RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 POLR1AO95602 1720 aaPredicted RBP18.82■□□□□ 0.6
SRSF5-201ENST00000394366 TMEM2Q9UHN6 1383 aa18.81■□□□□ 0.6
SRSF5-201ENST00000394366 MED14O60244 1454 aa18.81■□□□□ 0.6
SRSF5-201ENST00000394366 ARHGAP23Q9P227 1491 aa18.81■□□□□ 0.6
SRSF5-201ENST00000394366 SLIT1O75093 1534 aa18.81■□□□□ 0.6
SRSF5-201ENST00000394366 LTKP29376 864 aa18.81■□□□□ 0.6
SRSF5-201ENST00000394366 ADGRB3O60242 1522 aa18.8■□□□□ 0.6
SRSF5-201ENST00000394366 SCAF11Q99590 1463 aaKnown RBP18.8■□□□□ 0.6
SRSF5-201ENST00000394366 CHGAP10645 457 aaKnown RBP18.8■□□□□ 0.6
SRSF5-201ENST00000394366 NBPF8Q3BBV2 869 aa18.8■□□□□ 0.6
SRSF5-201ENST00000394366 ZNF335Q9H4Z2 1342 aaPredicted RBP18.79■□□□□ 0.6
SRSF5-201ENST00000394366 KDM5AP29375 1690 aaKnown RBP18.79■□□□□ 0.6
SRSF5-201ENST00000394366 RALGAPBQ86X10 1494 aa18.78■□□□□ 0.6
SRSF5-201ENST00000394366 ILDR1Q86SU0 546 aaPredicted RBP18.75■□□□□ 0.59
SRSF5-201ENST00000394366 STAC3Q96MF2 364 aa18.75■□□□□ 0.59
SRSF5-201ENST00000394366 LTBP4Q8N2S1 1624 aa18.75■□□□□ 0.59
SRSF5-201ENST00000394366 HSPA5P11021 654 aaKnown RBP18.74■□□□□ 0.59
SRSF5-201ENST00000394366 HDGFP51858 240 aaKnown RBP18.74■□□□□ 0.59
SRSF5-201ENST00000394366 FBXO41Q8TF61 875 aa18.74■□□□□ 0.59
SRSF5-201ENST00000394366 IQGAP1P46940 1657 aa18.74■□□□□ 0.59
SRSF5-201ENST00000394366 DCAF11Q8TEB1 546 aa18.73■□□□□ 0.59
SRSF5-201ENST00000394366 TMEM131LA2VDJ0 1609 aa18.73■□□□□ 0.59
SRSF5-201ENST00000394366 SPATA31E1Q6ZUB1 1445 aa18.72■□□□□ 0.59
SRSF5-201ENST00000394366 RIMS2Q9UQ26 1411 aa18.72■□□□□ 0.59
SRSF5-201ENST00000394366 MIER1Q8N108 512 aa18.71■□□□□ 0.59
SRSF5-201ENST00000394366 CLTCL1P53675 1640 aa18.71■□□□□ 0.59
SRSF5-201ENST00000394366 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.71■□□□□ 0.58
SRSF5-201ENST00000394366 PRAG1Q86YV5 1406 aa18.7■□□□□ 0.58
SRSF5-201ENST00000394366 BCANQ96GW7 911 aa18.7■□□□□ 0.58
SRSF5-201ENST00000394366 ZFYVE9O95405 1425 aa18.69■□□□□ 0.58
SRSF5-201ENST00000394366 ZNF326Q5BKZ1 582 aaKnown RBP18.69■□□□□ 0.58
SRSF5-201ENST00000394366 HIRIP3Q9BW71 556 aaPredicted RBP18.69■□□□□ 0.58
SRSF5-201ENST00000394366 TRPM1Q7Z4N2 1603 aa18.68■□□□□ 0.58
SRSF5-201ENST00000394366 MYO5BQ9ULV0 1848 aa18.67■□□□□ 0.58
SRSF5-201ENST00000394366 DDX10Q13206 875 aaKnown RBP18.67■□□□□ 0.58
SRSF5-201ENST00000394366 RGL3Q3MIN7 710 aa18.67■□□□□ 0.58
SRSF5-201ENST00000394366 NUTM2DQ5VT03 806 aaPredicted RBP18.67■□□□□ 0.58
SRSF5-201ENST00000394366 KDM2AQ9Y2K7 1162 aa18.67■□□□□ 0.58
SRSF5-201ENST00000394366 LAMC1P11047 1609 aa18.67■□□□□ 0.58
SRSF5-201ENST00000394366 USP47Q96K76 1375 aa18.66■□□□□ 0.58
SRSF5-201ENST00000394366 KIF1BO60333 1816 aa18.66■□□□□ 0.58
SRSF5-201ENST00000394366 SLC26A8Q96RN1 970 aa18.66■□□□□ 0.58
SRSF5-201ENST00000394366 SENP3Q9H4L4 574 aaPredicted RBP18.66■□□□□ 0.58
SRSF5-201ENST00000394366 CPS1P31327 1500 aa18.66■□□□□ 0.58
SRSF5-201ENST00000394366 PLEKHG1Q9ULL1 1385 aa18.65■□□□□ 0.58
SRSF5-201ENST00000394366 IQSEC2Q5JU85 1478 aa18.65■□□□□ 0.58
SRSF5-201ENST00000394366 CARD11Q9BXL7 1154 aa18.63■□□□□ 0.57
SRSF5-201ENST00000394366 ROCK2O75116 1388 aaKnown RBP18.63■□□□□ 0.57
SRSF5-201ENST00000394366 GPRASP1Q5JY77 1395 aa18.63■□□□□ 0.57
SRSF5-201ENST00000394366 WASHC2AQ641Q2 1341 aa18.6■□□□□ 0.57
SRSF5-201ENST00000394366 CCDC7Q96M83 1385 aa18.6■□□□□ 0.57
SRSF5-201ENST00000394366 KCNA6P17658 529 aa18.59■□□□□ 0.57
SRSF5-201ENST00000394366 TBX22Q9Y458 520 aa18.59■□□□□ 0.57
SRSF5-201ENST00000394366 MYOM2P54296 1465 aa18.58■□□□□ 0.57
SRSF5-201ENST00000394366 UBAP1LF5GYI3 381 aa18.56■□□□□ 0.56
SRSF5-201ENST00000394366 KIAA1210Q9ULL0 1709 aa18.56■□□□□ 0.56
SRSF5-201ENST00000394366 STRCP1A6NGW2 1772 aa18.56■□□□□ 0.56
SRSF5-201ENST00000394366 RPGRIP1LQ68CZ1 1315 aa18.56■□□□□ 0.56
SRSF5-201ENST00000394366 LRRC7Q96NW7 1537 aa18.56■□□□□ 0.56
SRSF5-201ENST00000394366 ADAMTS13Q76LX8 1427 aa18.55■□□□□ 0.56
SRSF5-201ENST00000394366 IFT172Q9UG01 1749 aa18.55■□□□□ 0.56
SRSF5-201ENST00000394366 ANP32CO43423 234 aa18.55■□□□□ 0.56
SRSF5-201ENST00000394366 NEXMIFQ5QGS0 1516 aa18.54■□□□□ 0.56
SRSF5-201ENST00000394366 VGFO15240 615 aaPredicted RBP18.54■□□□□ 0.56
SRSF5-201ENST00000394366 CENPBP07199 599 aaPredicted RBP18.53■□□□□ 0.56
SRSF5-201ENST00000394366 KIF7Q2M1P5 1343 aa18.52■□□□□ 0.56
SRSF5-201ENST00000394366 TOM1O60784 492 aa18.52■□□□□ 0.55
SRSF5-201ENST00000394366 PROSER2Q86WR7 435 aaPredicted RBP18.52■□□□□ 0.55
SRSF5-201ENST00000394366 DIP2AQ14689 1571 aa18.52■□□□□ 0.55
SRSF5-201ENST00000394366 PIK3R4Q99570 1358 aa18.5■□□□□ 0.55
SRSF5-201ENST00000394366 SETBP1Q9Y6X0 1596 aa18.5■□□□□ 0.55
SRSF5-201ENST00000394366 NRXN1Q9ULB1 1477 aa18.49■□□□□ 0.55
SRSF5-201ENST00000394366 TMEM94Q12767 1356 aa18.49■□□□□ 0.55
SRSF5-201ENST00000394366 C11orf95C9JLR9 678 aaPredicted RBP18.49■□□□□ 0.55
SRSF5-201ENST00000394366 CCER2I3L3R5 266 aa18.49■□□□□ 0.55
SRSF5-201ENST00000394366 NWD1Q149M9 1564 aa18.48■□□□□ 0.55
SRSF5-201ENST00000394366 NKTRP30414 1462 aaKnown RBP18.48■□□□□ 0.55
SRSF5-201ENST00000394366 ST20-MTHFSA0A0A6YYL1 179 aa18.48■□□□□ 0.55
SRSF5-201ENST00000394366 NBPF1Q3BBV0 1214 aa18.48■□□□□ 0.55
SRSF5-201ENST00000394366 PPLO60437 1756 aa18.47■□□□□ 0.55
SRSF5-201ENST00000394366 RBM33Q96EV2 1170 aaKnown RBP18.47■□□□□ 0.55
SRSF5-201ENST00000394366 AMOTL2Q9Y2J4 779 aa18.47■□□□□ 0.55
SRSF5-201ENST00000394366 NRXN3Q9Y4C0 1643 aa18.46■□□□□ 0.55
SRSF5-201ENST00000394366 PIP4K2BP78356 416 aa18.45■□□□□ 0.54
SRSF5-201ENST00000394366 SCAF1Q9H7N4 1312 aaKnown RBP18.45■□□□□ 0.54
SRSF5-201ENST00000394366 CHD2O14647 1828 aaKnown RBP18.45■□□□□ 0.54
SRSF5-201ENST00000394366 METP08581 1390 aa18.44■□□□□ 0.54
SRSF5-201ENST00000394366 EIF3AQ14152 1382 aaKnown RBP18.44■□□□□ 0.54
SRSF5-201ENST00000394366 ADGRF5Q8IZF2 1346 aa18.44■□□□□ 0.54
SRSF5-201ENST00000394366 PTPRUQ92729 1446 aa18.44■□□□□ 0.54
SRSF5-201ENST00000394366 SLC24A1O60721 1099 aa18.42■□□□□ 0.54
SRSF5-201ENST00000394366 PIK3C2GO75747 1445 aa18.4■□□□□ 0.54
SRSF5-201ENST00000394366 MSH6P52701 1360 aa18.4■□□□□ 0.54
SRSF5-201ENST00000394366 C14orf37Q86TY3 774 aa18.4■□□□□ 0.54
SRSF5-201ENST00000394366 XIRP1Q702N8 1843 aaKnown RBP18.4■□□□□ 0.54
SRSF5-201ENST00000394366 NCOA3Q9Y6Q9 1424 aa18.39■□□□□ 0.53
SRSF5-201ENST00000394366 ALKQ9UM73 1620 aa18.39■□□□□ 0.53
SRSF5-201ENST00000394366 TMF1P82094 1093 aa18.38■□□□□ 0.53
SRSF5-201ENST00000394366 YTHDC1Q96MU7 727 aaKnown RBP18.38■□□□□ 0.53
SRSF5-201ENST00000394366 TESK2Q96S53 571 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms