RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 SLFN5Q08AF3 891 aa17.87■□□□□ 0.45
COL6A2-203ENST00000397763 NUP160Q12769 1436 aa17.87■□□□□ 0.45
COL6A2-203ENST00000397763 ZMYM4Q5VZL5 1548 aa17.87■□□□□ 0.45
COL6A2-203ENST00000397763 AFAP1Q8N556 730 aa17.87■□□□□ 0.45
COL6A2-203ENST00000397763 CANXP27824 592 aaKnown RBP17.86■□□□□ 0.45
COL6A2-203ENST00000397763 ARXQ96QS3 562 aa17.86■□□□□ 0.45
COL6A2-203ENST00000397763 BCL2L13Q9BXK5 485 aa17.86■□□□□ 0.45
COL6A2-203ENST00000397763 COG6Q9Y2V7 657 aa17.86■□□□□ 0.45
COL6A2-203ENST00000397763 SEC24BO95487 1268 aa17.85■□□□□ 0.45
COL6A2-203ENST00000397763 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.84■□□□□ 0.45
COL6A2-203ENST00000397763 CFAP70Q5T0N1 1121 aa17.84■□□□□ 0.45
COL6A2-203ENST00000397763 TNNQ9UQP3 1299 aa17.84■□□□□ 0.45
COL6A2-203ENST00000397763 CDC42BPBQ9Y5S2 1711 aa17.83■□□□□ 0.45
COL6A2-203ENST00000397763 WDR7Q9Y4E6 1490 aa17.83■□□□□ 0.45
COL6A2-203ENST00000397763 SLKQ9H2G2 1235 aaPredicted RBP17.83■□□□□ 0.44
COL6A2-203ENST00000397763 PRDM15P57071 1507 aaPredicted RBP17.83■□□□□ 0.44
COL6A2-203ENST00000397763 RSPH4AQ5TD94 716 aa17.83■□□□□ 0.44
COL6A2-203ENST00000397763 ZNF521Q96K83 1311 aa17.82■□□□□ 0.44
COL6A2-203ENST00000397763 CLUAP1Q96AJ1 413 aa17.81■□□□□ 0.44
COL6A2-203ENST00000397763 SPRYD3Q8NCJ5 442 aa17.81■□□□□ 0.44
COL6A2-203ENST00000397763 CHGAP10645 457 aaKnown RBP17.8■□□□□ 0.44
COL6A2-203ENST00000397763 ARHGEF5Q12774 1597 aa17.8■□□□□ 0.44
COL6A2-203ENST00000397763 TTC37Q6PGP7 1564 aa17.79■□□□□ 0.44
COL6A2-203ENST00000397763 CARD14Q9BXL6 1004 aa17.79■□□□□ 0.44
COL6A2-203ENST00000397763 MYO5CQ9NQX4 1742 aa17.77■□□□□ 0.44
COL6A2-203ENST00000397763 TRAPPC8Q9Y2L5 1435 aa17.74■□□□□ 0.43
COL6A2-203ENST00000397763 KIF3BO15066 747 aa17.74■□□□□ 0.43
COL6A2-203ENST00000397763 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.73■□□□□ 0.43
COL6A2-203ENST00000397763 ADGRF5Q8IZF2 1346 aa17.73■□□□□ 0.43
COL6A2-203ENST00000397763 PREX2Q70Z35 1606 aa17.73■□□□□ 0.43
COL6A2-203ENST00000397763 CDCA8Q53HL2 280 aa17.73■□□□□ 0.43
COL6A2-203ENST00000397763 NUTM2DQ5VT03 806 aaPredicted RBP17.73■□□□□ 0.43
COL6A2-203ENST00000397763 SPAG9O60271 1321 aaKnown RBP17.73■□□□□ 0.43
COL6A2-203ENST00000397763 CENPJQ9HC77 1338 aaPredicted RBP17.73■□□□□ 0.43
COL6A2-203ENST00000397763 EFCAB2Q5VUJ9 269 aa17.72■□□□□ 0.43
COL6A2-203ENST00000397763 POGKQ9P215 609 aa17.72■□□□□ 0.43
COL6A2-203ENST00000397763 E9PSI1 815 aa17.72■□□□□ 0.43
COL6A2-203ENST00000397763 TRAK1Q9UPV9 953 aa17.72■□□□□ 0.43
COL6A2-203ENST00000397763 RLBP1P12271 317 aa17.71■□□□□ 0.43
COL6A2-203ENST00000397763 WWC1Q8IX03 1113 aa17.71■□□□□ 0.43
COL6A2-203ENST00000397763 TRMT2AQ8IZ69 625 aaKnown RBP17.71■□□□□ 0.43
COL6A2-203ENST00000397763 USP19O94966 1318 aa17.71■□□□□ 0.43
COL6A2-203ENST00000397763 SLC12A5Q9H2X9 1139 aa17.7■□□□□ 0.42
COL6A2-203ENST00000397763 NKTRP30414 1462 aaKnown RBP17.7■□□□□ 0.42
COL6A2-203ENST00000397763 ERCC6L2Q5T890 1561 aa17.69■□□□□ 0.42
COL6A2-203ENST00000397763 ASXL1Q8IXJ9 1541 aa17.69■□□□□ 0.42
COL6A2-203ENST00000397763 TMEM132EQ6IEE7 984 aa17.69■□□□□ 0.42
COL6A2-203ENST00000397763 PCDHB15Q9Y5E8 787 aa17.69■□□□□ 0.42
COL6A2-203ENST00000397763 UNC13BO14795 1591 aa17.68■□□□□ 0.42
COL6A2-203ENST00000397763 SAFB2Q14151 953 aaKnown RBP eCLIP17.67■□□□□ 0.42
COL6A2-203ENST00000397763 MORC1Q86VD1 984 aa17.67■□□□□ 0.42
COL6A2-203ENST00000397763 SCAF11Q99590 1463 aaKnown RBP17.67■□□□□ 0.42
COL6A2-203ENST00000397763 TCP11L2Q8N4U5 519 aa17.66■□□□□ 0.42
COL6A2-203ENST00000397763 EIF2AK4Q9P2K8 1649 aaKnown RBP17.66■□□□□ 0.42
COL6A2-203ENST00000397763 IQGAP3Q86VI3 1631 aa17.65■□□□□ 0.42
COL6A2-203ENST00000397763 UGGT1Q9NYU2 1555 aa17.65■□□□□ 0.42
COL6A2-203ENST00000397763 INSRP06213 1382 aa17.65■□□□□ 0.42
COL6A2-203ENST00000397763 DUOX2Q9NRD8 1548 aa17.64■□□□□ 0.41
COL6A2-203ENST00000397763 GZF1Q9H116 711 aaPredicted RBP17.64■□□□□ 0.41
COL6A2-203ENST00000397763 MAST1Q9Y2H9 1570 aa17.63■□□□□ 0.41
COL6A2-203ENST00000397763 ATP10AO60312 1499 aa17.63■□□□□ 0.41
COL6A2-203ENST00000397763 EIF3AQ14152 1382 aaKnown RBP17.63■□□□□ 0.41
COL6A2-203ENST00000397763 UBE2Q2Q8WVN8 375 aa17.63■□□□□ 0.41
COL6A2-203ENST00000397763 PIK3C2GO75747 1445 aa17.63■□□□□ 0.41
COL6A2-203ENST00000397763 PDZRN3Q9UPQ7 1066 aa17.63■□□□□ 0.41
COL6A2-203ENST00000397763 RARSP54136 660 aaKnown RBP17.62■□□□□ 0.41
COL6A2-203ENST00000397763 CGNL1Q0VF96 1302 aa17.62■□□□□ 0.41
COL6A2-203ENST00000397763 MTHFSP49914 203 aa17.62■□□□□ 0.41
COL6A2-203ENST00000397763 TSR2Q969E8 191 aaKnown RBP17.61■□□□□ 0.41
COL6A2-203ENST00000397763 MADDQ8WXG6 1647 aa17.61■□□□□ 0.41
COL6A2-203ENST00000397763 LAMC1P11047 1609 aa17.6■□□□□ 0.41
COL6A2-203ENST00000397763 PDE3AQ14432 1141 aa17.59■□□□□ 0.41
COL6A2-203ENST00000397763 U2AF1L5P0DN76 240 aaPredicted RBP17.58■□□□□ 0.41
COL6A2-203ENST00000397763 U2AF1Q01081 240 aaKnown RBP eCLIP17.58■□□□□ 0.41
COL6A2-203ENST00000397763 PLCH2O75038 1416 aa17.58■□□□□ 0.4
COL6A2-203ENST00000397763 NSD3Q9BZ95 1437 aa17.58■□□□□ 0.4
COL6A2-203ENST00000397763 RNF17Q9BXT8 1623 aaKnown RBP17.57■□□□□ 0.4
COL6A2-203ENST00000397763 ERVK-7P63135 1459 aa17.57■□□□□ 0.4
COL6A2-203ENST00000397763 CLTCL1P53675 1640 aa17.57■□□□□ 0.4
COL6A2-203ENST00000397763 MFAP1P55081 439 aaKnown RBP17.56■□□□□ 0.4
COL6A2-203ENST00000397763 BECN1Q14457 450 aa17.56■□□□□ 0.4
COL6A2-203ENST00000397763 SCAPERQ9BY12 1400 aa17.56■□□□□ 0.4
COL6A2-203ENST00000397763 TBC1D2Q9BYX2 928 aa17.56■□□□□ 0.4
COL6A2-203ENST00000397763 SYNMO15061 1565 aa17.56■□□□□ 0.4
COL6A2-203ENST00000397763 RUNDC1Q96C34 613 aa17.56■□□□□ 0.4
COL6A2-203ENST00000397763 IQGAP1P46940 1657 aa17.55■□□□□ 0.4
COL6A2-203ENST00000397763 U2SURPO15042 1029 aaKnown RBP17.55■□□□□ 0.4
COL6A2-203ENST00000397763 MAPK8IP3Q9UPT6 1336 aa17.55■□□□□ 0.4
COL6A2-203ENST00000397763 GGT6Q6P531 493 aa17.55■□□□□ 0.4
COL6A2-203ENST00000397763 PLXNC1O60486 1568 aa17.54■□□□□ 0.4
COL6A2-203ENST00000397763 MYOM1P52179 1685 aa17.54■□□□□ 0.4
COL6A2-203ENST00000397763 UPF2Q9HAU5 1272 aaKnown RBP17.54■□□□□ 0.4
COL6A2-203ENST00000397763 FTSJ3Q8IY81 847 aaKnown RBP17.53■□□□□ 0.4
COL6A2-203ENST00000397763 FAM43AQ8N2R8 423 aa17.53■□□□□ 0.4
COL6A2-203ENST00000397763 CFAP65Q6ZU64 1925 aaKnown RBP17.53■□□□□ 0.4
COL6A2-203ENST00000397763 RSPH6AQ9H0K4 717 aa17.52■□□□□ 0.4
COL6A2-203ENST00000397763 KANK1Q14678 1352 aa17.52■□□□□ 0.4
COL6A2-203ENST00000397763 CABP2Q9NPB3 220 aa17.52■□□□□ 0.4
COL6A2-203ENST00000397763 STK26Q9P289 416 aa17.52■□□□□ 0.39
COL6A2-203ENST00000397763 PMFBP1Q8TBY8 1022 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms