RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 KIF1BO60333 1816 aa25.92■■□□□ 1.74
MBD1-208ENST00000398493 LTKP29376 864 aa25.91■■□□□ 1.74
MBD1-208ENST00000398493 KDM5AP29375 1690 aaKnown RBP25.9■■□□□ 1.74
MBD1-208ENST00000398493 ARHGAP23Q9P227 1491 aa25.88■■□□□ 1.73
MBD1-208ENST00000398493 SLIT1O75093 1534 aa25.88■■□□□ 1.73
MBD1-208ENST00000398493 ZFYVE9O95405 1425 aa25.87■■□□□ 1.73
MBD1-208ENST00000398493 RIMS2Q9UQ26 1411 aa25.87■■□□□ 1.73
MBD1-208ENST00000398493 NCKAP5LQ9HCH0 1330 aa25.87■■□□□ 1.73
MBD1-208ENST00000398493 TXNDC2Q86VQ3 553 aa25.86■■□□□ 1.73
MBD1-208ENST00000398493 L3MBTL2Q969R5 705 aa25.86■■□□□ 1.73
MBD1-208ENST00000398493 SENP3Q9H4L4 574 aaPredicted RBP25.85■■□□□ 1.73
MBD1-208ENST00000398493 NEURL4Q96JN8 1562 aa25.85■■□□□ 1.73
MBD1-208ENST00000398493 CENPBP07199 599 aaPredicted RBP25.84■■□□□ 1.73
MBD1-208ENST00000398493 ANKLE2Q86XL3 938 aa25.84■■□□□ 1.73
MBD1-208ENST00000398493 NEXMIFQ5QGS0 1516 aa25.83■■□□□ 1.73
MBD1-208ENST00000398493 RPGRIP1LQ68CZ1 1315 aa25.82■■□□□ 1.72
MBD1-208ENST00000398493 DCAF11Q8TEB1 546 aa25.81■■□□□ 1.72
MBD1-208ENST00000398493 EID1Q9Y6B2 187 aa25.81■■□□□ 1.72
MBD1-208ENST00000398493 KDM2AQ9Y2K7 1162 aa25.8■■□□□ 1.72
MBD1-208ENST00000398493 ADGRF5Q8IZF2 1346 aa25.79■■□□□ 1.72
MBD1-208ENST00000398493 SCAF11Q99590 1463 aaKnown RBP25.79■■□□□ 1.72
MBD1-208ENST00000398493 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.78■■□□□ 1.72
MBD1-208ENST00000398493 HDGFP51858 240 aaKnown RBP25.77■■□□□ 1.72
MBD1-208ENST00000398493 STRCQ7RTU9 1775 aa25.76■■□□□ 1.71
MBD1-208ENST00000398493 VGFO15240 615 aaPredicted RBP25.75■■□□□ 1.71
MBD1-208ENST00000398493 PPLO60437 1756 aa25.75■■□□□ 1.71
MBD1-208ENST00000398493 IFT172Q9UG01 1749 aa25.73■■□□□ 1.71
MBD1-208ENST00000398493 EIF4G2P78344 907 aaKnown RBP eCLIP25.72■■□□□ 1.71
MBD1-208ENST00000398493 DDX10Q13206 875 aaKnown RBP25.72■■□□□ 1.71
MBD1-208ENST00000398493 HIRIP3Q9BW71 556 aaPredicted RBP25.72■■□□□ 1.71
MBD1-208ENST00000398493 MED14O60244 1454 aa25.71■■□□□ 1.71
MBD1-208ENST00000398493 PLEKHG1Q9ULL1 1385 aa25.71■■□□□ 1.71
MBD1-208ENST00000398493 NPHP4O75161 1426 aaPredicted RBP25.71■■□□□ 1.71
MBD1-208ENST00000398493 BCANQ96GW7 911 aa25.7■■□□□ 1.7
MBD1-208ENST00000398493 MYOM2P54296 1465 aa25.69■■□□□ 1.7
MBD1-208ENST00000398493 POLR1AO95602 1720 aaPredicted RBP25.69■■□□□ 1.7
MBD1-208ENST00000398493 SLC26A8Q96RN1 970 aa25.69■■□□□ 1.7
MBD1-208ENST00000398493 NRXN1Q9ULB1 1477 aa25.67■■□□□ 1.7
MBD1-208ENST00000398493 ADAMTS13Q76LX8 1427 aa25.66■■□□□ 1.7
MBD1-208ENST00000398493 PIK3C2GO75747 1445 aa25.65■■□□□ 1.7
MBD1-208ENST00000398493 HSPA5P11021 654 aaKnown RBP25.65■■□□□ 1.7
MBD1-208ENST00000398493 STAC3Q96MF2 364 aa25.65■■□□□ 1.7
MBD1-208ENST00000398493 NRXN3Q9Y4C0 1643 aa25.64■■□□□ 1.7
MBD1-208ENST00000398493 NBPF8Q3BBV2 869 aa25.64■■□□□ 1.7
MBD1-208ENST00000398493 CFAP70Q5T0N1 1121 aa25.63■■□□□ 1.69
MBD1-208ENST00000398493 IQGAP1P46940 1657 aa25.63■■□□□ 1.69
MBD1-208ENST00000398493 PRAG1Q86YV5 1406 aa25.62■■□□□ 1.69
MBD1-208ENST00000398493 SETBP1Q9Y6X0 1596 aa25.61■■□□□ 1.69
MBD1-208ENST00000398493 YTHDC1Q96MU7 727 aaKnown RBP25.61■■□□□ 1.69
MBD1-208ENST00000398493 C14orf93Q9H972 538 aaKnown RBP25.6■■□□□ 1.69
MBD1-208ENST00000398493 DMRT2Q9Y5R5 561 aa25.6■■□□□ 1.69
MBD1-208ENST00000398493 TBX22Q9Y458 520 aa25.59■■□□□ 1.69
MBD1-208ENST00000398493 METP08581 1390 aa25.58■■□□□ 1.69
MBD1-208ENST00000398493 ALKQ9UM73 1620 aa25.58■■□□□ 1.69
MBD1-208ENST00000398493 TMEM132EQ6IEE7 984 aa25.56■■□□□ 1.68
MBD1-208ENST00000398493 NBPF1Q3BBV0 1214 aa25.55■■□□□ 1.68
MBD1-208ENST00000398493 ANP32CO43423 234 aa25.53■■□□□ 1.68
MBD1-208ENST00000398493 SETD1AO15047 1707 aaKnown RBP25.52■■□□□ 1.68
MBD1-208ENST00000398493 SCAF1Q9H7N4 1312 aaKnown RBP25.51■■□□□ 1.67
MBD1-208ENST00000398493 PTPRUQ92729 1446 aa25.51■■□□□ 1.67
MBD1-208ENST00000398493 ASXL1Q8IXJ9 1541 aa25.51■■□□□ 1.67
MBD1-208ENST00000398493 ZNF335Q9H4Z2 1342 aaPredicted RBP25.51■■□□□ 1.67
MBD1-208ENST00000398493 DIP2AQ14689 1571 aa25.49■■□□□ 1.67
MBD1-208ENST00000398493 ADGRB1O14514 1584 aa25.47■■□□□ 1.67
MBD1-208ENST00000398493 AMOTL2Q9Y2J4 779 aa25.47■■□□□ 1.67
MBD1-208ENST00000398493 WASHC2AQ641Q2 1341 aa25.45■■□□□ 1.66
MBD1-208ENST00000398493 KCNA6P17658 529 aa25.45■■□□□ 1.66
MBD1-208ENST00000398493 STK26Q9P289 416 aa25.45■■□□□ 1.66
MBD1-208ENST00000398493 PIK3R4Q99570 1358 aa25.45■■□□□ 1.66
MBD1-208ENST00000398493 TRPM1Q7Z4N2 1603 aa25.44■■□□□ 1.66
MBD1-208ENST00000398493 CCER2I3L3R5 266 aa25.43■■□□□ 1.66
MBD1-208ENST00000398493 LAMC1P11047 1609 aa25.43■■□□□ 1.66
MBD1-208ENST00000398493 RALGAPBQ86X10 1494 aa25.42■■□□□ 1.66
MBD1-208ENST00000398493 ROCK2O75116 1388 aaKnown RBP25.42■■□□□ 1.66
MBD1-208ENST00000398493 YTHDC2Q9H6S0 1430 aaKnown RBP25.42■■□□□ 1.66
MBD1-208ENST00000398493 KIAA1210Q9ULL0 1709 aa25.41■■□□□ 1.66
MBD1-208ENST00000398493 STRCP1A6NGW2 1772 aa25.41■■□□□ 1.66
MBD1-208ENST00000398493 RBM33Q96EV2 1170 aaKnown RBP25.4■■□□□ 1.66
MBD1-208ENST00000398493 TRAK1Q9UPV9 953 aa25.4■■□□□ 1.66
MBD1-208ENST00000398493 CHD2O14647 1828 aaKnown RBP25.4■■□□□ 1.66
MBD1-208ENST00000398493 LRPPRCP42704 1394 aaKnown RBP25.39■■□□□ 1.66
MBD1-208ENST00000398493 CCDC7Q96M83 1385 aa25.39■■□□□ 1.66
MBD1-208ENST00000398493 GPRASP1Q5JY77 1395 aa25.38■■□□□ 1.65
MBD1-208ENST00000398493 USP47Q96K76 1375 aa25.38■■□□□ 1.65
MBD1-208ENST00000398493 CARD11Q9BXL7 1154 aa25.38■■□□□ 1.65
MBD1-208ENST00000398493 ABCC11Q96J66 1382 aa25.37■■□□□ 1.65
MBD1-208ENST00000398493 ROBO2Q9HCK4 1378 aa25.37■■□□□ 1.65
MBD1-208ENST00000398493 NWD1Q149M9 1564 aa25.36■■□□□ 1.65
MBD1-208ENST00000398493 XRN1Q8IZH2 1706 aaKnown RBP25.35■■□□□ 1.65
MBD1-208ENST00000398493 WAPLQ7Z5K2 1190 aa25.35■■□□□ 1.65
MBD1-208ENST00000398493 LTBP4Q8N2S1 1624 aa25.34■■□□□ 1.65
MBD1-208ENST00000398493 TECPR2O15040 1411 aa25.33■■□□□ 1.65
MBD1-208ENST00000398493 PLEKHH1Q9ULM0 1364 aa25.32■■□□□ 1.64
MBD1-208ENST00000398493 C11orf95C9JLR9 678 aaPredicted RBP25.32■■□□□ 1.64
MBD1-208ENST00000398493 PROSER2Q86WR7 435 aaPredicted RBP25.31■■□□□ 1.64
MBD1-208ENST00000398493 KIF7Q2M1P5 1343 aa25.3■■□□□ 1.64
MBD1-208ENST00000398493 PRAM1Q96QH2 718 aa25.3■■□□□ 1.64
MBD1-208ENST00000398493 LRRC7Q96NW7 1537 aa25.29■■□□□ 1.64
MBD1-208ENST00000398493 PTCH1Q13635 1447 aa25.29■■□□□ 1.64
MBD1-208ENST00000398493 NKTRP30414 1462 aaKnown RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms