RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 EIF3AQ14152 1382 aaKnown RBP13.66□□□□□ -0.22
ACTN1-203ENST00000394419 PLEKHH1Q9ULM0 1364 aa13.65□□□□□ -0.22
ACTN1-203ENST00000394419 PPM1GO15355 546 aaPredicted RBP13.65□□□□□ -0.23
ACTN1-203ENST00000394419 CENPQQ7L2Z9 268 aaPredicted RBP13.65□□□□□ -0.23
ACTN1-203ENST00000394419 PANK1Q8TE04 598 aa13.65□□□□□ -0.23
ACTN1-203ENST00000394419 U2AF1L5P0DN76 240 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-203ENST00000394419 U2AF1Q01081 240 aaKnown RBP eCLIP13.64□□□□□ -0.23
ACTN1-203ENST00000394419 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-203ENST00000394419 COL17A1Q9UMD9 1497 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-203ENST00000394419 CROCC2H7BZ55 1655 aa13.64□□□□□ -0.23
ACTN1-203ENST00000394419 ADCY10Q96PN6 1610 aa13.63□□□□□ -0.23
ACTN1-203ENST00000394419 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
ACTN1-203ENST00000394419 CENPJQ9HC77 1338 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-203ENST00000394419 KDM5DQ9BY66 1539 aa13.62□□□□□ -0.23
ACTN1-203ENST00000394419 CFAP53Q96M91 514 aa13.62□□□□□ -0.23
ACTN1-203ENST00000394419 ARXQ96QS3 562 aa13.62□□□□□ -0.23
ACTN1-203ENST00000394419 SRPK2P78362 688 aaKnown RBP13.62□□□□□ -0.23
ACTN1-203ENST00000394419 SLFN5Q08AF3 891 aa13.62□□□□□ -0.23
ACTN1-203ENST00000394419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.61□□□□□ -0.23
ACTN1-203ENST00000394419 TTC37Q6PGP7 1564 aa13.61□□□□□ -0.23
ACTN1-203ENST00000394419 E9PSI1 815 aa13.61□□□□□ -0.23
ACTN1-203ENST00000394419 PLCH2O75038 1416 aa13.61□□□□□ -0.23
ACTN1-203ENST00000394419 GPRASP1Q5JY77 1395 aa13.61□□□□□ -0.23
ACTN1-203ENST00000394419 FAM161AQ3B820 660 aa13.6□□□□□ -0.23
ACTN1-203ENST00000394419 ARHGEF5Q12774 1597 aa13.6□□□□□ -0.23
ACTN1-203ENST00000394419 ERCC6L2Q5T890 1561 aa13.6□□□□□ -0.23
ACTN1-203ENST00000394419 POLR1AO95602 1720 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-203ENST00000394419 MTHFSP49914 203 aa13.59□□□□□ -0.23
ACTN1-203ENST00000394419 CARD14Q9BXL6 1004 aa13.59□□□□□ -0.23
ACTN1-203ENST00000394419 DMRT2Q9Y5R5 561 aa13.59□□□□□ -0.23
ACTN1-203ENST00000394419 DUOX2Q9NRD8 1548 aa13.58□□□□□ -0.23
ACTN1-203ENST00000394419 FTSJ3Q8IY81 847 aaKnown RBP13.58□□□□□ -0.24
ACTN1-203ENST00000394419 MAGI2Q86UL8 1455 aa13.58□□□□□ -0.24
ACTN1-203ENST00000394419 SLC24A1O60721 1099 aa13.58□□□□□ -0.24
ACTN1-203ENST00000394419 TCP11L2Q8N4U5 519 aa13.58□□□□□ -0.24
ACTN1-203ENST00000394419 SPRYD3Q8NCJ5 442 aa13.58□□□□□ -0.24
ACTN1-203ENST00000394419 CDC42BPBQ9Y5S2 1711 aa13.57□□□□□ -0.24
ACTN1-203ENST00000394419 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
ACTN1-203ENST00000394419 SLKQ9H2G2 1235 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-203ENST00000394419 POGKQ9P215 609 aa13.57□□□□□ -0.24
ACTN1-203ENST00000394419 SCAF11Q99590 1463 aaKnown RBP13.56□□□□□ -0.24
ACTN1-203ENST00000394419 UPF2Q9HAU5 1272 aaKnown RBP13.56□□□□□ -0.24
ACTN1-203ENST00000394419 WWC1Q8IX03 1113 aa13.55□□□□□ -0.24
ACTN1-203ENST00000394419 PREX2Q70Z35 1606 aa13.54□□□□□ -0.24
ACTN1-203ENST00000394419 STAC3Q96MF2 364 aa13.54□□□□□ -0.24
ACTN1-203ENST00000394419 TRPM1Q7Z4N2 1603 aa13.54□□□□□ -0.24
ACTN1-203ENST00000394419 RAPGEF3O95398 923 aa13.54□□□□□ -0.24
ACTN1-203ENST00000394419 GGNBP2Q9H3C7 697 aa13.54□□□□□ -0.24
ACTN1-203ENST00000394419 ABCC2Q92887 1545 aa13.53□□□□□ -0.24
ACTN1-203ENST00000394419 MAPK8IP3Q9UPT6 1336 aa13.53□□□□□ -0.24
ACTN1-203ENST00000394419 IGHDP01880 384 aa13.53□□□□□ -0.24
ACTN1-203ENST00000394419 MINK1Q8N4C8 1332 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-203ENST00000394419 BLMP54132 1417 aaPredicted RBP13.52□□□□□ -0.24
ACTN1-203ENST00000394419 CFAP65Q6ZU64 1925 aaKnown RBP13.52□□□□□ -0.24
ACTN1-203ENST00000394419 NFKBIBQ15653 356 aa13.52□□□□□ -0.25
ACTN1-203ENST00000394419 RUNDC1Q96C34 613 aa13.52□□□□□ -0.25
ACTN1-203ENST00000394419 FANCAO15360 1455 aa13.52□□□□□ -0.25
ACTN1-203ENST00000394419 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
ACTN1-203ENST00000394419 TNNQ9UQP3 1299 aa13.51□□□□□ -0.25
ACTN1-203ENST00000394419 NSD3Q9BZ95 1437 aa13.51□□□□□ -0.25
ACTN1-203ENST00000394419 MLECQ14165 292 aa13.51□□□□□ -0.25
ACTN1-203ENST00000394419 IL27Q8NEV9 243 aa13.51□□□□□ -0.25
ACTN1-203ENST00000394419 TSR2Q969E8 191 aaKnown RBP13.51□□□□□ -0.25
ACTN1-203ENST00000394419 WDR7Q9Y4E6 1490 aa13.51□□□□□ -0.25
ACTN1-203ENST00000394419 SMC4Q9NTJ3 1288 aa13.5□□□□□ -0.25
ACTN1-203ENST00000394419 ADGRL1O94910 1474 aa13.5□□□□□ -0.25
ACTN1-203ENST00000394419 MAST1Q9Y2H9 1570 aa13.5□□□□□ -0.25
ACTN1-203ENST00000394419 NOS1P29475 1434 aa13.5□□□□□ -0.25
ACTN1-203ENST00000394419 PLPPR3Q6T4P5 718 aa13.49□□□□□ -0.25
ACTN1-203ENST00000394419 ASXL1Q8IXJ9 1541 aa13.49□□□□□ -0.25
ACTN1-203ENST00000394419 PRDM15P57071 1507 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-203ENST00000394419 ITPRIPQ8IWB1 547 aa13.49□□□□□ -0.25
ACTN1-203ENST00000394419 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.49□□□□□ -0.252e-7■■■■□ 20.7
ACTN1-203ENST00000394419 EIF2AK4Q9P2K8 1649 aaKnown RBP13.48□□□□□ -0.25
ACTN1-203ENST00000394419 ZMYM4Q5VZL5 1548 aa13.48□□□□□ -0.25
ACTN1-203ENST00000394419 CHD1O14646 1710 aa13.48□□□□□ -0.25
ACTN1-203ENST00000394419 MYO5CQ9NQX4 1742 aa13.48□□□□□ -0.25
ACTN1-203ENST00000394419 BECN1Q14457 450 aa13.48□□□□□ -0.25
ACTN1-203ENST00000394419 EVC2Q86UK5 1308 aa13.48□□□□□ -0.25
ACTN1-203ENST00000394419 ATP10AO60312 1499 aa13.48□□□□□ -0.25
ACTN1-203ENST00000394419 UGGT1Q9NYU2 1555 aa13.48□□□□□ -0.25
ACTN1-203ENST00000394419 MYH16Q9H6N6 1097 aa13.48□□□□□ -0.25
ACTN1-203ENST00000394419 FRAT2O75474 233 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-203ENST00000394419 NKTRP30414 1462 aaKnown RBP13.47□□□□□ -0.25
ACTN1-203ENST00000394419 VGFO15240 615 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-203ENST00000394419 C8orf34Q49A92 452 aa13.47□□□□□ -0.25
ACTN1-203ENST00000394419 USP35Q9P2H5 1018 aa13.47□□□□□ -0.25
ACTN1-203ENST00000394419 KDM2BQ8NHM5 1336 aa13.47□□□□□ -0.25
ACTN1-203ENST00000394419 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.26
ACTN1-203ENST00000394419 RWDD1Q9H446 243 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-203ENST00000394419 PMFBP1Q8TBY8 1022 aa13.45□□□□□ -0.26
ACTN1-203ENST00000394419 RARSP54136 660 aaKnown RBP13.45□□□□□ -0.26
ACTN1-203ENST00000394419 PDE3AQ14432 1141 aa13.45□□□□□ -0.26
ACTN1-203ENST00000394419 GSE1Q14687 1217 aa13.45□□□□□ -0.26
ACTN1-203ENST00000394419 ZNF521Q96K83 1311 aa13.44□□□□□ -0.26
ACTN1-203ENST00000394419 MFAP1P55081 439 aaKnown RBP13.44□□□□□ -0.26
ACTN1-203ENST00000394419 RLBP1P12271 317 aa13.44□□□□□ -0.26
ACTN1-203ENST00000394419 FBLN1P23142 703 aa13.44□□□□□ -0.26
ACTN1-203ENST00000394419 SEC24BO95487 1268 aa13.43□□□□□ -0.26
ACTN1-203ENST00000394419 EXOSC9Q06265 439 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms