RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 NISCHQ9Y2I1 1504 aa22.56■■□□□ 1.2
BBS4-202ENST00000395205 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
BBS4-202ENST00000395205 ZCCHC6Q5VYS8 1495 aaKnown RBP18.89■□□□□ 0.61
BBS4-202ENST00000395205 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
BBS4-202ENST00000395205 ABCC9O60706 1549 aa18.88■□□□□ 0.61
BBS4-202ENST00000395205 DCAF1Q9Y4B6 1507 aa18.61■□□□□ 0.57
BBS4-202ENST00000395205 MYO15BQ96JP2 1530 aa18.45■□□□□ 0.54
BBS4-202ENST00000395205 NACADO15069 1562 aa18.42■□□□□ 0.54
BBS4-202ENST00000395205 SHROOM4Q9ULL8 1493 aa18.4■□□□□ 0.54
BBS4-202ENST00000395205 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
BBS4-202ENST00000395205 SCRIBQ14160 1630 aa18.13■□□□□ 0.49
BBS4-202ENST00000395205 PABPN1Q86U42 306 aaKnown RBP eCLIP17.84■□□□□ 0.45
BBS4-202ENST00000395205 UNC13AQ9UPW8 1703 aa17.79■□□□□ 0.44
BBS4-202ENST00000395205 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
BBS4-202ENST00000395205 SUPT5HO00267 1087 aaKnown RBP17.66■□□□□ 0.42
BBS4-202ENST00000395205 CECR2Q9BXF3 1484 aa17.57■□□□□ 0.4
BBS4-202ENST00000395205 RSF1Q96T23 1441 aaPredicted RBP17.47■□□□□ 0.39
BBS4-202ENST00000395205 MROH2BQ7Z745 1585 aa17.43■□□□□ 0.38
BBS4-202ENST00000395205 BAZ1AQ9NRL2 1556 aaPredicted RBP17.42■□□□□ 0.38
BBS4-202ENST00000395205 SMARCA4P51532 1647 aa17.34■□□□□ 0.37
BBS4-202ENST00000395205 WIZO95785 1651 aa17.24■□□□□ 0.35
BBS4-202ENST00000395205 EIF4G1Q04637 1599 aaKnown RBP17.22■□□□□ 0.35
BBS4-202ENST00000395205 ATAD2BQ9ULI0 1458 aa17.15■□□□□ 0.34
BBS4-202ENST00000395205 SMARCA2P51531 1590 aa17.11■□□□□ 0.33
BBS4-202ENST00000395205 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
BBS4-202ENST00000395205 TOP2AP11388 1531 aaKnown RBP17.07■□□□□ 0.32
BBS4-202ENST00000395205 BAZ1BQ9UIG0 1483 aaKnown RBP17.05■□□□□ 0.32
BBS4-202ENST00000395205 NCAPD3P42695 1498 aa17.03■□□□□ 0.32
BBS4-202ENST00000395205 CC2D2AQ9P2K1 1620 aa17.01■□□□□ 0.31
BBS4-202ENST00000395205 CCDC88BA6NC98 1476 aa16.94■□□□□ 0.3
BBS4-202ENST00000395205 HMGXB3Q12766 1538 aa16.94■□□□□ 0.3
BBS4-202ENST00000395205 DNAJC5BQ9UF47 199 aa16.84■□□□□ 0.29
BBS4-202ENST00000395205 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.27
BBS4-202ENST00000395205 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
BBS4-202ENST00000395205 TRIM41Q8WV44 630 aa16.61■□□□□ 0.25
BBS4-202ENST00000395205 CFTRP13569 1480 aa16.6■□□□□ 0.25
BBS4-202ENST00000395205 ABCC8Q09428 1581 aa16.5■□□□□ 0.23
BBS4-202ENST00000395205 NESP48681 1621 aa16.5■□□□□ 0.23
BBS4-202ENST00000395205 WRNQ14191 1432 aaPredicted RBP eCLIP16.46■□□□□ 0.23
BBS4-202ENST00000395205 LAMC3Q9Y6N6 1575 aa16.44■□□□□ 0.22
BBS4-202ENST00000395205 FANCD2Q9BXW9 1451 aa16.41■□□□□ 0.22
BBS4-202ENST00000395205 PDS5BQ9NTI5 1447 aa16.4■□□□□ 0.22
BBS4-202ENST00000395205 AEBP2Q6ZN18 517 aaPredicted RBP16.35■□□□□ 0.21
BBS4-202ENST00000395205 PRDM2Q13029 1718 aa16.34■□□□□ 0.21
BBS4-202ENST00000395205 SYNJ1O43426 1573 aa16.33■□□□□ 0.2
BBS4-202ENST00000395205 CEP164Q9UPV0 1460 aa16.32■□□□□ 0.2
BBS4-202ENST00000395205 FAM9AQ8IZU1 332 aaPredicted RBP16.32■□□□□ 0.2
BBS4-202ENST00000395205 CUX1P39880 1505 aa16.3■□□□□ 0.2
BBS4-202ENST00000395205 TOP2BQ02880 1626 aa16.27■□□□□ 0.19
BBS4-202ENST00000395205 BIVM-ERCC5R4GMW8 1640 aa16.22■□□□□ 0.19
BBS4-202ENST00000395205 ERCC6Q03468 1493 aa16.22■□□□□ 0.19
BBS4-202ENST00000395205 SOGA1O94964 1423 aa16.21■□□□□ 0.19
BBS4-202ENST00000395205 KIF21AQ7Z4S6 1674 aa16.2■□□□□ 0.18
BBS4-202ENST00000395205 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
BBS4-202ENST00000395205 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
BBS4-202ENST00000395205 DNMBPQ6XZF7 1577 aa16.18■□□□□ 0.18
BBS4-202ENST00000395205 LOC105371045A0A1W2PR82 267 aa16.17■□□□□ 0.18
BBS4-202ENST00000395205 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
BBS4-202ENST00000395205 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
BBS4-202ENST00000395205 RUSC2Q8N2Y8 1516 aa16.14■□□□□ 0.17
BBS4-202ENST00000395205 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
BBS4-202ENST00000395205 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
BBS4-202ENST00000395205 EEA1Q15075 1411 aa16.12■□□□□ 0.17
BBS4-202ENST00000395205 POLA1P09884 1462 aaPredicted RBP16.11■□□□□ 0.17
BBS4-202ENST00000395205 RAD54L2Q9Y4B4 1467 aa16.08■□□□□ 0.17
BBS4-202ENST00000395205 KIF27Q86VH2 1401 aa16.07■□□□□ 0.16
BBS4-202ENST00000395205 CUX2O14529 1486 aa16.06■□□□□ 0.16
BBS4-202ENST00000395205 WDR62O43379 1518 aa16.04■□□□□ 0.16
BBS4-202ENST00000395205 ABCA10Q8WWZ4 1543 aa16■□□□□ 0.15
BBS4-202ENST00000395205 THOC2Q8NI27 1593 aaKnown RBP15.99■□□□□ 0.15
BBS4-202ENST00000395205 TDRD9Q8NDG6 1382 aaKnown RBP15.98■□□□□ 0.15
BBS4-202ENST00000395205 IGF1RP08069 1367 aa15.96■□□□□ 0.15
BBS4-202ENST00000395205 UBTFP17480 764 aaKnown RBP15.95■□□□□ 0.14
BBS4-202ENST00000395205 IFT140Q96RY7 1462 aa15.95■□□□□ 0.14
BBS4-202ENST00000395205 TARBP1Q13395 1621 aaKnown RBP15.91■□□□□ 0.14
BBS4-202ENST00000395205 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
BBS4-202ENST00000395205 GOLGA3Q08378 1498 aa15.9■□□□□ 0.14
BBS4-202ENST00000395205 AQRO60306 1485 aaKnown RBP eCLIP15.89■□□□□ 0.132e-6■■■■■ 31
BBS4-202ENST00000395205 CARMIL1Q5VZK9 1371 aa15.89■□□□□ 0.13
BBS4-202ENST00000395205 PRXQ9BXM0 1461 aa15.88■□□□□ 0.13
BBS4-202ENST00000395205 RAPGEF2Q9Y4G8 1499 aa15.87■□□□□ 0.13
BBS4-202ENST00000395205 WDR97A6NE52 1622 aa15.86■□□□□ 0.13
BBS4-202ENST00000395205 ZNF608Q9ULD9 1512 aaPredicted RBP15.86■□□□□ 0.13
BBS4-202ENST00000395205 KIF21BO75037 1637 aa15.86■□□□□ 0.13
BBS4-202ENST00000395205 TNIKQ9UKE5 1360 aa15.84■□□□□ 0.13
BBS4-202ENST00000395205 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.13
BBS4-202ENST00000395205 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
BBS4-202ENST00000395205 GRIN2BQ13224 1484 aa15.8■□□□□ 0.12
BBS4-202ENST00000395205 RANGAP1P46060 587 aaPredicted RBP15.77■□□□□ 0.11
BBS4-202ENST00000395205 CUL7Q14999 1698 aa15.74■□□□□ 0.11
BBS4-202ENST00000395205 EIF4G3O43432 1585 aaKnown RBP15.74■□□□□ 0.11
BBS4-202ENST00000395205 FHAD1B1AJZ9 1412 aa15.73■□□□□ 0.11
BBS4-202ENST00000395205 CEP162Q5TB80 1403 aa15.73■□□□□ 0.11
BBS4-202ENST00000395205 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.1
BBS4-202ENST00000395205 PBRM1Q86U86 1689 aa15.7■□□□□ 0.1
BBS4-202ENST00000395205 FBLN2P98095 1184 aa15.69■□□□□ 0.1
BBS4-202ENST00000395205 CHMP7Q8WUX9 453 aaPredicted RBP15.69■□□□□ 0.1
BBS4-202ENST00000395205 CLIP1P30622 1438 aa15.66■□□□□ 0.1
BBS4-202ENST00000395205 MAGI1Q96QZ7 1491 aaPredicted RBP15.66■□□□□ 0.1
BBS4-202ENST00000395205 ADAMTS12P58397 1594 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms