RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 ATP10BO94823 1461 aa21.46■■□□□ 1.03
SIPA1-201ENST00000394224 MAGI1Q96QZ7 1491 aaPredicted RBP21.46■■□□□ 1.03
SIPA1-201ENST00000394224 WASHC2CQ9Y4E1 1318 aa21.45■■□□□ 1.03
SIPA1-201ENST00000394224 CARD14Q9BXL6 1004 aa21.45■■□□□ 1.02
SIPA1-201ENST00000394224 TCP11L2Q8N4U5 519 aa21.44■■□□□ 1.02
SIPA1-201ENST00000394224 UHRF1BP1Q6BDS2 1440 aa21.44■■□□□ 1.02
SIPA1-201ENST00000394224 A2MP01023 1474 aa21.43■■□□□ 1.02
SIPA1-201ENST00000394224 PDZRN3Q9UPQ7 1066 aa21.43■■□□□ 1.02
SIPA1-201ENST00000394224 ELL2O00472 640 aaPredicted RBP21.43■■□□□ 1.02
SIPA1-201ENST00000394224 BECN1Q14457 450 aa21.43■■□□□ 1.02
SIPA1-201ENST00000394224 WWC1Q8IX03 1113 aa21.43■■□□□ 1.02
SIPA1-201ENST00000394224 MAGI2Q86UL8 1455 aa21.43■■□□□ 1.02
SIPA1-201ENST00000394224 PANK2Q9BZ23 570 aa21.42■■□□□ 1.02
SIPA1-201ENST00000394224 GGT6Q6P531 493 aa21.42■■□□□ 1.02
SIPA1-201ENST00000394224 E9PSI1 815 aa21.41■■□□□ 1.02
SIPA1-201ENST00000394224 ITPRIPQ8IWB1 547 aa21.41■■□□□ 1.02
SIPA1-201ENST00000394224 FBLN1P23142 703 aa21.4■■□□□ 1.02
SIPA1-201ENST00000394224 MTHFSP49914 203 aa21.4■■□□□ 1.02
SIPA1-201ENST00000394224 NAP1L5Q96NT1 182 aaPredicted RBP21.4■■□□□ 1.02
SIPA1-201ENST00000394224 MRC2Q9UBG0 1479 aa21.4■■□□□ 1.02
SIPA1-201ENST00000394224 FAM135AQ9P2D6 1515 aa21.4■■□□□ 1.02
SIPA1-201ENST00000394224 PBRM1Q86U86 1689 aa21.39■■□□□ 1.02
SIPA1-201ENST00000394224 ADGRF5Q8IZF2 1346 aa21.39■■□□□ 1.01
SIPA1-201ENST00000394224 PLA2R1Q13018 1463 aa21.38■■□□□ 1.01
SIPA1-201ENST00000394224 TPRNQ4KMQ1 711 aa21.38■■□□□ 1.01
SIPA1-201ENST00000394224 CDCA8Q53HL2 280 aa21.38■■□□□ 1.01
SIPA1-201ENST00000394224 ZBTB7CA1YPR0 619 aa21.37■■□□□ 1.01
SIPA1-201ENST00000394224 HSP90AA1P07900 732 aaKnown RBP21.37■■□□□ 1.01
SIPA1-201ENST00000394224 ARHGAP5Q13017 1502 aa21.36■■□□□ 1.01
SIPA1-201ENST00000394224 SMC4Q9NTJ3 1288 aa21.35■■□□□ 1.01
SIPA1-201ENST00000394224 SPAG9O60271 1321 aaKnown RBP21.35■■□□□ 1.01
SIPA1-201ENST00000394224 TBC1D2Q9BYX2 928 aa21.35■■□□□ 1.01
SIPA1-201ENST00000394224 APBB1O00213 710 aa21.34■■□□□ 1.01
SIPA1-201ENST00000394224 C1orf115Q9H7X2 142 aa21.33■■□□□ 1
SIPA1-201ENST00000394224 COL17A1Q9UMD9 1497 aaPredicted RBP21.33■■□□□ 1
SIPA1-201ENST00000394224 USP19O94966 1318 aa21.33■■□□□ 1
SIPA1-201ENST00000394224 LNPKQ9C0E8 428 aa21.32■■□□□ 1
SIPA1-201ENST00000394224 BLMP54132 1417 aaPredicted RBP21.31■■□□□ 1
SIPA1-201ENST00000394224 RARSP54136 660 aaKnown RBP21.31■■□□□ 1
SIPA1-201ENST00000394224 GGNBP2Q9H3C7 697 aa21.31■■□□□ 1
SIPA1-201ENST00000394224 CABP2Q9NPB3 220 aa21.31■■□□□ 1
SIPA1-201ENST00000394224 RRAGDQ9NQL2 400 aaPredicted RBP21.31■■□□□ 1
SIPA1-201ENST00000394224 EFCAB2Q5VUJ9 269 aa21.3■■□□□ 1
SIPA1-201ENST00000394224 SYCP2Q9BX26 1530 aa21.3■■□□□ 1
SIPA1-201ENST00000394224 ADGRL2O95490 1459 aa21.29■■□□□ 1
SIPA1-201ENST00000394224 CGNL1Q0VF96 1302 aa21.29■■□□□ 1
SIPA1-201ENST00000394224 ARID3AQ99856 593 aa21.29■■□□□ 1
SIPA1-201ENST00000394224 ZNF521Q96K83 1311 aa21.29■■□□□ 1
SIPA1-201ENST00000394224 IFT140Q96RY7 1462 aa21.29■■□□□ 1
SIPA1-201ENST00000394224 CCDC141Q6ZP82 1450 aa21.28■■□□□ 1
SIPA1-201ENST00000394224 EXOSC9Q06265 439 aaKnown RBP21.27■■□□□ 1
SIPA1-201ENST00000394224 NKTRP30414 1462 aaKnown RBP21.26■□□□□ 0.99
SIPA1-201ENST00000394224 ZMYM4Q5VZL5 1548 aa21.26■□□□□ 0.99
SIPA1-201ENST00000394224 SRPK2P78362 688 aaKnown RBP21.25■□□□□ 0.99
SIPA1-201ENST00000394224 THUMPD2Q9BTF0 503 aaKnown RBP21.25■□□□□ 0.99
SIPA1-201ENST00000394224 RWDD1Q9H446 243 aaPredicted RBP21.24■□□□□ 0.99
SIPA1-201ENST00000394224 KDM5DQ9BY66 1539 aa21.24■□□□□ 0.99
SIPA1-201ENST00000394224 CEP170Q5SW79 1584 aa21.24■□□□□ 0.99
SIPA1-201ENST00000394224 GOLGA6L3A6NEY3 463 aa21.24■□□□□ 0.99
SIPA1-201ENST00000394224 NCLP19338 710 aaKnown RBP21.24■□□□□ 0.99
SIPA1-201ENST00000394224 C22orf23Q9BZE7 217 aa21.24■□□□□ 0.99
SIPA1-201ENST00000394224 ARHGEF12Q9NZN5 1544 aa21.23■□□□□ 0.99
SIPA1-201ENST00000394224 RSPH4AQ5TD94 716 aa21.22■□□□□ 0.99
SIPA1-201ENST00000394224 POLR1AO95602 1720 aaPredicted RBP21.22■□□□□ 0.99
SIPA1-201ENST00000394224 RUNDC1Q96C34 613 aa21.22■□□□□ 0.99
SIPA1-201ENST00000394224 MAPK8IP3Q9UPT6 1336 aa21.21■□□□□ 0.99
SIPA1-201ENST00000394224 FOXD4L5Q5VV16 416 aaPredicted RBP21.21■□□□□ 0.99
SIPA1-201ENST00000394224 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.21■□□□□ 0.99
SIPA1-201ENST00000394224 FOXD4L4Q8WXT5 416 aaPredicted RBP21.21■□□□□ 0.99
SIPA1-201ENST00000394224 SYNJ2O15056 1496 aa21.21■□□□□ 0.99
SIPA1-201ENST00000394224 WDR7Q9Y4E6 1490 aa21.21■□□□□ 0.99
SIPA1-201ENST00000394224 PMFBP1Q8TBY8 1022 aa21.21■□□□□ 0.99
SIPA1-201ENST00000394224 XRCC6P12956 609 aaKnown RBP eCLIP21.2■□□□□ 0.98
SIPA1-201ENST00000394224 DZIP1LQ8IYY4 767 aaKnown RBP21.2■□□□□ 0.98
SIPA1-201ENST00000394224 PDE3AQ14432 1141 aa21.2■□□□□ 0.98
SIPA1-201ENST00000394224 CFAP53Q96M91 514 aa21.2■□□□□ 0.98
SIPA1-201ENST00000394224 ABCC10Q5T3U5 1492 aa21.19■□□□□ 0.98
SIPA1-201ENST00000394224 SOX12O15370 315 aa21.19■□□□□ 0.98
SIPA1-201ENST00000394224 NOB1Q9ULX3 412 aaKnown RBP21.19■□□□□ 0.98
SIPA1-201ENST00000394224 HSP90AB1P08238 724 aaKnown RBP21.19■□□□□ 0.98
SIPA1-201ENST00000394224 EIF4G3O43432 1585 aaKnown RBP21.18■□□□□ 0.98
SIPA1-201ENST00000394224 RBM42Q9BTD8 480 aaKnown RBP21.18■□□□□ 0.98
SIPA1-201ENST00000394224 ITSN2Q9NZM3 1697 aa21.18■□□□□ 0.98
SIPA1-201ENST00000394224 TRAK2O60296 914 aa21.18■□□□□ 0.98
SIPA1-201ENST00000394224 NSD3Q9BZ95 1437 aa21.18■□□□□ 0.98
SIPA1-201ENST00000394224 HMOX1P09601 288 aa21.17■□□□□ 0.98
SIPA1-201ENST00000394224 ZKSCAN2Q63HK3 967 aa21.17■□□□□ 0.98
SIPA1-201ENST00000394224 HSCBQ8IWL3 235 aa21.17■□□□□ 0.98
SIPA1-201ENST00000394224 SSH1Q8WYL5 1049 aa21.17■□□□□ 0.98
SIPA1-201ENST00000394224 TRAPPC8Q9Y2L5 1435 aa21.17■□□□□ 0.98
SIPA1-201ENST00000394224 MINK1Q8N4C8 1332 aaPredicted RBP21.16■□□□□ 0.98
SIPA1-201ENST00000394224 ANKRD45Q5TZF3 282 aa21.16■□□□□ 0.98
SIPA1-201ENST00000394224 ADGBQ8N7X0 1667 aa21.16■□□□□ 0.98
SIPA1-201ENST00000394224 TBC1D32Q96NH3 1257 aa21.16■□□□□ 0.98
SIPA1-201ENST00000394224 GPRASP1Q5JY77 1395 aa21.15■□□□□ 0.98
SIPA1-201ENST00000394224 MCM4P33991 863 aa21.15■□□□□ 0.98
SIPA1-201ENST00000394224 PNNQ9H307 717 aaKnown RBP21.15■□□□□ 0.98
SIPA1-201ENST00000394224 TRIM27P14373 513 aa21.15■□□□□ 0.98
SIPA1-201ENST00000394224 TRMT2AQ8IZ69 625 aaKnown RBP21.15■□□□□ 0.98
SIPA1-201ENST00000394224 TMEM57Q8N5G2 664 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms