENST00000399002 GRIN2BQ13224 1484 aa10.16□□□□□ -0.78
SPTLC3-201ENST00000399002 HIP1O00291 1037 aa10.16□□□□□ -0.78
SPTLC3-201ENST00000399002 NAT10Q9H0A0 1025 aaKnown RBP10.16□□□□□ -0.78
SPTLC3-201ENST00000399002 SYNJ2O15056 1496 aa10.16□□□□□ -0.78
SPTLC3-201ENST00000399002 PSMA5P28066 241 aa10.15□□□□□ -0.78
SPTLC3-201ENST00000399002 CDR1P51861 262 aa10.15□□□□□ -0.78
SPTLC3-201ENST00000399002 C9orf78Q9NZ63 289 aaPredicted RBP10.15□□□□□ -0.78
SPTLC3-201ENST00000399002 CCP110O43303 1012 aa10.15□□□□□ -0.78
SPTLC3-201ENST00000399002 MCM2P49736 904 aa10.15□□□□□ -0.78
SPTLC3-201ENST00000399002 CT47B1P0C2W7 299 aaPredicted RBP10.15□□□□□ -0.78
SPTLC3-201ENST00000399002 G3BP1Q13283 466 aaKnown RBP eCLIP10.15□□□□□ -0.78
SPTLC3-201ENST00000399002 ARGLU1Q9NWB6 273 aaPredicted RBP10.15□□□□□ -0.78
SPTLC3-201ENST00000399002 ERICH2A1L162 156 aa10.15□□□□□ -0.78
SPTLC3-201ENST00000399002 TRDNQ13061 729 aa10.15□□□□□ -0.78
SPTLC3-201ENST00000399002 RIPK4P57078 832 aa10.15□□□□□ -0.79
SPTLC3-201ENST00000399002 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.15□□□□□ -0.79
SPTLC3-201ENST00000399002 RRP7AQ9Y3A4 280 aaKnown RBP10.14□□□□□ -0.79
SPTLC3-201ENST00000399002 SASS6Q6UVJ0 657 aa10.14□□□□□ -0.79
SPTLC3-201ENST00000399002 SMC3Q9UQE7 1217 aa10.14□□□□□ -0.79
SPTLC3-201ENST00000399002 GTF2E1P29083 439 aaPredicted RBP10.13□□□□□ -0.79
SPTLC3-201ENST00000399002 TRIM34Q9BYJ4 488 aa10.13□□□□□ -0.79
SPTLC3-201ENST00000399002 COG6Q9Y2V7 657 aa10.13□□□□□ -0.79
SPTLC3-201ENST00000399002 CCDC9Q9Y3X0 531 aaKnown RBP10.13□□□□□ -0.79
SPTLC3-201ENST00000399002 MAP7D2Q96T17 732 aa10.13□□□□□ -0.79
SPTLC3-201ENST00000399002 TOP2BQ02880 1626 aa10.13□□□□□ -0.79
SPTLC3-201ENST00000399002 AK7Q96M32 723 aa10.13□□□□□ -0.79
SPTLC3-201ENST00000399002 CPLX1O14810 134 aa10.13□□□□□ -0.79
SPTLC3-201ENST00000399002 BRMS1Q9HCU9 246 aa10.13□□□□□ -0.79
SPTLC3-201ENST00000399002 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.13□□□□□ -0.79
SPTLC3-201ENST00000399002 SMG6Q86US8 1419 aaKnown RBP10.12□□□□□ -0.79
SPTLC3-201ENST00000399002 SAFBQ15424 915 aaKnown RBP eCLIP10.12□□□□□ -0.79
SPTLC3-201ENST00000399002 APAF1O14727 1248 aa10.12□□□□□ -0.79
SPTLC3-201ENST00000399002 MRE11P49959 708 aa10.12□□□□□ -0.79
SPTLC3-201ENST00000399002 VPS53Q5VIR6 699 aa10.12□□□□□ -0.79
SPTLC3-201ENST00000399002 CREBRFQ8IUR6 639 aa10.12□□□□□ -0.79
SPTLC3-201ENST00000399002 CCDC73Q6ZRK6 1079 aa10.12□□□□□ -0.79
SPTLC3-201ENST00000399002 CNTROBQ8N137 903 aa10.12□□□□□ -0.79
SPTLC3-201ENST00000399002 ERC1Q8IUD2 1116 aa10.11□□□□□ -0.79
SPTLC3-201ENST00000399002 C22orf23Q9BZE7 217 aa10.11□□□□□ -0.79
SPTLC3-201ENST00000399002 NOM1Q5C9Z4 860 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms