RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 EIF3AQ14152 1382 aaKnown RBP22.54■■□□□ 1.2
EWSR1-206ENST00000397938 SLFN5Q08AF3 891 aa22.54■■□□□ 1.2
EWSR1-206ENST00000397938 SYCP2Q9BX26 1530 aa22.54■■□□□ 1.2
EWSR1-206ENST00000397938 FRAT2O75474 233 aaPredicted RBP22.53■■□□□ 1.2
EWSR1-206ENST00000397938 KNSTRNQ9Y448 316 aa22.53■■□□□ 1.2
EWSR1-206ENST00000397938 SYNMO15061 1565 aa22.53■■□□□ 1.2
EWSR1-206ENST00000397938 IQGAP1P46940 1657 aa22.53■■□□□ 1.2
EWSR1-206ENST00000397938 RGS3P49796 1198 aa22.53■■□□□ 1.2
EWSR1-206ENST00000397938 PIK3C2GO75747 1445 aa22.52■■□□□ 1.2
EWSR1-206ENST00000397938 AMER1Q5JTC6 1135 aaPredicted RBP22.52■■□□□ 1.2
EWSR1-206ENST00000397938 PLXNC1O60486 1568 aa22.52■■□□□ 1.2
EWSR1-206ENST00000397938 TRMT2AQ8IZ69 625 aaKnown RBP22.51■■□□□ 1.19
EWSR1-206ENST00000397938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.51■■□□□ 1.193e-7■■□□□ 13.2
EWSR1-206ENST00000397938 ASXL1Q8IXJ9 1541 aa22.5■■□□□ 1.19
EWSR1-206ENST00000397938 FBLN2P98095 1184 aa22.49■■□□□ 1.19
EWSR1-206ENST00000397938 NKTRP30414 1462 aaKnown RBP22.49■■□□□ 1.19
EWSR1-206ENST00000397938 ABCC2Q92887 1545 aa22.49■■□□□ 1.19
EWSR1-206ENST00000397938 MADDQ8WXG6 1647 aa22.48■■□□□ 1.19
EWSR1-206ENST00000397938 MYOM1P52179 1685 aa22.45■■□□□ 1.18
EWSR1-206ENST00000397938 NPC1L1Q9UHC9 1359 aa22.44■■□□□ 1.18
EWSR1-206ENST00000397938 USP19O94966 1318 aa22.43■■□□□ 1.18
EWSR1-206ENST00000397938 DUOX2Q9NRD8 1548 aa22.43■■□□□ 1.18
EWSR1-206ENST00000397938 ARHGAP5Q13017 1502 aa22.43■■□□□ 1.18
EWSR1-206ENST00000397938 CDCA8Q53HL2 280 aa22.42■■□□□ 1.18
EWSR1-206ENST00000397938 SPINK5Q9NQ38 1064 aaPredicted RBP22.42■■□□□ 1.18
EWSR1-206ENST00000397938 TTC37Q6PGP7 1564 aa22.42■■□□□ 1.18
EWSR1-206ENST00000397938 CCDC146Q8IYE0 955 aa22.41■■□□□ 1.18
EWSR1-206ENST00000397938 BCAR3O75815 825 aa22.4■■□□□ 1.18
EWSR1-206ENST00000397938 SCAF11Q99590 1463 aaKnown RBP22.4■■□□□ 1.18
EWSR1-206ENST00000397938 FAM43AQ8N2R8 423 aa22.39■■□□□ 1.18
EWSR1-206ENST00000397938 SPHKAPQ2M3C7 1700 aa22.39■■□□□ 1.18
EWSR1-206ENST00000397938 ERCC6Q03468 1493 aa22.39■■□□□ 1.17
EWSR1-206ENST00000397938 E9PSI1 815 aa22.39■■□□□ 1.17
EWSR1-206ENST00000397938 IGHDP01880 384 aa22.39■■□□□ 1.17
EWSR1-206ENST00000397938 APAF1O14727 1248 aa22.38■■□□□ 1.17
EWSR1-206ENST00000397938 CGNL1Q0VF96 1302 aa22.37■■□□□ 1.17
EWSR1-206ENST00000397938 SCAPERQ9BY12 1400 aa22.36■■□□□ 1.17
EWSR1-206ENST00000397938 MAPK8IP3Q9UPT6 1336 aa22.36■■□□□ 1.17
EWSR1-206ENST00000397938 NINLQ9Y2I6 1382 aa22.36■■□□□ 1.17
EWSR1-206ENST00000397938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.36■■□□□ 1.17
EWSR1-206ENST00000397938 PDE3AQ14432 1141 aa22.35■■□□□ 1.17
EWSR1-206ENST00000397938 NLRP1Q9C000 1473 aa22.35■■□□□ 1.17
EWSR1-206ENST00000397938 KDM5AP29375 1690 aaKnown RBP22.34■■□□□ 1.17
EWSR1-206ENST00000397938 BECN1Q14457 450 aa22.33■■□□□ 1.17
EWSR1-206ENST00000397938 NGEFQ8N5V2 710 aa22.33■■□□□ 1.16
EWSR1-206ENST00000397938 CEP152O94986 1710 aa22.33■■□□□ 1.16
EWSR1-206ENST00000397938 CLUAP1Q96AJ1 413 aa22.32■■□□□ 1.16
EWSR1-206ENST00000397938 SEC24BO95487 1268 aa22.32■■□□□ 1.16
EWSR1-206ENST00000397938 TRPM2O94759 1503 aa22.31■■□□□ 1.16
EWSR1-206ENST00000397938 POGKQ9P215 609 aa22.31■■□□□ 1.16
EWSR1-206ENST00000397938 DMRT2Q9Y5R5 561 aa22.31■■□□□ 1.16
EWSR1-206ENST00000397938 CENPJQ9HC77 1338 aaPredicted RBP22.29■■□□□ 1.16
EWSR1-206ENST00000397938 RSPH6AQ9H0K4 717 aa22.28■■□□□ 1.16
EWSR1-206ENST00000397938 STAC3Q96MF2 364 aa22.28■■□□□ 1.16
EWSR1-206ENST00000397938 KIAA1210Q9ULL0 1709 aa22.27■■□□□ 1.15
EWSR1-206ENST00000397938 UBE2Q2Q8WVN8 375 aa22.26■■□□□ 1.15
EWSR1-206ENST00000397938 EIF5BO60841 1220 aaKnown RBP22.26■■□□□ 1.15
EWSR1-206ENST00000397938 PANK1Q8TE04 598 aa22.26■■□□□ 1.15
EWSR1-206ENST00000397938 COG6Q9Y2V7 657 aa22.26■■□□□ 1.15
EWSR1-206ENST00000397938 ZMYM3Q14202 1370 aa22.25■■□□□ 1.15
EWSR1-206ENST00000397938 CLTCL1P53675 1640 aa22.25■■□□□ 1.15
EWSR1-206ENST00000397938 ANTXR1Q9H6X2 564 aa22.25■■□□□ 1.15
EWSR1-206ENST00000397938 SLKQ9H2G2 1235 aaPredicted RBP22.24■■□□□ 1.15
EWSR1-206ENST00000397938 CANXP27824 592 aaKnown RBP22.24■■□□□ 1.15
EWSR1-206ENST00000397938 PTPRTO14522 1441 aa22.23■■□□□ 1.15
EWSR1-206ENST00000397938 L1TD1Q5T7N2 865 aaKnown RBP22.22■■□□□ 1.15
EWSR1-206ENST00000397938 WWC1Q8IX03 1113 aa22.22■■□□□ 1.15
EWSR1-206ENST00000397938 ERVK-7P63135 1459 aa22.21■■□□□ 1.15
EWSR1-206ENST00000397938 AAMPQ13685 434 aa22.21■■□□□ 1.15
EWSR1-206ENST00000397938 PMFBP1Q8TBY8 1022 aa22.21■■□□□ 1.15
EWSR1-206ENST00000397938 TBC1D32Q96NH3 1257 aa22.2■■□□□ 1.14
EWSR1-206ENST00000397938 POLR3AO14802 1390 aaPredicted RBP22.2■■□□□ 1.14
EWSR1-206ENST00000397938 UPF2Q9HAU5 1272 aaKnown RBP22.19■■□□□ 1.14
EWSR1-206ENST00000397938 SHPRHQ149N8 1683 aa22.18■■□□□ 1.14
EWSR1-206ENST00000397938 CARD14Q9BXL6 1004 aa22.18■■□□□ 1.14
EWSR1-206ENST00000397938 ABCC1P33527 1531 aa22.18■■□□□ 1.14
EWSR1-206ENST00000397938 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
EWSR1-206ENST00000397938 SLC24A1O60721 1099 aa22.16■■□□□ 1.14
EWSR1-206ENST00000397938 TBC1D2Q9BYX2 928 aa22.16■■□□□ 1.14
EWSR1-206ENST00000397938 RARSP54136 660 aaKnown RBP22.15■■□□□ 1.14
EWSR1-206ENST00000397938 RRAGDQ9NQL2 400 aaPredicted RBP22.15■■□□□ 1.14
EWSR1-206ENST00000397938 PCDHB15Q9Y5E8 787 aa22.15■■□□□ 1.14
EWSR1-206ENST00000397938 PLCH2O75038 1416 aa22.15■■□□□ 1.14
EWSR1-206ENST00000397938 TET3O43151 1660 aa22.15■■□□□ 1.14
EWSR1-206ENST00000397938 NEURL4Q96JN8 1562 aa22.14■■□□□ 1.14
EWSR1-206ENST00000397938 DEPDC5O75140 1603 aa22.14■■□□□ 1.14
EWSR1-206ENST00000397938 IQSEC2Q5JU85 1478 aa22.14■■□□□ 1.14
EWSR1-206ENST00000397938 ABCA6Q8N139 1617 aa22.14■■□□□ 1.13
EWSR1-206ENST00000397938 PDZRN3Q9UPQ7 1066 aa22.14■■□□□ 1.13
EWSR1-206ENST00000397938 TRAPPC8Q9Y2L5 1435 aa22.13■■□□□ 1.13
EWSR1-206ENST00000397938 MAP3K4Q9Y6R4 1608 aa22.12■■□□□ 1.13
EWSR1-206ENST00000397938 RLBP1P12271 317 aa22.11■■□□□ 1.13
EWSR1-206ENST00000397938 MYOM2P54296 1465 aa22.11■■□□□ 1.13
EWSR1-206ENST00000397938 MYO3AQ8NEV4 1616 aa22.11■■□□□ 1.13
EWSR1-206ENST00000397938 PHF23Q9BUL5 403 aaPredicted RBP22.1■■□□□ 1.13
EWSR1-206ENST00000397938 EFCAB2Q5VUJ9 269 aa22.09■■□□□ 1.13
EWSR1-206ENST00000397938 RUNDC1Q96C34 613 aa22.09■■□□□ 1.13
EWSR1-206ENST00000397938 TNNQ9UQP3 1299 aa22.09■■□□□ 1.13
EWSR1-206ENST00000397938 ZFYVE16Q7Z3T8 1539 aa22.08■■□□□ 1.13
EWSR1-206ENST00000397938 FSD2A1L4K1 749 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms