RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
SCAF11-204ENST00000395454 DCAF11Q8TEB1 546 aa21.38■■□□□ 1.01
SCAF11-204ENST00000395454 MIER1Q8N108 512 aa21.37■■□□□ 1.01
SCAF11-204ENST00000395454 TMEM2Q9UHN6 1383 aa21.37■■□□□ 1.01
SCAF11-204ENST00000395454 KDM2AQ9Y2K7 1162 aa21.36■■□□□ 1.01
SCAF11-204ENST00000395454 HSPA2P54652 639 aa21.35■■□□□ 1.01
SCAF11-204ENST00000395454 RPGRIP1LQ68CZ1 1315 aa21.35■■□□□ 1.01
SCAF11-204ENST00000395454 NEXMIFQ5QGS0 1516 aa21.35■■□□□ 1.01
SCAF11-204ENST00000395454 RIMS2Q9UQ26 1411 aa21.35■■□□□ 1.01
SCAF11-204ENST00000395454 PPLO60437 1756 aa21.34■■□□□ 1.01
SCAF11-204ENST00000395454 SLIT1O75093 1534 aa21.33■■□□□ 1.01
SCAF11-204ENST00000395454 HDGFP51858 240 aaKnown RBP21.33■■□□□ 1
SCAF11-204ENST00000395454 ZFYVE9O95405 1425 aa21.32■■□□□ 1
SCAF11-204ENST00000395454 TXNDC2Q86VQ3 553 aa21.32■■□□□ 1
SCAF11-204ENST00000395454 EID1Q9Y6B2 187 aa21.32■■□□□ 1
SCAF11-204ENST00000395454 IFT172Q9UG01 1749 aa21.32■■□□□ 1
SCAF11-204ENST00000395454 ARHGAP23Q9P227 1491 aa21.32■■□□□ 1
SCAF11-204ENST00000395454 VGFO15240 615 aaPredicted RBP21.31■■□□□ 1
SCAF11-204ENST00000395454 NBPF8Q3BBV2 869 aa21.31■■□□□ 1
SCAF11-204ENST00000395454 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.31■■□□□ 1
SCAF11-204ENST00000395454 SENP3Q9H4L4 574 aaPredicted RBP21.31■■□□□ 1
SCAF11-204ENST00000395454 LTKP29376 864 aa21.3■■□□□ 1
SCAF11-204ENST00000395454 ANKLE2Q86XL3 938 aa21.29■■□□□ 1
SCAF11-204ENST00000395454 ADGRF5Q8IZF2 1346 aa21.28■■□□□ 1
SCAF11-204ENST00000395454 SCAF11Q99590 1463 aaKnown RBP21.28■■□□□ 1
SCAF11-204ENST00000395454 POLR1AO95602 1720 aaPredicted RBP21.28■■□□□ 1
SCAF11-204ENST00000395454 MYOM2P54296 1465 aa21.27■■□□□ 1
SCAF11-204ENST00000395454 STAC3Q96MF2 364 aa21.27■■□□□ 1
SCAF11-204ENST00000395454 RALGAPBQ86X10 1494 aa21.26■□□□□ 0.99
SCAF11-204ENST00000395454 BCANQ96GW7 911 aa21.25■□□□□ 0.99
SCAF11-204ENST00000395454 NCKAP5LQ9HCH0 1330 aa21.24■□□□□ 0.99
SCAF11-204ENST00000395454 EIF4G2P78344 907 aaKnown RBP eCLIP21.24■□□□□ 0.991e-13■■■■■ 57.3
SCAF11-204ENST00000395454 PRAG1Q86YV5 1406 aa21.22■□□□□ 0.99
SCAF11-204ENST00000395454 HSPA5P11021 654 aaKnown RBP21.22■□□□□ 0.99
SCAF11-204ENST00000395454 PIK3C2GO75747 1445 aa21.22■□□□□ 0.99
SCAF11-204ENST00000395454 NRXN1Q9ULB1 1477 aa21.21■□□□□ 0.99
SCAF11-204ENST00000395454 PLEKHG1Q9ULL1 1385 aa21.21■□□□□ 0.99
SCAF11-204ENST00000395454 HIRIP3Q9BW71 556 aaPredicted RBP21.19■□□□□ 0.98
SCAF11-204ENST00000395454 STRCQ7RTU9 1775 aa21.18■□□□□ 0.98
SCAF11-204ENST00000395454 IQGAP1P46940 1657 aa21.18■□□□□ 0.98
SCAF11-204ENST00000395454 NPHP4O75161 1426 aaPredicted RBP21.17■□□□□ 0.98
SCAF11-204ENST00000395454 DDX10Q13206 875 aaKnown RBP21.17■□□□□ 0.98
SCAF11-204ENST00000395454 TRPM1Q7Z4N2 1603 aa21.17■□□□□ 0.98
SCAF11-204ENST00000395454 MED14O60244 1454 aa21.17■□□□□ 0.98
SCAF11-204ENST00000395454 SETBP1Q9Y6X0 1596 aa21.16■□□□□ 0.98
SCAF11-204ENST00000395454 CFAP70Q5T0N1 1121 aa21.16■□□□□ 0.98
SCAF11-204ENST00000395454 SLC26A8Q96RN1 970 aa21.16■□□□□ 0.98
SCAF11-204ENST00000395454 LAMC1P11047 1609 aa21.16■□□□□ 0.98
SCAF11-204ENST00000395454 NRXN3Q9Y4C0 1643 aa21.16■□□□□ 0.98
SCAF11-204ENST00000395454 WASHC2AQ641Q2 1341 aa21.14■□□□□ 0.97
SCAF11-204ENST00000395454 ALKQ9UM73 1620 aa21.14■□□□□ 0.97
SCAF11-204ENST00000395454 C14orf93Q9H972 538 aaKnown RBP21.14■□□□□ 0.97
SCAF11-204ENST00000395454 ADAMTS13Q76LX8 1427 aa21.13■□□□□ 0.97
SCAF11-204ENST00000395454 ROCK2O75116 1388 aaKnown RBP21.11■□□□□ 0.97
SCAF11-204ENST00000395454 NBPF1Q3BBV0 1214 aa21.11■□□□□ 0.97
SCAF11-204ENST00000395454 USP47Q96K76 1375 aa21.1■□□□□ 0.97
SCAF11-204ENST00000395454 KIAA1210Q9ULL0 1709 aa21.1■□□□□ 0.97
SCAF11-204ENST00000395454 GPRASP1Q5JY77 1395 aa21.1■□□□□ 0.97
SCAF11-204ENST00000395454 CCDC7Q96M83 1385 aa21.1■□□□□ 0.97
SCAF11-204ENST00000395454 TMEM132EQ6IEE7 984 aa21.1■□□□□ 0.97
SCAF11-204ENST00000395454 SETD1AO15047 1707 aaKnown RBP21.09■□□□□ 0.97
SCAF11-204ENST00000395454 TBX22Q9Y458 520 aa21.09■□□□□ 0.97
SCAF11-204ENST00000395454 DIP2AQ14689 1571 aa21.08■□□□□ 0.97
SCAF11-204ENST00000395454 CENPBP07199 599 aaPredicted RBP21.08■□□□□ 0.97
SCAF11-204ENST00000395454 METP08581 1390 aa21.08■□□□□ 0.96
SCAF11-204ENST00000395454 DMRT2Q9Y5R5 561 aa21.07■□□□□ 0.96
SCAF11-204ENST00000395454 CARD11Q9BXL7 1154 aa21.05■□□□□ 0.96
SCAF11-204ENST00000395454 ADGRB1O14514 1584 aa21.05■□□□□ 0.96
SCAF11-204ENST00000395454 ASXL1Q8IXJ9 1541 aa21.04■□□□□ 0.96
SCAF11-204ENST00000395454 C11orf95C9JLR9 678 aaPredicted RBP21.03■□□□□ 0.96
SCAF11-204ENST00000395454 STK26Q9P289 416 aa21.03■□□□□ 0.96
SCAF11-204ENST00000395454 CCER2I3L3R5 266 aa21.01■□□□□ 0.95
SCAF11-204ENST00000395454 YTHDC2Q9H6S0 1430 aaKnown RBP21.01■□□□□ 0.95
SCAF11-204ENST00000395454 PIK3R4Q99570 1358 aa21■□□□□ 0.95
SCAF11-204ENST00000395454 KIF7Q2M1P5 1343 aa21■□□□□ 0.95
SCAF11-204ENST00000395454 TRAK1Q9UPV9 953 aa21■□□□□ 0.95
SCAF11-204ENST00000395454 AMOTL2Q9Y2J4 779 aa20.99■□□□□ 0.95
SCAF11-204ENST00000395454 PTPRUQ92729 1446 aa20.98■□□□□ 0.95
SCAF11-204ENST00000395454 CHD2O14647 1828 aaKnown RBP20.98■□□□□ 0.95
SCAF11-204ENST00000395454 LRPPRCP42704 1394 aaKnown RBP20.97■□□□□ 0.95
SCAF11-204ENST00000395454 ANP32CO43423 234 aa20.97■□□□□ 0.95
SCAF11-204ENST00000395454 KCNA6P17658 529 aa20.96■□□□□ 0.95
SCAF11-204ENST00000395454 ABCC11Q96J66 1382 aa20.94■□□□□ 0.94
SCAF11-204ENST00000395454 ZNF335Q9H4Z2 1342 aaPredicted RBP20.94■□□□□ 0.94
SCAF11-204ENST00000395454 XRN1Q8IZH2 1706 aaKnown RBP20.93■□□□□ 0.94
SCAF11-204ENST00000395454 KNDC1Q76NI1 1749 aa20.92■□□□□ 0.94
SCAF11-204ENST00000395454 EIF3AQ14152 1382 aaKnown RBP20.92■□□□□ 0.94
SCAF11-204ENST00000395454 YTHDC1Q96MU7 727 aaKnown RBP20.92■□□□□ 0.94
SCAF11-204ENST00000395454 ARHGEF28Q8N1W1 1705 aaKnown RBP20.91■□□□□ 0.94
SCAF11-204ENST00000395454 TECPR2O15040 1411 aa20.91■□□□□ 0.94
SCAF11-204ENST00000395454 NWD1Q149M9 1564 aa20.91■□□□□ 0.94
SCAF11-204ENST00000395454 STRCP1A6NGW2 1772 aa20.91■□□□□ 0.94
SCAF11-204ENST00000395454 ROBO2Q9HCK4 1378 aa20.91■□□□□ 0.94
SCAF11-204ENST00000395454 SAFB2Q14151 953 aaKnown RBP eCLIP20.9■□□□□ 0.94
SCAF11-204ENST00000395454 PRAM1Q96QH2 718 aa20.9■□□□□ 0.94
SCAF11-204ENST00000395454 CPS1P31327 1500 aa20.9■□□□□ 0.94
SCAF11-204ENST00000395454 WAPLQ7Z5K2 1190 aa20.9■□□□□ 0.94
SCAF11-204ENST00000395454 POGKQ9P215 609 aa20.9■□□□□ 0.94
SCAF11-204ENST00000395454 PTCH1Q13635 1447 aa20.9■□□□□ 0.94
SCAF11-204ENST00000395454 DLC1Q96QB1 1528 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms