RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 TMEM2Q9UHN6 1383 aa27.29■■□□□ 1.96
LMNB1-202ENST00000395354 DCAF11Q8TEB1 546 aa27.29■■□□□ 1.96
LMNB1-202ENST00000395354 LMTK3Q96Q04 1460 aa27.28■■□□□ 1.96
LMNB1-202ENST00000395354 HDGFP51858 240 aaKnown RBP27.27■■□□□ 1.96
LMNB1-202ENST00000395354 NUTM2DQ5VT03 806 aaPredicted RBP27.26■■□□□ 1.96
LMNB1-202ENST00000395354 KDM2AQ9Y2K7 1162 aa27.26■■□□□ 1.96
LMNB1-202ENST00000395354 HSPA2P54652 639 aa27.26■■□□□ 1.95
LMNB1-202ENST00000395354 RIMS2Q9UQ26 1411 aa27.26■■□□□ 1.95
LMNB1-202ENST00000395354 TXNDC2Q86VQ3 553 aa27.24■■□□□ 1.95
LMNB1-202ENST00000395354 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.24■■□□□ 1.95
LMNB1-202ENST00000395354 EID1Q9Y6B2 187 aa27.24■■□□□ 1.95
LMNB1-202ENST00000395354 SLIT1O75093 1534 aa27.23■■□□□ 1.95
LMNB1-202ENST00000395354 ARHGAP23Q9P227 1491 aa27.23■■□□□ 1.95
LMNB1-202ENST00000395354 VGFO15240 615 aaPredicted RBP27.22■■□□□ 1.95
LMNB1-202ENST00000395354 LTKP29376 864 aa27.22■■□□□ 1.95
LMNB1-202ENST00000395354 NEXMIFQ5QGS0 1516 aa27.22■■□□□ 1.95
LMNB1-202ENST00000395354 ZFYVE9O95405 1425 aa27.22■■□□□ 1.95
LMNB1-202ENST00000395354 ANKLE2Q86XL3 938 aa27.22■■□□□ 1.95
LMNB1-202ENST00000395354 STAC3Q96MF2 364 aa27.22■■□□□ 1.95
LMNB1-202ENST00000395354 NBPF8Q3BBV2 869 aa27.2■■□□□ 1.94
LMNB1-202ENST00000395354 PPLO60437 1756 aa27.19■■□□□ 1.94
LMNB1-202ENST00000395354 IFT172Q9UG01 1749 aa27.17■■□□□ 1.94
LMNB1-202ENST00000395354 ADGRF5Q8IZF2 1346 aa27.17■■□□□ 1.94
LMNB1-202ENST00000395354 EIF4G2P78344 907 aaKnown RBP eCLIP27.15■■□□□ 1.945e-6■■□□□ 14.3
LMNB1-202ENST00000395354 NCKAP5LQ9HCH0 1330 aa27.15■■□□□ 1.94
LMNB1-202ENST00000395354 SCAF11Q99590 1463 aaKnown RBP27.14■■□□□ 1.94
LMNB1-202ENST00000395354 SENP3Q9H4L4 574 aaPredicted RBP27.14■■□□□ 1.93
LMNB1-202ENST00000395354 MYOM2P54296 1465 aa27.13■■□□□ 1.93
LMNB1-202ENST00000395354 BCANQ96GW7 911 aa27.12■■□□□ 1.93
LMNB1-202ENST00000395354 MIER1Q8N108 512 aa27.1■■□□□ 1.93
LMNB1-202ENST00000395354 HSPA5P11021 654 aaKnown RBP27.09■■□□□ 1.93
LMNB1-202ENST00000395354 PLEKHG1Q9ULL1 1385 aa27.08■■□□□ 1.93
LMNB1-202ENST00000395354 RALGAPBQ86X10 1494 aa27.08■■□□□ 1.93
LMNB1-202ENST00000395354 NRXN1Q9ULB1 1477 aa27.07■■□□□ 1.92
LMNB1-202ENST00000395354 PRAG1Q86YV5 1406 aa27.07■■□□□ 1.92
LMNB1-202ENST00000395354 HIRIP3Q9BW71 556 aaPredicted RBP27.05■■□□□ 1.92
LMNB1-202ENST00000395354 POLR1AO95602 1720 aaPredicted RBP27.05■■□□□ 1.92
LMNB1-202ENST00000395354 PIK3C2GO75747 1445 aa27.05■■□□□ 1.92
LMNB1-202ENST00000395354 MED14O60244 1454 aa27.04■■□□□ 1.92
LMNB1-202ENST00000395354 NPHP4O75161 1426 aaPredicted RBP27.03■■□□□ 1.92
LMNB1-202ENST00000395354 STRCQ7RTU9 1775 aa27.03■■□□□ 1.92
LMNB1-202ENST00000395354 CFAP70Q5T0N1 1121 aa27.02■■□□□ 1.92
LMNB1-202ENST00000395354 SLC26A8Q96RN1 970 aa27.02■■□□□ 1.92
LMNB1-202ENST00000395354 C14orf93Q9H972 538 aaKnown RBP27.02■■□□□ 1.92
LMNB1-202ENST00000395354 SETBP1Q9Y6X0 1596 aa26.99■■□□□ 1.91
LMNB1-202ENST00000395354 DDX10Q13206 875 aaKnown RBP26.98■■□□□ 1.91
LMNB1-202ENST00000395354 TBX22Q9Y458 520 aa26.98■■□□□ 1.91
LMNB1-202ENST00000395354 ADAMTS13Q76LX8 1427 aa26.98■■□□□ 1.91
LMNB1-202ENST00000395354 IQGAP1P46940 1657 aa26.97■■□□□ 1.91
LMNB1-202ENST00000395354 NRXN3Q9Y4C0 1643 aa26.97■■□□□ 1.91
LMNB1-202ENST00000395354 DMRT2Q9Y5R5 561 aa26.97■■□□□ 1.91
LMNB1-202ENST00000395354 ALKQ9UM73 1620 aa26.96■■□□□ 1.91
LMNB1-202ENST00000395354 NBPF1Q3BBV0 1214 aa26.95■■□□□ 1.9
LMNB1-202ENST00000395354 TMEM132EQ6IEE7 984 aa26.93■■□□□ 1.9
LMNB1-202ENST00000395354 TRPM1Q7Z4N2 1603 aa26.93■■□□□ 1.9
LMNB1-202ENST00000395354 USP47Q96K76 1375 aa26.93■■□□□ 1.9
LMNB1-202ENST00000395354 KIAA1210Q9ULL0 1709 aa26.91■■□□□ 1.9
LMNB1-202ENST00000395354 LAMC1P11047 1609 aa26.91■■□□□ 1.9
LMNB1-202ENST00000395354 METP08581 1390 aa26.9■■□□□ 1.9
LMNB1-202ENST00000395354 WASHC2AQ641Q2 1341 aa26.9■■□□□ 1.9
LMNB1-202ENST00000395354 ROCK2O75116 1388 aaKnown RBP26.9■■□□□ 1.9
LMNB1-202ENST00000395354 CARD11Q9BXL7 1154 aa26.89■■□□□ 1.9
LMNB1-202ENST00000395354 GPRASP1Q5JY77 1395 aa26.89■■□□□ 1.89
LMNB1-202ENST00000395354 DIP2AQ14689 1571 aa26.89■■□□□ 1.89
LMNB1-202ENST00000395354 SETD1AO15047 1707 aaKnown RBP26.87■■□□□ 1.89
LMNB1-202ENST00000395354 CCDC7Q96M83 1385 aa26.87■■□□□ 1.89
LMNB1-202ENST00000395354 PIK3R4Q99570 1358 aa26.84■■□□□ 1.89
LMNB1-202ENST00000395354 ADGRB1O14514 1584 aa26.84■■□□□ 1.89
LMNB1-202ENST00000395354 STK26Q9P289 416 aa26.84■■□□□ 1.89
LMNB1-202ENST00000395354 ASXL1Q8IXJ9 1541 aa26.83■■□□□ 1.89
LMNB1-202ENST00000395354 AMOTL2Q9Y2J4 779 aa26.81■■□□□ 1.88
LMNB1-202ENST00000395354 YTHDC2Q9H6S0 1430 aaKnown RBP26.81■■□□□ 1.88
LMNB1-202ENST00000395354 LRPPRCP42704 1394 aaKnown RBP26.8■■□□□ 1.88
LMNB1-202ENST00000395354 KCNA6P17658 529 aa26.8■■□□□ 1.88
LMNB1-202ENST00000395354 PTPRUQ92729 1446 aa26.79■■□□□ 1.88
LMNB1-202ENST00000395354 C11orf95C9JLR9 678 aaPredicted RBP26.79■■□□□ 1.88
LMNB1-202ENST00000395354 TRAK1Q9UPV9 953 aa26.79■■□□□ 1.88
LMNB1-202ENST00000395354 ABCC11Q96J66 1382 aa26.77■■□□□ 1.88
LMNB1-202ENST00000395354 CHD2O14647 1828 aaKnown RBP26.77■■□□□ 1.88
LMNB1-202ENST00000395354 KIF7Q2M1P5 1343 aa26.77■■□□□ 1.88
LMNB1-202ENST00000395354 ANP32CO43423 234 aa26.75■■□□□ 1.87
LMNB1-202ENST00000395354 ZNF335Q9H4Z2 1342 aaPredicted RBP26.73■■□□□ 1.87
LMNB1-202ENST00000395354 SIRT1Q96EB6 747 aa26.71■■□□□ 1.87
LMNB1-202ENST00000395354 ST20-MTHFSA0A0A6YYL1 179 aa26.7■■□□□ 1.86
LMNB1-202ENST00000395354 TECPR2O15040 1411 aa26.7■■□□□ 1.86
LMNB1-202ENST00000395354 CENPBP07199 599 aaPredicted RBP26.7■■□□□ 1.86
LMNB1-202ENST00000395354 XRN1Q8IZH2 1706 aaKnown RBP26.69■■□□□ 1.86
LMNB1-202ENST00000395354 CCER2I3L3R5 266 aa26.69■■□□□ 1.86
LMNB1-202ENST00000395354 ROBO2Q9HCK4 1378 aa26.69■■□□□ 1.86
LMNB1-202ENST00000395354 WAPLQ7Z5K2 1190 aa26.68■■□□□ 1.86
LMNB1-202ENST00000395354 PRAM1Q96QH2 718 aa26.68■■□□□ 1.86
LMNB1-202ENST00000395354 POGKQ9P215 609 aa26.68■■□□□ 1.86
LMNB1-202ENST00000395354 NWD1Q149M9 1564 aa26.67■■□□□ 1.86
LMNB1-202ENST00000395354 DLC1Q96QB1 1528 aa26.67■■□□□ 1.86
LMNB1-202ENST00000395354 PROSER2Q86WR7 435 aaPredicted RBP26.67■■□□□ 1.86
LMNB1-202ENST00000395354 EIF3AQ14152 1382 aaKnown RBP26.66■■□□□ 1.86
LMNB1-202ENST00000395354 KNDC1Q76NI1 1749 aa26.66■■□□□ 1.86
LMNB1-202ENST00000395354 STRCP1A6NGW2 1772 aa26.66■■□□□ 1.86
LMNB1-202ENST00000395354 PTCH1Q13635 1447 aa26.65■■□□□ 1.86
LMNB1-202ENST00000395354 FAM135BQ49AJ0 1406 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms