RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 STAG3Q9UJ98 1225 aa20.22■□□□□ 0.83
GAPDH-203ENST00000396858 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
GAPDH-203ENST00000396858 KDM2AQ9Y2K7 1162 aa20.21■□□□□ 0.83
GAPDH-203ENST00000396858 RALGAPBQ86X10 1494 aa20.19■□□□□ 0.82
GAPDH-203ENST00000396858 NRXN1Q9ULB1 1477 aa20.19■□□□□ 0.82
GAPDH-203ENST00000396858 NBPF8Q3BBV2 869 aa20.19■□□□□ 0.82
GAPDH-203ENST00000396858 TRPM1Q7Z4N2 1603 aa20.19■□□□□ 0.82
GAPDH-203ENST00000396858 ZFYVE9O95405 1425 aa20.19■□□□□ 0.82
GAPDH-203ENST00000396858 RIMS2Q9UQ26 1411 aa20.19■□□□□ 0.82
GAPDH-203ENST00000396858 RPGRIP1LQ68CZ1 1315 aa20.16■□□□□ 0.82
GAPDH-203ENST00000396858 NUTM2DQ5VT03 806 aaPredicted RBP20.15■□□□□ 0.82
GAPDH-203ENST00000396858 ADGRF5Q8IZF2 1346 aa20.15■□□□□ 0.82
GAPDH-203ENST00000396858 PIK3C2GO75747 1445 aa20.15■□□□□ 0.82
GAPDH-203ENST00000396858 SLIT1O75093 1534 aa20.15■□□□□ 0.82
GAPDH-203ENST00000396858 TMEM2Q9UHN6 1383 aa20.14■□□□□ 0.81
GAPDH-203ENST00000396858 ARHGAP23Q9P227 1491 aa20.13■□□□□ 0.81
GAPDH-203ENST00000396858 KIAA1210Q9ULL0 1709 aa20.1■□□□□ 0.81
GAPDH-203ENST00000396858 LAMC1P11047 1609 aa20.1■□□□□ 0.81
GAPDH-203ENST00000396858 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
GAPDH-203ENST00000396858 IQGAP1P46940 1657 aa20.1■□□□□ 0.81
GAPDH-203ENST00000396858 SETD1BQ9UPS6 1966 aaKnown RBP20.09■□□□□ 0.81
GAPDH-203ENST00000396858 NRXN3Q9Y4C0 1643 aa20.09■□□□□ 0.81
GAPDH-203ENST00000396858 STAC3Q96MF2 364 aa20.08■□□□□ 0.81
GAPDH-203ENST00000396858 ROCK2O75116 1388 aaKnown RBP20.08■□□□□ 0.8
GAPDH-203ENST00000396858 SCAF11Q99590 1463 aaKnown RBP20.07■□□□□ 0.8
GAPDH-203ENST00000396858 SETBP1Q9Y6X0 1596 aa20.07■□□□□ 0.8
GAPDH-203ENST00000396858 ASXL1Q8IXJ9 1541 aa20.07■□□□□ 0.8
GAPDH-203ENST00000396858 VGFO15240 615 aaPredicted RBP20.05■□□□□ 0.8
GAPDH-203ENST00000396858 GPRASP1Q5JY77 1395 aa20.05■□□□□ 0.8
GAPDH-203ENST00000396858 LMTK3Q96Q04 1460 aa20.05■□□□□ 0.8
GAPDH-203ENST00000396858 SETD1AO15047 1707 aaKnown RBP20.05■□□□□ 0.8
GAPDH-203ENST00000396858 THEMISQ8N1K5 641 aaPredicted RBP20.04■□□□□ 0.8
GAPDH-203ENST00000396858 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.04■□□□□ 0.8
GAPDH-203ENST00000396858 ADGRB1O14514 1584 aa20.04■□□□□ 0.8
GAPDH-203ENST00000396858 ALKQ9UM73 1620 aa20.03■□□□□ 0.8
GAPDH-203ENST00000396858 POLR1AO95602 1720 aaPredicted RBP20.03■□□□□ 0.8
GAPDH-203ENST00000396858 NBPF1Q3BBV0 1214 aa20.02■□□□□ 0.8
GAPDH-203ENST00000396858 CFAP70Q5T0N1 1121 aa20.02■□□□□ 0.8
GAPDH-203ENST00000396858 PLEKHG1Q9ULL1 1385 aa20.02■□□□□ 0.8
GAPDH-203ENST00000396858 LTKP29376 864 aa20.01■□□□□ 0.79
GAPDH-203ENST00000396858 USP47Q96K76 1375 aa19.99■□□□□ 0.79
GAPDH-203ENST00000396858 TXNDC2Q86VQ3 553 aa19.99■□□□□ 0.79
GAPDH-203ENST00000396858 CARD11Q9BXL7 1154 aa19.99■□□□□ 0.79
GAPDH-203ENST00000396858 EID1Q9Y6B2 187 aa19.99■□□□□ 0.79
GAPDH-203ENST00000396858 ADAMTS13Q76LX8 1427 aa19.98■□□□□ 0.79
GAPDH-203ENST00000396858 DIP2AQ14689 1571 aa19.97■□□□□ 0.79
GAPDH-203ENST00000396858 HDGFP51858 240 aaKnown RBP19.97■□□□□ 0.79
GAPDH-203ENST00000396858 C14orf93Q9H972 538 aaKnown RBP19.97■□□□□ 0.79
GAPDH-203ENST00000396858 HSPA5P11021 654 aaKnown RBP19.93■□□□□ 0.78
GAPDH-203ENST00000396858 HSPA2P54652 639 aa19.93■□□□□ 0.78
GAPDH-203ENST00000396858 BCANQ96GW7 911 aa19.93■□□□□ 0.78
GAPDH-203ENST00000396858 NPHP4O75161 1426 aaPredicted RBP19.93■□□□□ 0.78
GAPDH-203ENST00000396858 MED14O60244 1454 aa19.92■□□□□ 0.78
GAPDH-203ENST00000396858 ANKLE2Q86XL3 938 aa19.92■□□□□ 0.78
GAPDH-203ENST00000396858 ARHGEF28Q8N1W1 1705 aaKnown RBP19.92■□□□□ 0.78
GAPDH-203ENST00000396858 EIF4G2P78344 907 aaKnown RBP eCLIP19.91■□□□□ 0.78
GAPDH-203ENST00000396858 TMEM132EQ6IEE7 984 aa19.91■□□□□ 0.78
GAPDH-203ENST00000396858 HIRIP3Q9BW71 556 aaPredicted RBP19.91■□□□□ 0.78
GAPDH-203ENST00000396858 METP08581 1390 aa19.91■□□□□ 0.78
GAPDH-203ENST00000396858 YTHDC2Q9H6S0 1430 aaKnown RBP19.9■□□□□ 0.78
GAPDH-203ENST00000396858 KNDC1Q76NI1 1749 aa19.9■□□□□ 0.78
GAPDH-203ENST00000396858 NCKAP5LQ9HCH0 1330 aa19.89■□□□□ 0.77
GAPDH-203ENST00000396858 EIF3AQ14152 1382 aaKnown RBP19.88■□□□□ 0.77
GAPDH-203ENST00000396858 CPS1P31327 1500 aa19.87■□□□□ 0.77
GAPDH-203ENST00000396858 SLC26A8Q96RN1 970 aa19.87■□□□□ 0.77
GAPDH-203ENST00000396858 LRPPRCP42704 1394 aaKnown RBP19.86■□□□□ 0.77
GAPDH-203ENST00000396858 QRICH2Q9H0J4 1663 aa19.86■□□□□ 0.77
GAPDH-203ENST00000396858 XRN1Q8IZH2 1706 aaKnown RBP19.85■□□□□ 0.77
GAPDH-203ENST00000396858 DLC1Q96QB1 1528 aa19.85■□□□□ 0.77
GAPDH-203ENST00000396858 STRCQ7RTU9 1775 aa19.85■□□□□ 0.77
GAPDH-203ENST00000396858 PTPRUQ92729 1446 aa19.85■□□□□ 0.77
GAPDH-203ENST00000396858 ZNF316A6NFI3 1004 aaPredicted RBP19.84■□□□□ 0.77
GAPDH-203ENST00000396858 STK26Q9P289 416 aa19.84■□□□□ 0.77
GAPDH-203ENST00000396858 TRAK1Q9UPV9 953 aa19.84■□□□□ 0.77
GAPDH-203ENST00000396858 ST20-MTHFSA0A0A6YYL1 179 aa19.82■□□□□ 0.76
GAPDH-203ENST00000396858 TECPR2O15040 1411 aa19.82■□□□□ 0.76
GAPDH-203ENST00000396858 NWD1Q149M9 1564 aa19.8■□□□□ 0.76
GAPDH-203ENST00000396858 TBX22Q9Y458 520 aa19.8■□□□□ 0.76
GAPDH-203ENST00000396858 CENPJQ9HC77 1338 aaPredicted RBP19.78■□□□□ 0.76
GAPDH-203ENST00000396858 PTCH1Q13635 1447 aa19.78■□□□□ 0.76
GAPDH-203ENST00000396858 ABCC11Q96J66 1382 aa19.78■□□□□ 0.76
GAPDH-203ENST00000396858 PIK3R4Q99570 1358 aa19.78■□□□□ 0.76
GAPDH-203ENST00000396858 ROBO2Q9HCK4 1378 aa19.77■□□□□ 0.76
GAPDH-203ENST00000396858 PLEKHH1Q9ULM0 1364 aa19.77■□□□□ 0.76
GAPDH-203ENST00000396858 DISP3Q9P2K9 1392 aa19.76■□□□□ 0.75
GAPDH-203ENST00000396858 TESK2Q96S53 571 aa19.76■□□□□ 0.75
GAPDH-203ENST00000396858 CHD2O14647 1828 aaKnown RBP19.75■□□□□ 0.75
GAPDH-203ENST00000396858 TULP4Q9NRJ4 1543 aa19.75■□□□□ 0.75
GAPDH-203ENST00000396858 SBNO2Q9Y2G9 1366 aa19.74■□□□□ 0.75
GAPDH-203ENST00000396858 SAFB2Q14151 953 aaKnown RBP eCLIP19.74■□□□□ 0.75
GAPDH-203ENST00000396858 PRAM1Q96QH2 718 aa19.74■□□□□ 0.75
GAPDH-203ENST00000396858 FAM135BQ49AJ0 1406 aa19.74■□□□□ 0.75
GAPDH-203ENST00000396858 CCDC7Q96M83 1385 aa19.72■□□□□ 0.75
GAPDH-203ENST00000396858 AMOTL2Q9Y2J4 779 aa19.72■□□□□ 0.75
GAPDH-203ENST00000396858 C11orf95C9JLR9 678 aaPredicted RBP19.71■□□□□ 0.75
GAPDH-203ENST00000396858 KIF7Q2M1P5 1343 aa19.71■□□□□ 0.75
GAPDH-203ENST00000396858 WASHC2AQ641Q2 1341 aa19.71■□□□□ 0.75
GAPDH-203ENST00000396858 KCNA6P17658 529 aa19.7■□□□□ 0.74
GAPDH-203ENST00000396858 POGKQ9P215 609 aa19.7■□□□□ 0.74
GAPDH-203ENST00000396858 NKTRP30414 1462 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms