RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 NCKAP5LQ9HCH0 1330 aa17.82■□□□□ 0.44
TOP3B-202ENST00000398793 PRAG1Q86YV5 1406 aa17.81■□□□□ 0.44
TOP3B-202ENST00000398793 SLC12A5Q9H2X9 1139 aa17.81■□□□□ 0.44
TOP3B-202ENST00000398793 ARAP3Q8WWN8 1544 aa17.81■□□□□ 0.44
TOP3B-202ENST00000398793 TMF1P82094 1093 aa17.81■□□□□ 0.44
TOP3B-202ENST00000398793 VGFO15240 615 aaPredicted RBP17.81■□□□□ 0.44
TOP3B-202ENST00000398793 PRAM1Q96QH2 718 aa17.81■□□□□ 0.44
TOP3B-202ENST00000398793 HSPA2P54652 639 aa17.8■□□□□ 0.44
TOP3B-202ENST00000398793 KIF13AQ9H1H9 1805 aa17.78■□□□□ 0.44
TOP3B-202ENST00000398793 FBLN1P23142 703 aa17.78■□□□□ 0.44
TOP3B-202ENST00000398793 NEFLP07196 543 aa17.78■□□□□ 0.44
TOP3B-202ENST00000398793 IRX6P78412 446 aaPredicted RBP17.76■□□□□ 0.43
TOP3B-202ENST00000398793 TESK2Q96S53 571 aa17.76■□□□□ 0.43
TOP3B-202ENST00000398793 CLTCL1P53675 1640 aa17.76■□□□□ 0.43
TOP3B-202ENST00000398793 KDM5CP41229 1560 aa17.76■□□□□ 0.43
TOP3B-202ENST00000398793 LTKP29376 864 aa17.76■□□□□ 0.43
TOP3B-202ENST00000398793 SPATA31E1Q6ZUB1 1445 aa17.76■□□□□ 0.43
TOP3B-202ENST00000398793 PPRC1Q5VV67 1664 aaKnown RBP17.76■□□□□ 0.43
TOP3B-202ENST00000398793 PPM1GO15355 546 aaPredicted RBP17.76■□□□□ 0.43
TOP3B-202ENST00000398793 SLC52A1Q9NWF4 448 aa17.76■□□□□ 0.43
TOP3B-202ENST00000398793 PRKRIP1Q9H875 184 aaPredicted RBP17.75■□□□□ 0.43
TOP3B-202ENST00000398793 ABCC3O15438 1527 aa17.75■□□□□ 0.43
TOP3B-202ENST00000398793 UNC13BO14795 1591 aa17.75■□□□□ 0.43
TOP3B-202ENST00000398793 IQGAP3Q86VI3 1631 aa17.75■□□□□ 0.43
TOP3B-202ENST00000398793 RICTORQ6R327 1708 aa17.74■□□□□ 0.43
TOP3B-202ENST00000398793 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.74■□□□□ 0.43
TOP3B-202ENST00000398793 C14orf37Q86TY3 774 aa17.73■□□□□ 0.43
TOP3B-202ENST00000398793 MROH1Q8NDA8 1641 aa17.73■□□□□ 0.43
TOP3B-202ENST00000398793 KNSTRNQ9Y448 316 aa17.72■□□□□ 0.43
TOP3B-202ENST00000398793 FANCIQ9NVI1 1328 aa17.71■□□□□ 0.43
TOP3B-202ENST00000398793 UBE2Q2Q8WVN8 375 aa17.71■□□□□ 0.43
TOP3B-202ENST00000398793 KDM5DQ9BY66 1539 aa17.71■□□□□ 0.43
TOP3B-202ENST00000398793 CENPJQ9HC77 1338 aaPredicted RBP17.71■□□□□ 0.43
TOP3B-202ENST00000398793 CFAP74Q9C0B2 1584 aa17.7■□□□□ 0.42
TOP3B-202ENST00000398793 SIGLEC1Q9BZZ2 1709 aa17.7■□□□□ 0.42
TOP3B-202ENST00000398793 GLI2P10070 1586 aa17.69■□□□□ 0.42
TOP3B-202ENST00000398793 EFCAB6Q5THR3 1501 aa17.68■□□□□ 0.42
TOP3B-202ENST00000398793 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.68■□□□□ 0.42
TOP3B-202ENST00000398793 PTPRTO14522 1441 aa17.68■□□□□ 0.42
TOP3B-202ENST00000398793 C14orf93Q9H972 538 aaKnown RBP17.68■□□□□ 0.42
TOP3B-202ENST00000398793 ZBTB7CA1YPR0 619 aa17.67■□□□□ 0.42
TOP3B-202ENST00000398793 TNRQ92752 1358 aa17.67■□□□□ 0.42
TOP3B-202ENST00000398793 MAGI2Q86UL8 1455 aa17.66■□□□□ 0.42
TOP3B-202ENST00000398793 NUTM2GQ5VZR2 741 aa17.66■□□□□ 0.42
TOP3B-202ENST00000398793 ERICH6BQ5W0A0 696 aa17.66■□□□□ 0.42
TOP3B-202ENST00000398793 PMFBP1Q8TBY8 1022 aa17.66■□□□□ 0.42
TOP3B-202ENST00000398793 EID1Q9Y6B2 187 aa17.66■□□□□ 0.42
TOP3B-202ENST00000398793 NEUROD2Q15784 382 aa17.65■□□□□ 0.42
TOP3B-202ENST00000398793 RALGAPBQ86X10 1494 aa17.65■□□□□ 0.42
TOP3B-202ENST00000398793 GGNBP2Q9H3C7 697 aa17.64■□□□□ 0.41
TOP3B-202ENST00000398793 UHRF1BP1Q6BDS2 1440 aa17.64■□□□□ 0.41
TOP3B-202ENST00000398793 PLEKHH1Q9ULM0 1364 aa17.64■□□□□ 0.41
TOP3B-202ENST00000398793 RNF17Q9BXT8 1623 aaKnown RBP17.64■□□□□ 0.41
TOP3B-202ENST00000398793 BCORL1Q5H9F3 1711 aa17.64■□□□□ 0.41
TOP3B-202ENST00000398793 CLTCQ00610 1675 aaKnown RBP17.63■□□□□ 0.41
TOP3B-202ENST00000398793 TRPM2O94759 1503 aa17.63■□□□□ 0.41
TOP3B-202ENST00000398793 TET3O43151 1660 aa17.63■□□□□ 0.41
TOP3B-202ENST00000398793 NBR1Q14596 966 aa17.63■□□□□ 0.41
TOP3B-202ENST00000398793 LMOD2Q6P5Q4 547 aa17.63■□□□□ 0.41
TOP3B-202ENST00000398793 CNTLNQ9NXG0 1405 aa17.63■□□□□ 0.41
TOP3B-202ENST00000398793 CABP1Q9NZU7 370 aa17.63■□□□□ 0.41
TOP3B-202ENST00000398793 RTN4Q9NQC3 1192 aaKnown RBP17.62■□□□□ 0.41
TOP3B-202ENST00000398793 XPCQ01831 940 aaPredicted RBP17.62■□□□□ 0.41
TOP3B-202ENST00000398793 SPHKAPQ2M3C7 1700 aa17.62■□□□□ 0.41
TOP3B-202ENST00000398793 CCDC146Q8IYE0 955 aa17.62■□□□□ 0.41
TOP3B-202ENST00000398793 CDK19Q9BWU1 502 aa17.61■□□□□ 0.41
TOP3B-202ENST00000398793 RIMS2Q9UQ26 1411 aa17.6■□□□□ 0.41
TOP3B-202ENST00000398793 METP08581 1390 aa17.6■□□□□ 0.41
TOP3B-202ENST00000398793 CARD14Q9BXL6 1004 aa17.59■□□□□ 0.41
TOP3B-202ENST00000398793 ZRANB1Q9UGI0 708 aa17.59■□□□□ 0.41
TOP3B-202ENST00000398793 ERVK-7P63135 1459 aa17.58■□□□□ 0.41
TOP3B-202ENST00000398793 SYNMO15061 1565 aa17.57■□□□□ 0.4
TOP3B-202ENST00000398793 MROH2AA6NES4 1674 aa17.57■□□□□ 0.4
TOP3B-202ENST00000398793 AMOTL2Q9Y2J4 779 aa17.57■□□□□ 0.4
TOP3B-202ENST00000398793 CAMSAP1Q5T5Y3 1602 aa17.56■□□□□ 0.4
TOP3B-202ENST00000398793 PAK3O75914 559 aaPredicted RBP17.56■□□□□ 0.4
TOP3B-202ENST00000398793 THEMISQ8N1K5 641 aaPredicted RBP17.55■□□□□ 0.4
TOP3B-202ENST00000398793 IL27Q8NEV9 243 aa17.55■□□□□ 0.4
TOP3B-202ENST00000398793 DEPDC5O75140 1603 aa17.54■□□□□ 0.4
TOP3B-202ENST00000398793 VWDEQ8N2E2 1590 aa17.54■□□□□ 0.4
TOP3B-202ENST00000398793 KCNA6P17658 529 aa17.54■□□□□ 0.4
TOP3B-202ENST00000398793 MORC1Q86VD1 984 aa17.54■□□□□ 0.4
TOP3B-202ENST00000398793 SCAF11Q99590 1463 aaKnown RBP17.53■□□□□ 0.4
TOP3B-202ENST00000398793 EIF3AQ14152 1382 aaKnown RBP17.52■□□□□ 0.4
TOP3B-202ENST00000398793 RRP7AQ9Y3A4 280 aaKnown RBP17.52■□□□□ 0.4
TOP3B-202ENST00000398793 EVC2Q86UK5 1308 aa17.52■□□□□ 0.39
TOP3B-202ENST00000398793 PER1O15534 1290 aaPredicted RBP17.52■□□□□ 0.39
TOP3B-202ENST00000398793 RPGRIP1LQ68CZ1 1315 aa17.51■□□□□ 0.39
TOP3B-202ENST00000398793 HDGFP51858 240 aaKnown RBP17.51■□□□□ 0.39
TOP3B-202ENST00000398793 KTN1Q86UP2 1357 aaKnown RBP17.51■□□□□ 0.39
TOP3B-202ENST00000398793 MYO5BQ9ULV0 1848 aa17.5■□□□□ 0.39
TOP3B-202ENST00000398793 KIF1BO60333 1816 aa17.5■□□□□ 0.39
TOP3B-202ENST00000398793 ARHGEF40Q8TER5 1519 aa17.5■□□□□ 0.39
TOP3B-202ENST00000398793 U2SURPO15042 1029 aaKnown RBP17.5■□□□□ 0.39
TOP3B-202ENST00000398793 CDCA8Q53HL2 280 aa17.5■□□□□ 0.39
TOP3B-202ENST00000398793 EIF2AK4Q9P2K8 1649 aaKnown RBP17.49■□□□□ 0.39
TOP3B-202ENST00000398793 A2ML1A8K2U0 1454 aa17.49■□□□□ 0.39
TOP3B-202ENST00000398793 DDX17Q92841 729 aaKnown RBP17.48■□□□□ 0.39
TOP3B-202ENST00000398793 TRPM1Q7Z4N2 1603 aa17.48■□□□□ 0.39
TOP3B-202ENST00000398793 ZMYM4Q5VZL5 1548 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms