RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 CFAP70Q5T0N1 1121 aa13.88□□□□□ -0.19
BBS4-202ENST00000395205 USP47Q96K76 1375 aa13.87□□□□□ -0.19
BBS4-202ENST00000395205 MROH2AA6NES4 1674 aa13.87□□□□□ -0.19
BBS4-202ENST00000395205 MYT1Q01538 1121 aa13.87□□□□□ -0.19
BBS4-202ENST00000395205 MYOM2P54296 1465 aa13.87□□□□□ -0.19
BBS4-202ENST00000395205 FER1L4A9Z1Z3 1794 aa13.85□□□□□ -0.19
BBS4-202ENST00000395205 HDGFP51858 240 aaKnown RBP13.85□□□□□ -0.19
BBS4-202ENST00000395205 TMEM131LA2VDJ0 1609 aa13.85□□□□□ -0.19
BBS4-202ENST00000395205 A2ML1A8K2U0 1454 aa13.84□□□□□ -0.19
BBS4-202ENST00000395205 GPRASP1Q5JY77 1395 aa13.84□□□□□ -0.19
BBS4-202ENST00000395205 ST20-MTHFSA0A0A6YYL1 179 aa13.84□□□□□ -0.19
BBS4-202ENST00000395205 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.84□□□□□ -0.19
BBS4-202ENST00000395205 C14orf93Q9H972 538 aaKnown RBP13.84□□□□□ -0.19
BBS4-202ENST00000395205 MADDQ8WXG6 1647 aa13.84□□□□□ -0.19
BBS4-202ENST00000395205 TRPM1Q7Z4N2 1603 aa13.82□□□□□ -0.2
BBS4-202ENST00000395205 RIMS2Q9UQ26 1411 aa13.82□□□□□ -0.2
BBS4-202ENST00000395205 NLRP1Q9C000 1473 aa13.82□□□□□ -0.2
BBS4-202ENST00000395205 NRXN1Q9ULB1 1477 aa13.82□□□□□ -0.2
BBS4-202ENST00000395205 NEXMIFQ5QGS0 1516 aa13.82□□□□□ -0.2
BBS4-202ENST00000395205 C3P01024 1663 aa13.82□□□□□ -0.2
BBS4-202ENST00000395205 ZFYVE9O95405 1425 aa13.81□□□□□ -0.2
BBS4-202ENST00000395205 DDX10Q13206 875 aaKnown RBP13.81□□□□□ -0.2
BBS4-202ENST00000395205 PIK3C2GO75747 1445 aa13.81□□□□□ -0.2
BBS4-202ENST00000395205 ADAMTSL3P82987 1691 aa13.81□□□□□ -0.2
BBS4-202ENST00000395205 THEMISQ8N1K5 641 aaPredicted RBP13.81□□□□□ -0.2
BBS4-202ENST00000395205 RIMS1Q86UR5 1692 aaKnown RBP13.8□□□□□ -0.2
BBS4-202ENST00000395205 TMEM132EQ6IEE7 984 aa13.8□□□□□ -0.2
BBS4-202ENST00000395205 BCANQ96GW7 911 aa13.8□□□□□ -0.2
BBS4-202ENST00000395205 C11orf95C9JLR9 678 aaPredicted RBP13.8□□□□□ -0.2
BBS4-202ENST00000395205 TMEM2Q9UHN6 1383 aa13.79□□□□□ -0.2
BBS4-202ENST00000395205 PPLO60437 1756 aa13.78□□□□□ -0.2
BBS4-202ENST00000395205 IFT172Q9UG01 1749 aa13.78□□□□□ -0.2
BBS4-202ENST00000395205 WASHC2AQ641Q2 1341 aa13.78□□□□□ -0.2
BBS4-202ENST00000395205 POLR3GLQ9BT43 218 aa13.78□□□□□ -0.2
BBS4-202ENST00000395205 EID1Q9Y6B2 187 aa13.78□□□□□ -0.2
BBS4-202ENST00000395205 TXNDC2Q86VQ3 553 aa13.78□□□□□ -0.2
BBS4-202ENST00000395205 SCAF11Q99590 1463 aaKnown RBP13.77□□□□□ -0.21
BBS4-202ENST00000395205 TRAK1Q9UPV9 953 aa13.76□□□□□ -0.21
BBS4-202ENST00000395205 PTPRMP28827 1452 aa13.76□□□□□ -0.21
BBS4-202ENST00000395205 LTKP29376 864 aa13.75□□□□□ -0.21
BBS4-202ENST00000395205 MYO5BQ9ULV0 1848 aa13.75□□□□□ -0.21
BBS4-202ENST00000395205 EIF3AQ14152 1382 aaKnown RBP13.75□□□□□ -0.21
BBS4-202ENST00000395205 CCDC7Q96M83 1385 aa13.75□□□□□ -0.21
BBS4-202ENST00000395205 KIF7Q2M1P5 1343 aa13.75□□□□□ -0.21
BBS4-202ENST00000395205 STK26Q9P289 416 aa13.74□□□□□ -0.21
BBS4-202ENST00000395205 LAMC1P11047 1609 aa13.74□□□□□ -0.21
BBS4-202ENST00000395205 KIAA1210Q9ULL0 1709 aa13.73□□□□□ -0.21
BBS4-202ENST00000395205 TMF1P82094 1093 aa13.73□□□□□ -0.21
BBS4-202ENST00000395205 TESK2Q96S53 571 aa13.73□□□□□ -0.21
BBS4-202ENST00000395205 UBR1Q8IWV7 1749 aa13.72□□□□□ -0.21
BBS4-202ENST00000395205 SETBP1Q9Y6X0 1596 aa13.71□□□□□ -0.21
BBS4-202ENST00000395205 KDM4FA0A1W2PPD8 638 aa13.71□□□□□ -0.21
BBS4-202ENST00000395205 KDM5AP29375 1690 aaKnown RBP13.71□□□□□ -0.22
BBS4-202ENST00000395205 CENPJQ9HC77 1338 aaPredicted RBP13.7□□□□□ -0.22
BBS4-202ENST00000395205 MYO3AQ8NEV4 1616 aa13.7□□□□□ -0.22
BBS4-202ENST00000395205 SLC24A1O60721 1099 aa13.7□□□□□ -0.22
BBS4-202ENST00000395205 ADGRB1O14514 1584 aa13.7□□□□□ -0.22
BBS4-202ENST00000395205 ALKQ9UM73 1620 aa13.69□□□□□ -0.22
BBS4-202ENST00000395205 ANKLE2Q86XL3 938 aa13.69□□□□□ -0.22
BBS4-202ENST00000395205 PLEKHG1Q9ULL1 1385 aa13.69□□□□□ -0.22
BBS4-202ENST00000395205 MIER1Q8N108 512 aa13.69□□□□□ -0.22
BBS4-202ENST00000395205 CEP170BQ9Y4F5 1589 aaPredicted RBP13.69□□□□□ -0.22
BBS4-202ENST00000395205 SLC26A8Q96RN1 970 aa13.68□□□□□ -0.22
BBS4-202ENST00000395205 ARHGAP23Q9P227 1491 aa13.68□□□□□ -0.22
BBS4-202ENST00000395205 SLIT1O75093 1534 aa13.68□□□□□ -0.22
BBS4-202ENST00000395205 CENPBP07199 599 aaPredicted RBP13.68□□□□□ -0.22
BBS4-202ENST00000395205 POGKQ9P215 609 aa13.68□□□□□ -0.22
BBS4-202ENST00000395205 CDCA8Q53HL2 280 aa13.67□□□□□ -0.22
BBS4-202ENST00000395205 DISP3Q9P2K9 1392 aa13.67□□□□□ -0.22
BBS4-202ENST00000395205 YTHDC2Q9H6S0 1430 aaKnown RBP13.67□□□□□ -0.22
BBS4-202ENST00000395205 SAFB2Q14151 953 aaKnown RBP eCLIP13.67□□□□□ -0.22
BBS4-202ENST00000395205 IQGAP1P46940 1657 aa13.67□□□□□ -0.22
BBS4-202ENST00000395205 METP08581 1390 aa13.66□□□□□ -0.22
BBS4-202ENST00000395205 PRAM1Q96QH2 718 aa13.66□□□□□ -0.22
BBS4-202ENST00000395205 LRPPRCP42704 1394 aaKnown RBP13.65□□□□□ -0.22
BBS4-202ENST00000395205 TBX22Q9Y458 520 aa13.65□□□□□ -0.22
BBS4-202ENST00000395205 ASXL1Q8IXJ9 1541 aa13.64□□□□□ -0.23
BBS4-202ENST00000395205 ANP32CO43423 234 aa13.64□□□□□ -0.23
BBS4-202ENST00000395205 ADAMTS13Q76LX8 1427 aa13.63□□□□□ -0.23
BBS4-202ENST00000395205 ABCC11Q96J66 1382 aa13.63□□□□□ -0.23
BBS4-202ENST00000395205 WAPLQ7Z5K2 1190 aa13.63□□□□□ -0.23
BBS4-202ENST00000395205 SETD1BQ9UPS6 1966 aaKnown RBP13.62□□□□□ -0.23
BBS4-202ENST00000395205 NCKAP5LQ9HCH0 1330 aa13.61□□□□□ -0.23
BBS4-202ENST00000395205 SBNO2Q9Y2G9 1366 aa13.61□□□□□ -0.23
BBS4-202ENST00000395205 EVC2Q86UK5 1308 aa13.61□□□□□ -0.23
BBS4-202ENST00000395205 MINK1Q8N4C8 1332 aaPredicted RBP13.61□□□□□ -0.23
BBS4-202ENST00000395205 NRXN3Q9Y4C0 1643 aa13.61□□□□□ -0.23
BBS4-202ENST00000395205 AMOTL2Q9Y2J4 779 aa13.6□□□□□ -0.23
BBS4-202ENST00000395205 SIRT1Q96EB6 747 aa13.59□□□□□ -0.23
BBS4-202ENST00000395205 ZNF142P52746 1687 aaPredicted RBP13.59□□□□□ -0.23
BBS4-202ENST00000395205 MED14O60244 1454 aa13.59□□□□□ -0.23
BBS4-202ENST00000395205 CNGB1Q14028 1251 aaPredicted RBP13.58□□□□□ -0.24
BBS4-202ENST00000395205 PANK3Q9H999 370 aa13.58□□□□□ -0.24
BBS4-202ENST00000395205 HSPA2P54652 639 aa13.57□□□□□ -0.24
BBS4-202ENST00000395205 SRPK2P78362 688 aaKnown RBP13.57□□□□□ -0.24
BBS4-202ENST00000395205 PLEKHH1Q9ULM0 1364 aa13.57□□□□□ -0.24
BBS4-202ENST00000395205 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
BBS4-202ENST00000395205 TMC1Q8TDI8 760 aa13.56□□□□□ -0.24
BBS4-202ENST00000395205 NPHP4O75161 1426 aaPredicted RBP13.56□□□□□ -0.24
BBS4-202ENST00000395205 DLC1Q96QB1 1528 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms